EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001397 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 21494 bases
Position: chrscaffold_14361:15801-37294
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001286	CSD	PF00313.22	6.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001370	YBX3-201	861	-	ENSPCAP00000001286	287 (aa)	-	UPI00018ADF51

Gene Model

Click here to download ENSPCAG00000001397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001397	YBX3	95	100.000	ENSG00000060138	YBX3	91	96.429	Homo_sapiens
ENSPCAG00000001397	YBX3	93	83.026	ENSAMEG00000009393	YBX3	61	93.458	Ailuropoda_melanoleuca
ENSPCAG00000001397	YBX3	69	66.176	ENSAPLG00000003147	YBX3	72	66.507	Anas_platyrhynchos
ENSPCAG00000001397	YBX3	98	84.000	ENSANAG00000033366	-	65	84.000	Aotus_nancymaae
ENSPCAG00000001397	YBX3	98	88.070	ENSANAG00000024492	-	78	87.973	Aotus_nancymaae
ENSPCAG00000001397	YBX3	98	83.946	ENSBTAG00000009663	YBX3	68	85.000	Bos_taurus
ENSPCAG00000001397	YBX3	95	96.296	ENSCJAG00000021660	-	80	96.875	Callithrix_jacchus
ENSPCAG00000001397	YBX3	70	94.059	ENSCAFG00000013401	YBX3	66	94.686	Canis_familiaris
ENSPCAG00000001397	YBX3	98	86.411	ENSCAFG00020006412	YBX3	78	86.689	Canis_lupus_dingo
ENSPCAG00000001397	YBX3	98	84.281	ENSCHIG00000010863	YBX3	78	84.028	Capra_hircus
ENSPCAG00000001397	YBX3	70	94.554	ENSTSYG00000004204	-	63	94.686	Carlito_syrichta
ENSPCAG00000001397	YBX3	70	90.547	ENSCAPG00000015039	YBX3	67	90.821	Cavia_aperea
ENSPCAG00000001397	YBX3	72	91.787	ENSCPOG00000011329	YBX3	63	92.019	Cavia_porcellus
ENSPCAG00000001397	YBX3	98	89.199	ENSCCAG00000016469	YBX3	78	87.671	Cebus_capucinus
ENSPCAG00000001397	YBX3	98	89.236	ENSCATG00000034411	YBX3	79	88.055	Cercocebus_atys
ENSPCAG00000001397	YBX3	70	90.050	ENSCLAG00000016030	YBX3	68	90.338	Chinchilla_lanigera
ENSPCAG00000001397	YBX3	98	89.931	ENSCSAG00000008744	YBX3	79	88.396	Chlorocebus_sabaeus
ENSPCAG00000001397	YBX3	74	93.750	ENSCHOG00000011988	YBX3	58	93.750	Choloepus_hoffmanni
ENSPCAG00000001397	YBX3	71	82.524	ENSCPBG00000014147	YBX3	59	82.160	Chrysemys_picta_bellii
ENSPCAG00000001397	YBX3	73	94.286	ENSCANG00000036801	YBX3	67	96.875	Colobus_angolensis_palliatus
ENSPCAG00000001397	YBX3	100	87.847	ENSCGRG00001016148	Ybx3	78	85.764	Cricetulus_griseus_chok1gshd
ENSPCAG00000001397	YBX3	72	91.509	ENSCGRG00000004563	Ybx3	71	91.509	Cricetulus_griseus_crigri
ENSPCAG00000001397	YBX3	86	81.569	ENSDORG00000009103	Ybx3	58	94.203	Dipodomys_ordii
ENSPCAG00000001397	YBX3	71	95.098	ENSETEG00000002557	YBX3	72	95.098	Echinops_telfairi
ENSPCAG00000001397	YBX3	98	86.268	ENSEASG00005014726	YBX3	78	100.000	Equus_asinus_asinus
ENSPCAG00000001397	YBX3	98	89.753	ENSECAG00000013777	YBX3	78	89.965	Equus_caballus
