EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001146 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 104957 bases
Position: chrGeneScaffold_2612:5565-110521
Accession: 20368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001136	zf-CCCH	PF00642.24	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001208	ZC3H13-201	4968	-	ENSPCAP00000001136	1655 (aa)	-	UPI00018B05F7

Gene Model

Click here to download ENSPCAG00000001146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001146	ZC3H13	77	95.161	ENSG00000123200	ZC3H13	98	98.230	Homo_sapiens
ENSPCAG00000001146	ZC3H13	65	68.696	ENSAPOG00000001116	zc3h13	71	69.130	Acanthochromis_polyacanthus
ENSPCAG00000001146	ZC3H13	77	93.173	ENSAMEG00000013117	ZC3H13	77	94.779	Ailuropoda_melanoleuca
ENSPCAG00000001146	ZC3H13	71	62.637	ENSACIG00000001200	zc3h13	70	68.261	Amphilophus_citrinellus
ENSPCAG00000001146	ZC3H13	68	68.996	ENSAPEG00000004887	zc3h13	61	69.697	Amphiprion_percula
ENSPCAG00000001146	ZC3H13	70	63.111	ENSATEG00000003937	zc3h13	66	67.901	Anabas_testudineus
ENSPCAG00000001146	ZC3H13	80	86.345	ENSAPLG00000002707	ZC3H13	90	79.775	Anas_platyrhynchos
ENSPCAG00000001146	ZC3H13	77	94.758	ENSANAG00000033079	ZC3H13	77	96.774	Aotus_nancymaae
ENSPCAG00000001146	ZC3H13	72	61.232	ENSACLG00000027909	zc3h13	63	64.364	Astatotilapia_calliptera
ENSPCAG00000001146	ZC3H13	77	93.952	ENSCJAG00000016756	ZC3H13	77	95.968	Callithrix_jacchus
ENSPCAG00000001146	ZC3H13	77	93.574	ENSCAFG00000004511	ZC3H13	77	95.181	Canis_familiaris
ENSPCAG00000001146	ZC3H13	77	93.574	ENSCAFG00020019269	ZC3H13	82	97.590	Canis_lupus_dingo
ENSPCAG00000001146	ZC3H13	77	92.771	ENSCHIG00000020072	ZC3H13	78	94.378	Capra_hircus
ENSPCAG00000001146	ZC3H13	77	93.233	ENSTSYG00000000992	ZC3H13	77	94.779	Carlito_syrichta
ENSPCAG00000001146	ZC3H13	77	93.952	ENSCPOG00000000646	ZC3H13	77	95.968	Cavia_porcellus
ENSPCAG00000001146	ZC3H13	71	98.658	ENSCCAG00000032728	ZC3H13	73	98.658	Cebus_capucinus
ENSPCAG00000001146	ZC3H13	67	94.758	ENSCATG00000041075	ZC3H13	77	96.774	Cercocebus_atys
ENSPCAG00000001146	ZC3H13	77	94.355	ENSCLAG00000000610	ZC3H13	78	96.371	Chinchilla_lanigera
ENSPCAG00000001146	ZC3H13	67	94.758	ENSCSAG00000017764	ZC3H13	77	96.774	Chlorocebus_sabaeus
ENSPCAG00000001146	ZC3H13	69	94.690	ENSCHOG00000009724	ZC3H13	72	94.690	Choloepus_hoffmanni
ENSPCAG00000001146	ZC3H13	77	95.161	ENSCANG00000037422	ZC3H13	77	97.177	Colobus_angolensis_palliatus
