EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001182 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 25049 bases
Position: chrGeneScaffold_1049:21574-46622
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001102	zf-C3HC	PF07967.13	1.2e-36	1	1
ENSPCAP00000001102	Rsm1	PF08600.10	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001168	ZC3HC1-201	1377	-	ENSPCAP00000001102	458 (aa)	-	UPI00018B0814

Gene Model

Click here to download ENSPCAG00000001182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001182	ZC3HC1	99	86.492	ENSG00000091732	ZC3HC1	94	86.726	Homo_sapiens
ENSPCAG00000001182	ZC3HC1	94	45.212	ENSAPOG00000009078	zc3hc1	87	44.346	Acanthochromis_polyacanthus
ENSPCAG00000001182	ZC3HC1	100	84.848	ENSAMEG00000005425	ZC3HC1	92	84.848	Ailuropoda_melanoleuca
ENSPCAG00000001182	ZC3HC1	94	43.956	ENSACIG00000019513	zc3hc1	87	43.326	Amphilophus_citrinellus
ENSPCAG00000001182	ZC3HC1	98	44.937	ENSAOCG00000024310	zc3hc1	91	44.118	Amphiprion_ocellaris
ENSPCAG00000001182	ZC3HC1	98	44.937	ENSAPEG00000004907	zc3hc1	91	44.118	Amphiprion_percula
ENSPCAG00000001182	ZC3HC1	89	45.667	ENSATEG00000016898	zc3hc1	86	44.755	Anabas_testudineus
ENSPCAG00000001182	ZC3HC1	96	61.573	ENSAPLG00000003832	ZC3HC1	99	61.573	Anas_platyrhynchos
ENSPCAG00000001182	ZC3HC1	100	61.915	ENSACAG00000001638	ZC3HC1	92	61.915	Anolis_carolinensis
ENSPCAG00000001182	ZC3HC1	100	84.599	ENSANAG00000022213	ZC3HC1	98	85.922	Aotus_nancymaae
ENSPCAG00000001182	ZC3HC1	94	44.420	ENSACLG00000025033	zc3hc1	94	43.556	Astatotilapia_calliptera
ENSPCAG00000001182	ZC3HC1	97	43.612	ENSAMXG00000036792	zc3hc1	92	43.392	Astyanax_mexicanus
ENSPCAG00000001182	ZC3HC1	100	85.000	ENSBTAG00000011247	ZC3HC1	92	85.000	Bos_taurus
ENSPCAG00000001182	ZC3HC1	100	85.000	ENSCJAG00000010536	ZC3HC1	98	85.922	Callithrix_jacchus
ENSPCAG00000001182	ZC3HC1	100	84.665	ENSCAFG00000001499	-	90	84.665	Canis_familiaris
ENSPCAG00000001182	ZC3HC1	100	85.000	ENSCAFG00000028735	-	92	85.000	Canis_familiaris
ENSPCAG00000001182	ZC3HC1	100	85.000	ENSCAFG00000029401	-	90	85.000	Canis_familiaris
ENSPCAG00000001182	ZC3HC1	100	85.217	ENSCAFG00000031850	-	92	85.217	Canis_familiaris
ENSPCAG00000001182	ZC3HC1	100	85.000	ENSCAFG00020006829	-	92	85.000	Canis_lupus_dingo
ENSPCAG00000001182	ZC3HC1	100	83.550	ENSCAFG00020023333	-	92	83.550	Canis_lupus_dingo
ENSPCAG00000001182	ZC3HC1	100	77.174	ENSCHIG00000014103	ZC3HC1	91	77.174	Capra_hircus
ENSPCAG00000001182	ZC3HC1	100	84.130	ENSTSYG00000002843	ZC3HC1	92	84.130	Carlito_syrichta
ENSPCAG00000001182	ZC3HC1	98	60.917	ENSCAPG00000016300	ZC3HC1	93	71.429	Cavia_aperea
ENSPCAG00000001182	ZC3HC1	100	80.217	ENSCPOG00000014034	ZC3HC1	92	79.783	Cavia_porcellus