ENSPCAG00000001397	YBX3	71	95.588	ENSEEUG00000010415	YBX3	72	95.588	Erinaceus_europaeus
ENSPCAG00000001397	YBX3	98	90.972	ENSFCAG00000027748	YBX3	78	90.785	Felis_catus
ENSPCAG00000001397	YBX3	69	65.672	ENSFALG00000003661	YBX3	71	65.534	Ficedula_albicollis
ENSPCAG00000001397	YBX3	70	87.562	ENSFDAG00000021192	YBX3	66	87.440	Fukomys_damarensis
ENSPCAG00000001397	YBX3	89	72.093	ENSGAGG00000017780	YBX3	59	81.690	Gopherus_agassizii
ENSPCAG00000001397	YBX3	95	100.000	ENSGGOG00000001352	YBX3	80	100.000	Gorilla_gorilla
ENSPCAG00000001397	YBX3	72	79.812	ENSHGLG00000014798	-	62	83.168	Heterocephalus_glaber_female
ENSPCAG00000001397	YBX3	63	87.978	ENSHGLG00000015495	-	57	87.978	Heterocephalus_glaber_female
ENSPCAG00000001397	YBX3	61	95.429	ENSSTOG00000002108	-	56	95.429	Ictidomys_tridecemlineatus
ENSPCAG00000001397	YBX3	90	80.385	ENSSTOG00000032577	-	59	86.854	Ictidomys_tridecemlineatus
ENSPCAG00000001397	YBX3	75	63.594	ENSJJAG00000014239	Ybx3	54	84.091	Jaculus_jaculus
ENSPCAG00000001397	YBX3	98	93.310	ENSLAFG00000017247	YBX3	79	93.448	Loxodonta_africana
ENSPCAG00000001397	YBX3	95	100.000	ENSMFAG00000039369	YBX3	80	100.000	Macaca_fascicularis
ENSPCAG00000001397	YBX3	83	92.083	ENSMMUG00000022469	YBX3	66	94.884	Macaca_mulatta
ENSPCAG00000001397	YBX3	95	100.000	ENSMNEG00000045109	YBX3	80	100.000	Macaca_nemestrina
ENSPCAG00000001397	YBX3	70	93.564	ENSMLEG00000033618	YBX3	59	93.720	Mandrillus_leucophaeus
ENSPCAG00000001397	YBX3	63	79.195	ENSMGAG00000014224	YBX3	64	77.181	Meleagris_gallopavo
ENSPCAG00000001397	YBX3	85	90.244	ENSMAUG00000012185	Ybx3	67	93.488	Mesocricetus_auratus
ENSPCAG00000001397	YBX3	98	88.772	ENSMICG00000038002	-	79	90.378	Microcebus_murinus
ENSPCAG00000001397	YBX3	85	68.852	ENSMICG00000031459	-	50	81.457	Microcebus_murinus
ENSPCAG00000001397	YBX3	77	93.722	ENSMOCG00000016291	Ybx3	70	93.953	Microtus_ochrogaster
ENSPCAG00000001397	YBX3	70	88.177	ENSMODG00000018248	YBX3	66	88.406	Monodelphis_domestica
ENSPCAG00000001397	YBX3	100	87.153	MGP_CAROLIEiJ_G0028947	Ybx3	78	85.069	Mus_caroli
ENSPCAG00000001397	YBX3	100	86.806	ENSMUSG00000030189	Ybx3	78	84.722	Mus_musculus
ENSPCAG00000001397	YBX3	100	87.500	MGP_PahariEiJ_G0022709	Ybx3	78	85.417	Mus_pahari
ENSPCAG00000001397	YBX3	100	87.153	MGP_SPRETEiJ_G0029994	Ybx3	78	85.069	Mus_spretus
ENSPCAG00000001397	YBX3	98	73.898	ENSMPUG00000011810	YBX3	79	72.667	Mustela_putorius_furo
ENSPCAG00000001397	YBX3	64	94.595	ENSMLUG00000007476	YBX3	69	94.595	Myotis_lucifugus
ENSPCAG00000001397	YBX3	80	84.120	ENSNGAG00000000710	Ybx3	58	54.378	Nannospalax_galili
ENSPCAG00000001397	YBX3	76	100.000	ENSNLEG00000034844	YBX3	52	100.000	Nomascus_leucogenys