ENSPCAG00000001146	ZC3H13	76	89.919	ENSCGRG00001014490	Zc3h13	75	91.935	Cricetulus_griseus_chok1gshd
ENSPCAG00000001146	ZC3H13	76	89.919	ENSCGRG00000002575	Zc3h13	75	91.935	Cricetulus_griseus_crigri
ENSPCAG00000001146	ZC3H13	73	63.406	ENSCSEG00000010275	zc3h13	67	65.833	Cynoglossus_semilaevis
ENSPCAG00000001146	ZC3H13	68	62.719	ENSCVAG00000014663	zc3h13	61	62.656	Cyprinodon_variegatus
ENSPCAG00000001146	ZC3H13	72	72.464	ENSDARG00000037177	zc3h13	63	69.099	Danio_rerio
ENSPCAG00000001146	ZC3H13	77	91.566	ENSDNOG00000005390	ZC3H13	77	93.173	Dasypus_novemcinctus
ENSPCAG00000001146	ZC3H13	77	93.522	ENSDORG00000000600	Zc3h13	77	93.522	Dipodomys_ordii
ENSPCAG00000001146	ZC3H13	77	93.574	ENSEASG00005017100	ZC3H13	77	95.181	Equus_asinus_asinus
ENSPCAG00000001146	ZC3H13	77	93.574	ENSECAG00000022843	ZC3H13	85	95.181	Equus_caballus
ENSPCAG00000001146	ZC3H13	77	93.173	ENSFCAG00000004877	ZC3H13	82	94.779	Felis_catus
ENSPCAG00000001146	ZC3H13	76	86.345	ENSFALG00000008196	ZC3H13	73	88.353	Ficedula_albicollis
ENSPCAG00000001146	ZC3H13	77	93.952	ENSFDAG00000012323	ZC3H13	78	95.968	Fukomys_damarensis
ENSPCAG00000001146	ZC3H13	75	86.345	ENSGALG00000016984	ZC3H13	74	88.353	Gallus_gallus
ENSPCAG00000001146	ZC3H13	69	66.304	ENSGAFG00000005462	zc3h13	62	66.079	Gambusia_affinis
ENSPCAG00000001146	ZC3H13	67	69.796	ENSGACG00000015166	zc3h13	52	69.796	Gasterosteus_aculeatus
ENSPCAG00000001146	ZC3H13	77	95.161	ENSGGOG00000005496	ZC3H13	78	97.177	Gorilla_gorilla
ENSPCAG00000001146	ZC3H13	72	61.232	ENSHBUG00000007100	zc3h13	63	64.364	Haplochromis_burtoni
ENSPCAG00000001146	ZC3H13	77	93.952	ENSHGLG00000006309	ZC3H13	77	95.968	Heterocephalus_glaber_female
ENSPCAG00000001146	ZC3H13	77	93.952	ENSHGLG00100007460	ZC3H13	77	95.968	Heterocephalus_glaber_male
ENSPCAG00000001146	ZC3H13	74	70.042	ENSIPUG00000021878	zc3h13	64	73.733	Ictalurus_punctatus
ENSPCAG00000001146	ZC3H13	77	93.952	ENSSTOG00000029682	ZC3H13	77	95.968	Ictidomys_tridecemlineatus
ENSPCAG00000001146	ZC3H13	77	91.532	ENSJJAG00000019971	Zc3h13	77	93.548	Jaculus_jaculus
ENSPCAG00000001146	ZC3H13	54	66.275	ENSKMAG00000010701	zc3h13	76	70.089	Kryptolebias_marmoratus
ENSPCAG00000001146	ZC3H13	66	78.543	ENSLACG00000003806	ZC3H13	76	78.543	Latimeria_chalumnae
ENSPCAG00000001146	ZC3H13	67	94.758	ENSMFAG00000004060	ZC3H13	77	96.774	Macaca_fascicularis
ENSPCAG00000001146	ZC3H13	70	94.758	ENSMMUG00000017025	ZC3H13	82	96.774	Macaca_mulatta
ENSPCAG00000001146	ZC3H13	67	94.758	ENSMNEG00000044356	ZC3H13	77	96.774	Macaca_nemestrina
