EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000001454 (Gene tree)
Gene ID: -
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 42285 bases
Position: chrGeneScaffold_6614:31454-73738
Accession: 8651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001369	KH_1	PF00013.29	1.4e-40	1	3
ENSPCAP00000001369	KH_1	PF00013.29	1.4e-40	2	3
ENSPCAP00000001369	KH_1	PF00013.29	1.4e-40	3	3
ENSPCAP00000001369	KH_2	PF07650.17	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001456	PCBP3-201	1041	-	ENSPCAP00000001369	347 (aa)	-	UPI00018AEDF2

Gene Model

Click here to download ENSPCAG00000001454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000001454	PCBP3	77	45.000	ENSPCAG00000009515	PCBP4	63	45.000
ENSPCAG00000001454	PCBP3	96	56.069	ENSPCAG00000005154	PCBP2	96	56.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001454	PCBP3	100	82.521	ENSG00000183570	PCBP3	97	82.521	Homo_sapiens
ENSPCAG00000001454	PCBP3	98	58.824	ENSAPOG00000023735	zgc:110045	93	58.824	Acanthochromis_polyacanthus
ENSPCAG00000001454	PCBP3	98	54.252	ENSACIG00000002577	zgc:110045	93	56.054	Amphilophus_citrinellus
ENSPCAG00000001454	PCBP3	52	61.202	ENSAOCG00000005266	zgc:110045	86	61.202	Amphiprion_ocellaris
ENSPCAG00000001454	PCBP3	98	58.529	ENSAPEG00000000729	zgc:110045	70	58.529	Amphiprion_percula
ENSPCAG00000001454	PCBP3	76	59.245	ENSATEG00000011191	zgc:110045	64	59.245	Anabas_testudineus
ENSPCAG00000001454	PCBP3	98	58.529	ENSACLG00000019285	zgc:110045	70	58.529	Astatotilapia_calliptera
ENSPCAG00000001454	PCBP3	100	82.235	ENSBTAG00000030775	PCBP3	97	82.235	Bos_taurus
ENSPCAG00000001454	PCBP3	100	76.000	ENSCAFG00000011907	PCBP3	88	76.000	Canis_familiaris
ENSPCAG00000001454	PCBP3	100	73.714	ENSCHIG00000015841	PCBP3	87	73.714	Capra_hircus
ENSPCAG00000001454	PCBP3	67	76.569	ENSTSYG00000005254	PCBP3	94	76.569	Carlito_syrichta
ENSPCAG00000001454	PCBP3	100	69.714	ENSCAPG00000006767	PCBP3	80	69.714	Cavia_aperea
ENSPCAG00000001454	PCBP3	100	76.000	ENSCPOG00000003648	PCBP3	88	76.000	Cavia_porcellus
ENSPCAG00000001454	PCBP3	100	81.089	ENSCCAG00000024561	PCBP3	99	81.089	Cebus_capucinus
ENSPCAG00000001454	PCBP3	100	77.077	ENSCATG00000038419	PCBP3	97	77.077	Cercocebus_atys
ENSPCAG00000001454	PCBP3	100	76.000	ENSCLAG00000006667	PCBP3	88	76.000	Chinchilla_lanigera
ENSPCAG00000001454	PCBP3	100	80.802	ENSCANG00000026757	PCBP3	97	80.802	Colobus_angolensis_palliatus
ENSPCAG00000001454	PCBP3	100	76.000	ENSCGRG00001006836	Pcbp3	88	76.000	Cricetulus_griseus_chok1gshd
ENSPCAG00000001454	PCBP3	100	76.000	ENSCGRG00000001837	Pcbp3	88	76.000	Cricetulus_griseus_crigri