ENSPCAG00000001182	ZC3HC1	100	67.391	ENSCCAG00000020384	ZC3HC1	99	85.990	Cebus_capucinus
ENSPCAG00000001182	ZC3HC1	100	86.739	ENSCATG00000023130	ZC3HC1	97	85.792	Cercocebus_atys
ENSPCAG00000001182	ZC3HC1	90	63.592	ENSCLAG00000008260	ZC3HC1	88	63.592	Chinchilla_lanigera
ENSPCAG00000001182	ZC3HC1	79	86.612	ENSCSAG00000009881	ZC3HC1	97	86.612	Chlorocebus_sabaeus
ENSPCAG00000001182	ZC3HC1	98	84.701	ENSCHOG00000011846	ZC3HC1	99	84.701	Choloepus_hoffmanni
ENSPCAG00000001182	ZC3HC1	99	65.142	ENSCPBG00000017519	ZC3HC1	92	65.142	Chrysemys_picta_bellii
ENSPCAG00000001182	ZC3HC1	100	86.522	ENSCANG00000029091	ZC3HC1	98	86.893	Colobus_angolensis_palliatus
ENSPCAG00000001182	ZC3HC1	100	81.522	ENSCGRG00001018805	Zc3hc1	92	81.522	Cricetulus_griseus_chok1gshd
ENSPCAG00000001182	ZC3HC1	100	80.217	ENSCGRG00000017114	Zc3hc1	92	80.217	Cricetulus_griseus_crigri
ENSPCAG00000001182	ZC3HC1	99	43.396	ENSCSEG00000009284	zc3hc1	90	42.977	Cynoglossus_semilaevis
ENSPCAG00000001182	ZC3HC1	93	43.392	ENSCVAG00000011566	zc3hc1	86	42.731	Cyprinodon_variegatus
ENSPCAG00000001182	ZC3HC1	93	48.299	ENSDARG00000062651	zc3hc1	86	47.619	Danio_rerio
ENSPCAG00000001182	ZC3HC1	100	83.696	ENSDNOG00000045016	ZC3HC1	92	83.696	Dasypus_novemcinctus
ENSPCAG00000001182	ZC3HC1	90	81.010	ENSDORG00000008697	Zc3hc1	90	81.010	Dipodomys_ordii
ENSPCAG00000001182	ZC3HC1	98	85.619	ENSEASG00005008789	ZC3HC1	97	85.619	Equus_asinus_asinus
ENSPCAG00000001182	ZC3HC1	100	85.033	ENSECAG00000017886	ZC3HC1	92	85.033	Equus_caballus
ENSPCAG00000001182	ZC3HC1	72	79.630	ENSEEUG00000003123	ZC3HC1	67	79.630	Erinaceus_europaeus
ENSPCAG00000001182	ZC3HC1	93	44.124	ENSELUG00000023168	zc3hc1	87	44.934	Esox_lucius
ENSPCAG00000001182	ZC3HC1	100	84.565	ENSFCAG00000010429	ZC3HC1	96	83.664	Felis_catus
ENSPCAG00000001182	ZC3HC1	98	59.615	ENSFALG00000005006	ZC3HC1	100	59.615	Ficedula_albicollis
ENSPCAG00000001182	ZC3HC1	100	83.696	ENSFDAG00000019897	ZC3HC1	92	83.696	Fukomys_damarensis
ENSPCAG00000001182	ZC3HC1	94	43.736	ENSFHEG00000020149	zc3hc1	87	42.699	Fundulus_heteroclitus
ENSPCAG00000001182	ZC3HC1	96	42.232	ENSGMOG00000002914	zc3hc1	91	41.886	Gadus_morhua
ENSPCAG00000001182	ZC3HC1	99	62.664	ENSGALG00000008003	ZC3HC1	92	62.664	Gallus_gallus
ENSPCAG00000001182	ZC3HC1	95	44.248	ENSGAFG00000016095	zc3hc1	88	43.612	Gambusia_affinis
ENSPCAG00000001182	ZC3HC1	97	45.148	ENSGACG00000019706	zc3hc1	93	44.748	Gasterosteus_aculeatus
ENSPCAG00000001182	ZC3HC1	84	65.473	ENSGAGG00000016106	ZC3HC1	100	65.473	Gopherus_agassizii
ENSPCAG00000001182	ZC3HC1	99	86.275	ENSGGOG00000015504	ZC3HC1	98	87.805	Gorilla_gorilla
ENSPCAG00000001182	ZC3HC1	94	44.866	ENSHBUG00000008347	zc3hc1	87	44.000	Haplochromis_burtoni
ENSPCAG00000001182	ZC3HC1	100	84.348	ENSHGLG00000005085	ZC3HC1	92	84.348	Heterocephalus_glaber_female