ENSPCAG00000001146	ZC3H13	67	94.758	ENSMLEG00000039387	ZC3H13	81	96.774	Mandrillus_leucophaeus
ENSPCAG00000001146	ZC3H13	73	64.576	ENSMAMG00000022274	zc3h13	66	69.604	Mastacembelus_armatus
ENSPCAG00000001146	ZC3H13	72	61.232	ENSMZEG00005007473	zc3h13	63	64.364	Maylandia_zebra
ENSPCAG00000001146	ZC3H13	77	85.259	ENSMGAG00000014996	ZC3H13	77	87.251	Meleagris_gallopavo
ENSPCAG00000001146	ZC3H13	77	94.355	ENSMICG00000014772	ZC3H13	77	96.371	Microcebus_murinus
ENSPCAG00000001146	ZC3H13	77	88.755	ENSMODG00000014969	ZC3H13	52	90.361	Monodelphis_domestica
ENSPCAG00000001146	ZC3H13	72	63.850	ENSMALG00000010585	zc3h13	54	67.982	Monopterus_albus
ENSPCAG00000001146	ZC3H13	65	91.791	MGP_CAROLIEiJ_G0019512	Zc3h13	76	90.323	Mus_caroli
ENSPCAG00000001146	ZC3H13	65	91.045	ENSMUSG00000022000	Zc3h13	76	90.726	Mus_musculus
ENSPCAG00000001146	ZC3H13	76	88.710	MGP_PahariEiJ_G0030530	Zc3h13	76	90.726	Mus_pahari
ENSPCAG00000001146	ZC3H13	65	91.791	MGP_SPRETEiJ_G0020407	Zc3h13	76	90.726	Mus_spretus
ENSPCAG00000001146	ZC3H13	57	93.976	ENSMPUG00000001602	ZC3H13	82	95.582	Mustela_putorius_furo
ENSPCAG00000001146	ZC3H13	77	91.968	ENSMLUG00000006920	ZC3H13	78	93.574	Myotis_lucifugus
ENSPCAG00000001146	ZC3H13	77	89.516	ENSNGAG00000002157	Zc3h13	77	91.129	Nannospalax_galili
ENSPCAG00000001146	ZC3H13	77	95.161	ENSNLEG00000002498	ZC3H13	77	97.177	Nomascus_leucogenys
ENSPCAG00000001146	ZC3H13	77	95.547	ENSODEG00000005178	ZC3H13	78	95.547	Octodon_degus
ENSPCAG00000001146	ZC3H13	69	70.492	ENSONIG00000012236	zc3h13	69	76.667	Oreochromis_niloticus
ENSPCAG00000001146	ZC3H13	81	85.768	ENSOANG00000015580	ZC3H13	74	86.415	Ornithorhynchus_anatinus
ENSPCAG00000001146	ZC3H13	76	92.369	ENSOCUG00000015173	ZC3H13	77	92.400	Oryctolagus_cuniculus
ENSPCAG00000001146	ZC3H13	73	61.194	ENSORLG00000005201	zc3h13	71	64.876	Oryzias_latipes
ENSPCAG00000001146	ZC3H13	71	62.727	ENSORLG00020016576	zc3h13	70	64.876	Oryzias_latipes_hni
ENSPCAG00000001146	ZC3H13	73	61.567	ENSORLG00015014966	zc3h13	75	64.876	Oryzias_latipes_hsok
ENSPCAG00000001146	ZC3H13	70	63.258	ENSOMEG00000007044	zc3h13	71	68.261	Oryzias_melastigma
ENSPCAG00000001146	ZC3H13	77	95.565	ENSOGAG00000012032	ZC3H13	78	97.581	Otolemur_garnettii
ENSPCAG00000001146	ZC3H13	77	92.771	ENSOARG00000007790	ZC3H13	77	94.378	Ovis_aries
ENSPCAG00000001146	ZC3H13	77	95.161	ENSPPAG00000034465	ZC3H13	78	97.177	Pan_paniscus
ENSPCAG00000001146	ZC3H13	77	93.173	ENSPPRG00000005440	ZC3H13	77	94.779	Panthera_pardus