ENSPCAG00000001454	PCBP3	98	58.529	ENSCSEG00000010020	zgc:110045	93	58.529	Cynoglossus_semilaevis
ENSPCAG00000001454	PCBP3	50	63.793	ENSCVAG00000004726	zgc:110045	78	63.793	Cyprinodon_variegatus
ENSPCAG00000001454	PCBP3	65	59.821	ENSDARG00000057141	zgc:110045	92	59.821	Danio_rerio
ENSPCAG00000001454	PCBP3	100	75.429	ENSDNOG00000049518	PCBP3	89	75.429	Dasypus_novemcinctus
ENSPCAG00000001454	PCBP3	70	75.203	ENSDORG00000003640	Pcbp3	99	75.203	Dipodomys_ordii
ENSPCAG00000001454	PCBP3	63	60.248	ENSEBUG00000009697	zgc:110045	99	51.584	Eptatretus_burgeri
ENSPCAG00000001454	PCBP3	100	70.940	ENSEASG00005007068	PCBP3	87	70.940	Equus_asinus_asinus
ENSPCAG00000001454	PCBP3	100	70.940	ENSECAG00000012413	PCBP3	87	70.940	Equus_caballus
ENSPCAG00000001454	PCBP3	98	56.647	ENSELUG00000019784	zgc:110045	91	56.647	Esox_lucius
ENSPCAG00000001454	PCBP3	100	76.000	ENSFCAG00000014812	PCBP3	88	76.000	Felis_catus
ENSPCAG00000001454	PCBP3	100	76.000	ENSFDAG00000009117	PCBP3	91	73.654	Fukomys_damarensis
ENSPCAG00000001454	PCBP3	98	53.198	ENSFHEG00000018838	-	96	53.198	Fundulus_heteroclitus
ENSPCAG00000001454	PCBP3	99	56.609	ENSGMOG00000005953	zgc:110045	94	56.609	Gadus_morhua
ENSPCAG00000001454	PCBP3	65	59.111	ENSGAFG00000017864	zgc:110045	91	59.111	Gambusia_affinis
ENSPCAG00000001454	PCBP3	60	76.786	ENSGAFG00000017860	-	77	76.786	Gambusia_affinis
ENSPCAG00000001454	PCBP3	98	58.892	ENSGACG00000003044	zgc:110045	94	58.892	Gasterosteus_aculeatus
ENSPCAG00000001454	PCBP3	100	76.000	ENSGGOG00000003683	PCBP3	88	76.000	Gorilla_gorilla
ENSPCAG00000001454	PCBP3	98	58.187	ENSHBUG00000012495	zgc:110045	93	58.187	Haplochromis_burtoni
ENSPCAG00000001454	PCBP3	100	75.714	ENSHGLG00000018620	PCBP3	91	73.143	Heterocephalus_glaber_female
ENSPCAG00000001454	PCBP3	100	75.714	ENSHGLG00100013590	PCBP3	91	73.143	Heterocephalus_glaber_male
ENSPCAG00000001454	PCBP3	74	78.571	ENSHCOG00000000818	zgc:110045	90	78.571	Hippocampus_comes
ENSPCAG00000001454	PCBP3	65	57.589	ENSIPUG00000003932	zgc:110045	76	57.589	Ictalurus_punctatus
ENSPCAG00000001454	PCBP3	100	76.000	ENSSTOG00000007178	PCBP3	88	76.000	Ictidomys_tridecemlineatus
ENSPCAG00000001454	PCBP3	100	76.000	ENSJJAG00000021192	Pcbp3	88	76.000	Jaculus_jaculus
ENSPCAG00000001454	PCBP3	76	53.992	ENSKMAG00000016179	-	84	67.442	Kryptolebias_marmoratus
ENSPCAG00000001454	PCBP3	95	64.286	ENSLBEG00000023074	zgc:110045	86	64.286	Labrus_bergylta
ENSPCAG00000001454	PCBP3	100	74.571	ENSLAFG00000020835	PCBP3	95	78.148	Loxodonta_africana
ENSPCAG00000001454	PCBP3	100	77.077	ENSMFAG00000034574	PCBP3	97	77.077	Macaca_fascicularis