ENSPCAG00000001182	ZC3HC1	100	84.130	ENSHGLG00100011395	ZC3HC1	92	84.130	Heterocephalus_glaber_male
ENSPCAG00000001182	ZC3HC1	93	44.292	ENSHCOG00000014309	zc3hc1	86	43.280	Hippocampus_comes
ENSPCAG00000001182	ZC3HC1	99	83.736	ENSSTOG00000023599	-	91	83.736	Ictidomys_tridecemlineatus
ENSPCAG00000001182	ZC3HC1	94	45.815	ENSKMAG00000015315	zc3hc1	81	44.714	Kryptolebias_marmoratus
ENSPCAG00000001182	ZC3HC1	93	44.543	ENSLBEG00000017325	zc3hc1	92	44.124	Labrus_bergylta
ENSPCAG00000001182	ZC3HC1	76	57.609	ENSLACG00000013032	ZC3HC1	86	56.183	Latimeria_chalumnae
ENSPCAG00000001182	ZC3HC1	93	52.727	ENSLOCG00000015963	zc3hc1	87	52.834	Lepisosteus_oculatus
ENSPCAG00000001182	ZC3HC1	100	87.879	ENSLAFG00000001292	ZC3HC1	92	87.879	Loxodonta_africana
ENSPCAG00000001182	ZC3HC1	100	86.957	ENSMFAG00000030176	ZC3HC1	97	86.027	Macaca_fascicularis
ENSPCAG00000001182	ZC3HC1	100	85.900	ENSMMUG00000006155	ZC3HC1	99	86.538	Macaca_mulatta
ENSPCAG00000001182	ZC3HC1	100	87.174	ENSMNEG00000011833	ZC3HC1	99	86.190	Macaca_nemestrina
ENSPCAG00000001182	ZC3HC1	100	86.957	ENSMLEG00000027328	ZC3HC1	98	87.379	Mandrillus_leucophaeus
ENSPCAG00000001182	ZC3HC1	94	44.543	ENSMAMG00000010691	zc3hc1	87	43.902	Mastacembelus_armatus
ENSPCAG00000001182	ZC3HC1	94	44.643	ENSMZEG00005007142	zc3hc1	87	43.778	Maylandia_zebra
ENSPCAG00000001182	ZC3HC1	99	62.609	ENSMGAG00000002977	ZC3HC1	92	63.261	Meleagris_gallopavo
ENSPCAG00000001182	ZC3HC1	89	75.904	ENSMAUG00000017032	Zc3hc1	92	75.904	Mesocricetus_auratus
ENSPCAG00000001182	ZC3HC1	100	84.565	ENSMICG00000009167	ZC3HC1	92	84.565	Microcebus_murinus
ENSPCAG00000001182	ZC3HC1	100	80.000	ENSMOCG00000015239	Zc3hc1	92	80.000	Microtus_ochrogaster
ENSPCAG00000001182	ZC3HC1	94	43.450	ENSMMOG00000002204	zc3hc1	99	42.576	Mola_mola
ENSPCAG00000001182	ZC3HC1	100	61.506	ENSMODG00000014630	ZC3HC1	91	62.134	Monodelphis_domestica
ENSPCAG00000001182	ZC3HC1	95	44.880	ENSMALG00000014447	zc3hc1	89	45.043	Monopterus_albus
ENSPCAG00000001182	ZC3HC1	100	80.435	MGP_CAROLIEiJ_G0028183	Zc3hc1	92	80.435	Mus_caroli
ENSPCAG00000001182	ZC3HC1	100	80.217	ENSMUSG00000039130	Zc3hc1	92	80.217	Mus_musculus
ENSPCAG00000001182	ZC3HC1	100	73.261	MGP_PahariEiJ_G0021941	Zc3hc1	91	73.261	Mus_pahari
ENSPCAG00000001182	ZC3HC1	100	80.217	MGP_SPRETEiJ_G0029183	Zc3hc1	92	80.217	Mus_spretus
ENSPCAG00000001182	ZC3HC1	95	85.092	ENSMPUG00000005297	ZC3HC1	86	85.092	Mustela_putorius_furo
ENSPCAG00000001182	ZC3HC1	73	77.259	ENSMLUG00000029228	-	99	77.259	Myotis_lucifugus
ENSPCAG00000001182	ZC3HC1	100	83.801	ENSMLUG00000000063	-	92	83.801	Myotis_lucifugus
ENSPCAG00000001182	ZC3HC1	100	82.646	ENSNGAG00000019014	Zc3hc1	92	82.646	Nannospalax_galili
