EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000001613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 7831 bases
Position: chrGeneScaffold_7676:1774-9604
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	1	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	2	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	3	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	4	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	5	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	6	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	7	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	8	9
ENSPCAP00000001485	zf-C2H2	PF00096.26	1.4e-49	9	9
ENSPCAP00000001485	zf-met	PF12874.7	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001578	-	1623	-	ENSPCAP00000001485	540 (aa)	-	UPI00018AE7E4

Gene Model

Click here to download ENSPCAG00000001613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000001613	-	60	38.393	ENSPCAG00000011671	PRDM5	77	38.393
ENSPCAG00000001613	-	75	43.860	ENSPCAG00000008589	ZNF628	80	43.860
ENSPCAG00000001613	-	99	49.533	ENSPCAG00000000878	ZNF582	88	49.533
ENSPCAG00000001613	-	67	39.493	ENSPCAG00000007544	GZF1	50	39.493
ENSPCAG00000001613	-	93	50.579	ENSPCAG00000015262	ZFP69B	100	50.579
ENSPCAG00000001613	-	99	45.912	ENSPCAG00000012543	ZNF234	99	40.048
ENSPCAG00000001613	-	100	43.388	ENSPCAG00000000195	ZKSCAN4	60	42.276
ENSPCAG00000001613	-	80	46.910	ENSPCAG00000005203	ZNF235	65	46.910
ENSPCAG00000001613	-	99	45.253	ENSPCAG00000009106	-	92	45.253
ENSPCAG00000001613	-	68	30.986	ENSPCAG00000016959	ZNF526	83	31.304
ENSPCAG00000001613	-	66	43.382	ENSPCAG00000015754	ZNF200	57	43.382
ENSPCAG00000001613	-	75	43.152	ENSPCAG00000004217	-	92	43.152
ENSPCAG00000001613	-	99	46.503	ENSPCAG00000007561	ZFP1	99	46.503
ENSPCAG00000001613	-	64	38.739	ENSPCAG00000008132	ZNF236	53	38.596
ENSPCAG00000001613	-	78	40.369	ENSPCAG00000000862	-	99	40.369
ENSPCAG00000001613	-	83	44.807	ENSPCAG00000007476	-	97	44.807
ENSPCAG00000001613	-	99	52.529	ENSPCAG00000016939	ZNF2	98	52.529
ENSPCAG00000001613	-	58	38.235	ENSPCAG00000001788	-	52	38.235
ENSPCAG00000001613	-	76	49.115	ENSPCAG00000016123	-	77	49.115
ENSPCAG00000001613	-	62	41.558	ENSPCAG00000011934	SNAI1	50	41.558
ENSPCAG00000001613	-	76	44.818	ENSPCAG00000005270	-	97	44.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001613	-	82	47.305	ENSACIG00000017647	-	91	47.305	Amphilophus_citrinellus
ENSPCAG00000001613	-	81	42.151	ENSAOCG00000003277	-	77	59.649	Amphiprion_ocellaris
ENSPCAG00000001613	-	75	37.830	ENSAPEG00000016601	-	83	37.830	Amphiprion_percula
ENSPCAG00000001613	-	75	38.776	ENSACLG00000015989	-	88	38.776	Astatotilapia_calliptera
ENSPCAG00000001613	-	75	46.766	ENSACLG00000005615	-	53	46.766	Astatotilapia_calliptera
ENSPCAG00000001613	-	71	45.603	ENSCSAVG00000002179	-	99	44.771	Ciona_savignyi
ENSPCAG00000001613	-	74	50.526	ENSCGRG00001004047	-	74	48.309	Cricetulus_griseus_chok1gshd
ENSPCAG00000001613	-	75	40.074	ENSCSEG00000001771	-	62	40.074	Cynoglossus_semilaevis
ENSPCAG00000001613	-	75	43.597	ENSEBUG00000011244	-	89	43.597	Eptatretus_burgeri
ENSPCAG00000001613	-	80	48.663	ENSEBUG00000002589	-	76	48.663	Eptatretus_burgeri
ENSPCAG00000001613	-	82	46.032	ENSEBUG00000002537	-	90	46.032	Eptatretus_burgeri
ENSPCAG00000001613	-	62	38.019	ENSHBUG00000016546	-	65	38.019	Haplochromis_burtoni
ENSPCAG00000001613	-	83	43.234	ENSHBUG00000012758	-	96	43.234	Haplochromis_burtoni
ENSPCAG00000001613	-	75	46.766	ENSHBUG00000020071	-	53	46.766	Haplochromis_burtoni
ENSPCAG00000001613	-	76	43.027	ENSMZEG00005020731	-	89	43.027	Maylandia_zebra
ENSPCAG00000001613	-	62	37.705	ENSMZEG00005027844	-	65	37.705	Maylandia_zebra
ENSPCAG00000001613	-	90	67.925	MGP_CAROLIEiJ_G0029612	Zfp141	58	67.925	Mus_caroli
ENSPCAG00000001613	-	84	66.038	ENSMUSG00000092416	Zfp141	62	66.038	Mus_musculus
ENSPCAG00000001613	-	100	52.852	MGP_SPRETEiJ_G0030709	-	100	52.852	Mus_spretus
ENSPCAG00000001613	-	82	50.538	ENSNBRG00000023229	-	90	47.340	Neolamprologus_brichardi
ENSPCAG00000001613	-	75	37.500	ENSONIG00000014100	-	91	37.500	Oreochromis_niloticus
ENSPCAG00000001613	-	83	41.587	ENSONIG00000018188	-	100	41.587	Oreochromis_niloticus
ENSPCAG00000001613	-	71	41.985	ENSONIG00000006238	-	99	36.120	Oreochromis_niloticus
ENSPCAG00000001613	-	75	36.137	ENSPFOG00000007708	-	99	36.137	Poecilia_formosa
ENSPCAG00000001613	-	75	43.333	ENSPLAG00000010448	-	57	43.333	Poecilia_latipinna
ENSPCAG00000001613	-	76	39.015	ENSPNYG00000005671	-	74	37.618	Pundamilia_nyererei
ENSPCAG00000001613	-	75	53.604	ENSPNAG00000015131	-	92	53.604	Pygocentrus_nattereri
ENSPCAG00000001613	-	75	48.936	ENSSFOG00015000652	ZNF775	92	47.929	Scleropages_formosus
ENSPCAG00000001613	-	75	42.731	ENSSDUG00000020595	-	85	41.036	Seriola_dumerili
ENSPCAG00000001613	-	83	44.718	ENSSDUG00000005401	-	95	43.750	Seriola_dumerili
ENSPCAG00000001613	-	75	42.373	ENSSDUG00000004089	-	97	37.838	Seriola_dumerili
ENSPCAG00000001613	-	75	48.120	ENSSPUG00000007064	-	99	48.120	Sphenodon_punctatus
ENSPCAG00000001613	-	80	46.026	ENSSPUG00000007092	-	50	46.026	Sphenodon_punctatus
ENSPCAG00000001613	-	75	42.017	ENSSPAG00000009587	-	99	42.017	Stegastes_partitus
ENSPCAG00000001613	-	99	47.893	ENSTTRG00000004891	-	100	47.059	Tursiops_truncatus
ENSPCAG00000001613	-	83	33.485	ENSXETG00000015125	-	98	35.036	Xenopus_tropicalis
ENSPCAG00000001613	-	75	53.419	ENSXETG00000030967	-	94	53.419	Xenopus_tropicalis