ENSPCAG00000001146	ZC3H13	77	93.173	ENSPTIG00000014867	ZC3H13	77	94.779	Panthera_tigris_altaica
ENSPCAG00000001146	ZC3H13	77	95.161	ENSPTRG00000005851	ZC3H13	77	97.177	Pan_troglodytes
ENSPCAG00000001146	ZC3H13	67	94.758	ENSPANG00000014127	ZC3H13	77	96.774	Papio_anubis
ENSPCAG00000001146	ZC3H13	74	91.964	ENSPCIG00000029529	ZC3H13	68	91.964	Phascolarctos_cinereus
ENSPCAG00000001146	ZC3H13	67	60.741	ENSPFOG00000005039	zc3h13	64	66.079	Poecilia_formosa
ENSPCAG00000001146	ZC3H13	65	60.558	ENSPLAG00000014095	zc3h13	61	65.639	Poecilia_latipinna
ENSPCAG00000001146	ZC3H13	66	60.741	ENSPMEG00000006928	zc3h13	64	66.079	Poecilia_mexicana
ENSPCAG00000001146	ZC3H13	62	60.741	ENSPREG00000010526	zc3h13	60	66.079	Poecilia_reticulata
ENSPCAG00000001146	ZC3H13	65	97.838	ENSPVAG00000012353	ZC3H13	66	97.959	Pteropus_vampyrus
ENSPCAG00000001146	ZC3H13	70	61.455	ENSPNYG00000016000	zc3h13	73	64.599	Pundamilia_nyererei
ENSPCAG00000001146	ZC3H13	65	72.115	ENSPNAG00000011008	zc3h13	60	74.038	Pygocentrus_nattereri
ENSPCAG00000001146	ZC3H13	65	90.299	ENSRNOG00000011237	Zc3h13	76	88.664	Rattus_norvegicus
ENSPCAG00000001146	ZC3H13	77	95.161	ENSRBIG00000010463	ZC3H13	78	97.177	Rhinopithecus_bieti
ENSPCAG00000001146	ZC3H13	77	95.161	ENSSBOG00000027228	ZC3H13	78	97.177	Saimiri_boliviensis_boliviensis
ENSPCAG00000001146	ZC3H13	69	62.909	ENSSMAG00000007110	zc3h13	63	66.529	Scophthalmus_maximus
ENSPCAG00000001146	ZC3H13	68	62.132	ENSSDUG00000021808	zc3h13	61	67.782	Seriola_dumerili
ENSPCAG00000001146	ZC3H13	72	94.915	ENSSARG00000007106	ZC3H13	72	94.915	Sorex_araneus
ENSPCAG00000001146	ZC3H13	70	85.887	ENSSPUG00000013358	ZC3H13	70	87.903	Sphenodon_punctatus
ENSPCAG00000001146	ZC3H13	66	68.670	ENSSPAG00000019966	zc3h13	70	69.099	Stegastes_partitus
ENSPCAG00000001146	ZC3H13	77	93.173	ENSSSCG00000009414	ZC3H13	78	94.779	Sus_scrofa
ENSPCAG00000001146	ZC3H13	71	63.178	ENSTNIG00000014523	zc3h13	72	69.027	Tetraodon_nigroviridis
ENSPCAG00000001146	ZC3H13	77	92.262	ENSTTRG00000003611	ZC3H13	78	92.262	Tursiops_truncatus
ENSPCAG00000001146	ZC3H13	77	93.173	ENSUMAG00000016220	ZC3H13	81	94.779	Ursus_maritimus
ENSPCAG00000001146	ZC3H13	72	91.026	ENSVPAG00000005179	ZC3H13	72	90.909	Vicugna_pacos
ENSPCAG00000001146	ZC3H13	77	95.161	ENSVVUG00000028395	ZC3H13	82	97.177	Vulpes_vulpes
ENSPCAG00000001146	ZC3H13	76	78.543	ENSXETG00000014637	zc3h13	79	78.543	Xenopus_tropicalis
ENSPCAG00000001146	ZC3H13	77	60.662	ENSXMAG00000012423	zc3h13	69	63.750	Xiphophorus_maculatus