ENSPCAG00000001454	PCBP3	100	76.000	ENSMMUG00000003825	PCBP3	77	93.333	Macaca_mulatta
ENSPCAG00000001454	PCBP3	100	77.077	ENSMNEG00000035551	PCBP3	97	77.077	Macaca_nemestrina
ENSPCAG00000001454	PCBP3	100	77.077	ENSMLEG00000038785	PCBP3	97	77.077	Mandrillus_leucophaeus
ENSPCAG00000001454	PCBP3	98	59.064	ENSMAMG00000014389	zgc:110045	96	59.064	Mastacembelus_armatus
ENSPCAG00000001454	PCBP3	98	58.529	ENSMZEG00005011785	zgc:110045	70	58.529	Maylandia_zebra
ENSPCAG00000001454	PCBP3	100	75.714	ENSMAUG00000007036	Pcbp3	88	75.714	Mesocricetus_auratus
ENSPCAG00000001454	PCBP3	100	76.000	ENSMICG00000012679	PCBP3	88	76.000	Microcebus_murinus
ENSPCAG00000001454	PCBP3	100	75.714	ENSMOCG00000016127	Pcbp3	88	75.714	Microtus_ochrogaster
ENSPCAG00000001454	PCBP3	50	63.006	ENSMMOG00000008399	zgc:110045	81	63.006	Mola_mola
ENSPCAG00000001454	PCBP3	52	60.656	ENSMALG00000008763	zgc:110045	88	60.656	Monopterus_albus
ENSPCAG00000001454	PCBP3	100	76.218	MGP_CAROLIEiJ_G0015475	Pcbp3	99	69.512	Mus_caroli
ENSPCAG00000001454	PCBP3	100	76.218	ENSMUSG00000001120	Pcbp3	99	69.512	Mus_musculus
ENSPCAG00000001454	PCBP3	100	82.286	MGP_PahariEiJ_G0030889	Pcbp3	89	82.286	Mus_pahari
ENSPCAG00000001454	PCBP3	100	82.286	MGP_SPRETEiJ_G0016288	Pcbp3	89	82.286	Mus_spretus
ENSPCAG00000001454	PCBP3	100	70.857	ENSMLUG00000003074	PCBP3	88	70.857	Myotis_lucifugus
ENSPCAG00000001454	PCBP3	100	75.714	ENSNGAG00000005416	Pcbp3	88	75.714	Nannospalax_galili
ENSPCAG00000001454	PCBP3	98	58.529	ENSNBRG00000017646	zgc:110045	70	58.529	Neolamprologus_brichardi
ENSPCAG00000001454	PCBP3	100	76.000	ENSNLEG00000002639	PCBP3	88	76.000	Nomascus_leucogenys
ENSPCAG00000001454	PCBP3	100	87.106	ENSMEUG00000012960	PCBP3	97	87.106	Notamacropus_eugenii
ENSPCAG00000001454	PCBP3	100	73.714	ENSODEG00000012873	PCBP3	88	73.714	Octodon_degus
ENSPCAG00000001454	PCBP3	98	58.824	ENSONIG00000010370	zgc:110045	74	58.824	Oreochromis_niloticus
ENSPCAG00000001454	PCBP3	79	83.696	ENSOANG00000006265	PCBP3	97	83.696	Ornithorhynchus_anatinus
ENSPCAG00000001454	PCBP3	98	58.824	ENSORLG00000014385	-	70	58.824	Oryzias_latipes
ENSPCAG00000001454	PCBP3	98	58.529	ENSORLG00020003139	zgc:110045	84	54.911	Oryzias_latipes_hni
ENSPCAG00000001454	PCBP3	98	59.412	ENSOMEG00000015459	-	70	59.412	Oryzias_melastigma
ENSPCAG00000001454	PCBP3	100	68.661	ENSOARG00000012704	PCBP3	88	68.661	Ovis_aries
ENSPCAG00000001454	PCBP3	100	76.000	ENSPPAG00000021940	PCBP3	88	76.000	Pan_paniscus
ENSPCAG00000001454	PCBP3	100	76.000	ENSPPRG00000003933	PCBP3	88	76.000	Panthera_pardus