ENSPCAG00000001397	YBX3	70	66.507	ENSMEUG00000002507	-	88	72.340	Notamacropus_eugenii
ENSPCAG00000001397	YBX3	81	85.043	ENSODEG00000017957	YBX3	63	86.047	Octodon_degus
ENSPCAG00000001397	YBX3	72	85.167	ENSOCUG00000001889	YBX3	62	85.581	Oryctolagus_cuniculus
ENSPCAG00000001397	YBX3	98	88.014	ENSOGAG00000013245	YBX3	79	88.255	Otolemur_garnettii
ENSPCAG00000001397	YBX3	73	81.043	ENSOARG00000020919	YBX3	73	81.279	Ovis_aries
ENSPCAG00000001397	YBX3	86	100.000	ENSPPAG00000039068	YBX3	57	100.000	Pan_paniscus
ENSPCAG00000001397	YBX3	98	90.972	ENSPPRG00000005859	YBX3	78	90.785	Panthera_pardus
ENSPCAG00000001397	YBX3	69	94.975	ENSPTIG00000005322	YBX3	59	94.686	Panthera_tigris_altaica
ENSPCAG00000001397	YBX3	95	100.000	ENSPTRG00000004681	YBX3	80	100.000	Pan_troglodytes
ENSPCAG00000001397	YBX3	98	89.547	ENSPANG00000010280	YBX3	78	88.356	Papio_anubis
ENSPCAG00000001397	YBX3	69	92.593	ENSPEMG00000010391	-	60	90.625	Peromyscus_maniculatus_bairdii
ENSPCAG00000001397	YBX3	82	91.139	ENSPEMG00000012132	-	67	93.953	Peromyscus_maniculatus_bairdii
ENSPCAG00000001397	YBX3	62	82.222	ENSPCIG00000029949	YBX3	69	82.222	Phascolarctos_cinereus
ENSPCAG00000001397	YBX3	98	90.559	ENSPPYG00000004279	YBX3	78	89.003	Pongo_abelii
ENSPCAG00000001397	YBX3	63	89.011	ENSPCOG00000011663	YBX3	100	85.490	Propithecus_coquereli
ENSPCAG00000001397	YBX3	82	93.671	ENSPVAG00000006740	YBX3	79	89.116	Pteropus_vampyrus
ENSPCAG00000001397	YBX3	100	87.847	ENSRNOG00000005480	Ybx3	78	85.764	Rattus_norvegicus
ENSPCAG00000001397	YBX3	86	100.000	ENSRBIG00000039208	YBX3	80	100.000	Rhinopithecus_bieti
ENSPCAG00000001397	YBX3	98	90.210	ENSRROG00000029638	YBX3	80	100.000	Rhinopithecus_roxellana
ENSPCAG00000001397	YBX3	88	79.921	ENSSBOG00000030573	YBX3	62	91.469	Saimiri_boliviensis_boliviensis
ENSPCAG00000001397	YBX3	69	83.495	ENSSHAG00000003262	YBX3	71	83.412	Sarcophilus_harrisii
ENSPCAG00000001397	YBX3	63	74.667	ENSSPUG00000009911	-	63	95.050	Sphenodon_punctatus
ENSPCAG00000001397	YBX3	98	84.122	ENSSSCG00000000633	YBX3	83	86.379	Sus_scrofa
ENSPCAG00000001397	YBX3	69	65.842	ENSTGUG00000012047	YBX3	72	65.217	Taeniopygia_guttata
ENSPCAG00000001397	YBX3	98	81.272	ENSTBEG00000012570	YBX3	59	93.427	Tupaia_belangeri
ENSPCAG00000001397	YBX3	62	83.516	ENSTTRG00000008045	YBX3	70	83.871	Tursiops_truncatus
ENSPCAG00000001397	YBX3	67	89.062	ENSUAMG00000016662	YBX3	71	89.394	Ursus_americanus
ENSPCAG00000001397	YBX3	69	93.970	ENSUMAG00000016118	YBX3	68	93.720	Ursus_maritimus
ENSPCAG00000001397	YBX3	69	63.819	ENSVPAG00000000876	YBX3	72	64.216	Vicugna_pacos
ENSPCAG00000001397	YBX3	67	90.576	ENSVVUG00000004956	YBX3	71	90.863	Vulpes_vulpes
ENSPCAG00000001397	YBX3	72	63.084	ENSXETG00000016239	ybx3	66	61.111	Xenopus_tropicalis