ENSPCAG00000001182	ZC3HC1	94	44.966	ENSNBRG00000004577	zc3hc1	87	44.098	Neolamprologus_brichardi
ENSPCAG00000001182	ZC3HC1	99	85.403	ENSNLEG00000012698	ZC3HC1	97	85.124	Nomascus_leucogenys
ENSPCAG00000001182	ZC3HC1	100	76.522	ENSMEUG00000011023	ZC3HC1	92	76.522	Notamacropus_eugenii
ENSPCAG00000001182	ZC3HC1	62	80.093	ENSOPRG00000007867	-	58	80.093	Ochotona_princeps
ENSPCAG00000001182	ZC3HC1	100	80.217	ENSODEG00000014604	ZC3HC1	92	80.000	Octodon_degus
ENSPCAG00000001182	ZC3HC1	99	44.161	ENSONIG00000011644	zc3hc1	91	43.340	Oreochromis_niloticus
ENSPCAG00000001182	ZC3HC1	98	66.379	ENSOANG00000011460	ZC3HC1	100	66.379	Ornithorhynchus_anatinus
ENSPCAG00000001182	ZC3HC1	100	81.425	ENSOCUG00000017137	ZC3HC1	92	81.425	Oryctolagus_cuniculus
ENSPCAG00000001182	ZC3HC1	94	46.205	ENSORLG00000014409	zc3hc1	86	46.444	Oryzias_latipes
ENSPCAG00000001182	ZC3HC1	94	45.516	ENSORLG00020015874	zc3hc1	86	45.759	Oryzias_latipes_hni
ENSPCAG00000001182	ZC3HC1	94	45.291	ENSORLG00015014641	zc3hc1	86	45.536	Oryzias_latipes_hsok
ENSPCAG00000001182	ZC3HC1	93	46.774	ENSOMEG00000020604	zc3hc1	87	46.032	Oryzias_melastigma
ENSPCAG00000001182	ZC3HC1	93	46.313	ENSOMEG00000000215	zc3hc1	87	46.485	Oryzias_melastigma
ENSPCAG00000001182	ZC3HC1	100	78.478	ENSOGAG00000026193	ZC3HC1	92	78.478	Otolemur_garnettii
ENSPCAG00000001182	ZC3HC1	100	84.449	ENSOARG00000004907	ZC3HC1	90	84.449	Ovis_aries
ENSPCAG00000001182	ZC3HC1	99	86.492	ENSPPAG00000043172	ZC3HC1	98	87.805	Pan_paniscus
ENSPCAG00000001182	ZC3HC1	100	83.696	ENSPPRG00000001004	ZC3HC1	96	82.781	Panthera_pardus
ENSPCAG00000001182	ZC3HC1	100	84.348	ENSPTIG00000007823	ZC3HC1	96	83.444	Panthera_tigris_altaica
ENSPCAG00000001182	ZC3HC1	99	86.275	ENSPTRG00000019685	ZC3HC1	98	87.805	Pan_troglodytes
ENSPCAG00000001182	ZC3HC1	100	85.466	ENSPANG00000014229	ZC3HC1	98	87.379	Papio_anubis
ENSPCAG00000001182	ZC3HC1	93	48.276	ENSPKIG00000007172	zc3hc1	86	47.126	Paramormyrops_kingsleyae
ENSPCAG00000001182	ZC3HC1	100	60.256	ENSPSIG00000016646	ZC3HC1	92	60.897	Pelodiscus_sinensis
ENSPCAG00000001182	ZC3HC1	93	42.035	ENSPMGG00000003548	zc3hc1	90	39.675	Periophthalmus_magnuspinnatus
ENSPCAG00000001182	ZC3HC1	100	80.652	ENSPEMG00000000514	Zc3hc1	92	81.304	Peromyscus_maniculatus_bairdii
ENSPCAG00000001182	ZC3HC1	100	73.696	ENSPCIG00000020619	ZC3HC1	100	75.578	Phascolarctos_cinereus
ENSPCAG00000001182	ZC3HC1	99	43.067	ENSPFOG00000003466	zc3hc1	93	42.678	Poecilia_formosa
ENSPCAG00000001182	ZC3HC1	95	44.027	ENSPLAG00000022211	zc3hc1	88	43.612	Poecilia_latipinna
ENSPCAG00000001182	ZC3HC1	95	44.592	ENSPMEG00000001458	zc3hc1	90	43.548	Poecilia_mexicana
ENSPCAG00000001182	ZC3HC1	95	44.690	ENSPREG00000004004	zc3hc1	88	44.053	Poecilia_reticulata
ENSPCAG00000001182	ZC3HC1	99	77.440	ENSPPYG00000017998	ZC3HC1	91	77.440	Pongo_abelii