ENSPCAG00000001454	PCBP3	100	61.190	ENSPTIG00000012038	PCBP3	87	62.000	Panthera_tigris_altaica
ENSPCAG00000001454	PCBP3	100	65.812	ENSPTRG00000014010	PCBP3	96	65.812	Pan_troglodytes
ENSPCAG00000001454	PCBP3	100	77.077	ENSPANG00000023631	PCBP3	97	77.077	Papio_anubis
ENSPCAG00000001454	PCBP3	77	57.463	ENSPMGG00000021588	-	54	57.463	Periophthalmus_magnuspinnatus
ENSPCAG00000001454	PCBP3	65	63.393	ENSPMGG00000022531	-	92	63.393	Periophthalmus_magnuspinnatus
ENSPCAG00000001454	PCBP3	100	76.000	ENSPEMG00000000587	Pcbp3	88	76.000	Peromyscus_maniculatus_bairdii
ENSPCAG00000001454	PCBP3	98	58.358	ENSPFOG00000002348	zgc:110045	94	58.358	Poecilia_formosa
ENSPCAG00000001454	PCBP3	65	55.556	ENSPLAG00000017488	zgc:110045	91	55.556	Poecilia_latipinna
ENSPCAG00000001454	PCBP3	98	56.305	ENSPMEG00000012762	zgc:110045	91	59.111	Poecilia_mexicana
ENSPCAG00000001454	PCBP3	98	58.065	ENSPREG00000001797	zgc:110045	90	59.910	Poecilia_reticulata
ENSPCAG00000001454	PCBP3	73	74.803	ENSPPYG00000011525	-	85	74.803	Pongo_abelii
ENSPCAG00000001454	PCBP3	100	77.937	ENSPCOG00000013797	PCBP3	99	77.937	Propithecus_coquereli
ENSPCAG00000001454	PCBP3	76	85.714	ENSPVAG00000000832	PCBP3	73	85.714	Pteropus_vampyrus
ENSPCAG00000001454	PCBP3	65	54.185	ENSPNYG00000004637	zgc:110045	94	54.185	Pundamilia_nyererei
ENSPCAG00000001454	PCBP3	65	59.821	ENSPNAG00000004501	zgc:110045	92	59.821	Pygocentrus_nattereri
ENSPCAG00000001454	PCBP3	100	77.871	ENSRROG00000034567	PCBP3	97	77.871	Rhinopithecus_roxellana
ENSPCAG00000001454	PCBP3	100	76.000	ENSSBOG00000005789	PCBP3	92	74.286	Saimiri_boliviensis_boliviensis
ENSPCAG00000001454	PCBP3	98	57.941	ENSSMAG00000013541	zgc:110045	86	58.824	Scophthalmus_maximus
ENSPCAG00000001454	PCBP3	76	62.738	ENSSDUG00000019371	zgc:110045	65	62.738	Seriola_dumerili
ENSPCAG00000001454	PCBP3	98	58.529	ENSSLDG00000021064	zgc:110045	70	58.529	Seriola_lalandi_dorsalis
ENSPCAG00000001454	PCBP3	98	58.824	ENSSPAG00000000563	zgc:110045	93	58.824	Stegastes_partitus
ENSPCAG00000001454	PCBP3	100	71.225	ENSSSCG00000023041	PCBP3	87	71.225	Sus_scrofa
ENSPCAG00000001454	PCBP3	53	66.854	ENSTRUG00000017789	zgc:110045	88	66.854	Takifugu_rubripes
ENSPCAG00000001454	PCBP3	52	76.786	ENSTRUG00000023273	-	60	76.786	Takifugu_rubripes
ENSPCAG00000001454	PCBP3	100	75.931	ENSUAMG00000006491	PCBP3	96	75.931	Ursus_americanus
ENSPCAG00000001454	PCBP3	100	64.023	ENSUMAG00000025403	PCBP3	88	64.023	Ursus_maritimus
ENSPCAG00000001454	PCBP3	100	75.358	ENSVVUG00000023862	PCBP3	96	75.358	Vulpes_vulpes
ENSPCAG00000001454	PCBP3	98	58.065	ENSXMAG00000008030	zgc:110045	70	58.065	Xiphophorus_maculatus