EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000001228 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 27223 bases
Position: chrGeneScaffold_7483:24939-52161
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001131	MMR_HSR1	PF01926.23	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001202	-	519	-	ENSPCAP00000001131	173 (aa)	-	UPI00018AF6D2

Gene Model

Click here to download ENSPCAG00000001228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000001228	-	92	41.250	ENSPCAG00000016118	RAB11B	73	41.250
ENSPCAG00000001228	-	59	49.020	ENSPCAG00000000574	RAB30	50	49.020
ENSPCAG00000001228	-	94	34.568	ENSPCAG00000006752	RAB6A	87	34.568
ENSPCAG00000001228	-	59	43.137	ENSPCAG00000015578	RAB1B	51	43.137
ENSPCAG00000001228	-	92	33.750	ENSPCAG00000013887	RAB6B	77	33.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001228	-	96	57.229	ENSACAG00000009389	-	99	57.229	Anolis_carolinensis
ENSPCAG00000001228	-	99	71.930	ENSETEG00000005963	-	99	71.930	Echinops_telfairi
ENSPCAG00000001228	-	53	88.462	ENSEEUG00000001438	-	55	88.462	Erinaceus_europaeus
ENSPCAG00000001228	-	94	55.556	ENSGMOG00000006968	-	81	55.556	Gadus_morhua
ENSPCAG00000001228	-	97	58.683	ENSGACG00000013611	-	82	58.683	Gasterosteus_aculeatus
ENSPCAG00000001228	-	97	58.333	ENSLACG00000016518	-	53	58.333	Latimeria_chalumnae
ENSPCAG00000001228	-	61	89.286	ENSLAFG00000016780	-	77	89.286	Loxodonta_africana
ENSPCAG00000001228	-	95	72.121	ENSMLUG00000016268	-	100	72.121	Myotis_lucifugus
ENSPCAG00000001228	-	97	62.874	ENSMEUG00000015626	-	100	62.874	Notamacropus_eugenii
ENSPCAG00000001228	-	97	74.405	ENSOPRG00000007436	-	98	74.405	Ochotona_princeps
ENSPCAG00000001228	-	95	61.818	ENSPSIG00000008757	-	85	61.818	Pelodiscus_sinensis
ENSPCAG00000001228	-	95	63.636	ENSSHAG00000006833	-	99	63.636	Sarcophilus_harrisii
ENSPCAG00000001228	-	95	60.000	ENSTGUG00000013171	-	99	60.000	Taeniopygia_guttata
ENSPCAG00000001228	-	100	66.474	ENSTTRG00000002070	-	100	66.474	Tursiops_truncatus