ENSPCAG00000001182	ZC3HC1	100	85.652	ENSPCOG00000017354	ZC3HC1	92	85.652	Propithecus_coquereli
ENSPCAG00000001182	ZC3HC1	100	78.261	ENSPVAG00000003195	ZC3HC1	92	78.261	Pteropus_vampyrus
ENSPCAG00000001182	ZC3HC1	94	44.643	ENSPNYG00000020692	zc3hc1	87	43.778	Pundamilia_nyererei
ENSPCAG00000001182	ZC3HC1	97	43.392	ENSPNAG00000020746	zc3hc1	91	43.392	Pygocentrus_nattereri
ENSPCAG00000001182	ZC3HC1	100	79.610	ENSRNOG00000010154	Zc3hc1	92	79.610	Rattus_norvegicus
ENSPCAG00000001182	ZC3HC1	98	86.755	ENSRBIG00000029409	ZC3HC1	100	86.755	Rhinopithecus_bieti
ENSPCAG00000001182	ZC3HC1	100	86.522	ENSRROG00000041831	ZC3HC1	98	86.893	Rhinopithecus_roxellana
ENSPCAG00000001182	ZC3HC1	97	73.318	ENSSBOG00000032787	ZC3HC1	98	87.379	Saimiri_boliviensis_boliviensis
ENSPCAG00000001182	ZC3HC1	98	76.484	ENSSHAG00000002529	ZC3HC1	99	76.139	Sarcophilus_harrisii
ENSPCAG00000001182	ZC3HC1	93	49.315	ENSSFOG00015003667	zc3hc1	82	48.519	Scleropages_formosus
ENSPCAG00000001182	ZC3HC1	94	45.796	ENSSMAG00000000647	zc3hc1	79	45.575	Scophthalmus_maximus
ENSPCAG00000001182	ZC3HC1	94	46.085	ENSSDUG00000004241	zc3hc1	85	45.434	Seriola_dumerili
ENSPCAG00000001182	ZC3HC1	94	46.085	ENSSLDG00000025056	zc3hc1	85	45.434	Seriola_lalandi_dorsalis
ENSPCAG00000001182	ZC3HC1	100	72.826	ENSSARG00000012013	ZC3HC1	92	72.826	Sorex_araneus
ENSPCAG00000001182	ZC3HC1	95	57.432	ENSSPUG00000000778	ZC3HC1	88	57.432	Sphenodon_punctatus
ENSPCAG00000001182	ZC3HC1	98	45.188	ENSSPAG00000020041	zc3hc1	93	44.583	Stegastes_partitus
ENSPCAG00000001182	ZC3HC1	100	85.000	ENSSSCG00000016565	ZC3HC1	100	84.576	Sus_scrofa
ENSPCAG00000001182	ZC3HC1	53	59.514	ENSTGUG00000016262	ZC3HC1	100	59.514	Taeniopygia_guttata
ENSPCAG00000001182	ZC3HC1	95	43.177	ENSTRUG00000020077	zc3hc1	88	42.729	Takifugu_rubripes
ENSPCAG00000001182	ZC3HC1	95	43.556	ENSTNIG00000007585	zc3hc1	92	43.177	Tetraodon_nigroviridis
ENSPCAG00000001182	ZC3HC1	99	73.420	ENSTBEG00000005216	ZC3HC1	91	73.420	Tupaia_belangeri
ENSPCAG00000001182	ZC3HC1	100	83.948	ENSTTRG00000008458	ZC3HC1	96	83.948	Tursiops_truncatus
ENSPCAG00000001182	ZC3HC1	100	85.435	ENSUAMG00000020249	ZC3HC1	92	85.435	Ursus_americanus
ENSPCAG00000001182	ZC3HC1	100	85.217	ENSUMAG00000009268	ZC3HC1	92	85.217	Ursus_maritimus
ENSPCAG00000001182	ZC3HC1	76	85.714	ENSVPAG00000010846	ZC3HC1	68	85.714	Vicugna_pacos
ENSPCAG00000001182	ZC3HC1	95	84.018	ENSVVUG00000012386	ZC3HC1	91	84.018	Vulpes_vulpes
ENSPCAG00000001182	ZC3HC1	89	52.857	ENSXETG00000033900	zc3hc1	84	52.983	Xenopus_tropicalis
ENSPCAG00000001182	ZC3HC1	95	43.805	ENSXCOG00000013570	zc3hc1	94	39.180	Xiphophorus_couchianus
ENSPCAG00000001182	ZC3HC1	95	44.469	ENSXMAG00000010979	zc3hc1	95	43.833	Xiphophorus_maculatus