EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001621 (Gene tree)
Gene ID: -
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 14338 bases
Position: chrGeneScaffold_4150:38160-52497
Accession: 24101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001579	ARS2	PF04959.13	2.9e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001678	SRRT-201	2643	-	ENSPCAP00000001579	880 (aa)	-	UPI00018AE97B

Gene Model

Click here to download ENSPCAG00000001621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001621	SRRT	100	94.118	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSPCAG00000001621	SRRT	53	73.996	ENSAPOG00000002304	srrt	54	71.102	Acanthochromis_polyacanthus
ENSPCAG00000001621	SRRT	79	73.784	ENSACIG00000015795	srrt	87	73.784	Amphilophus_citrinellus
ENSPCAG00000001621	SRRT	79	74.207	ENSAOCG00000009693	srrt	87	74.207	Amphiprion_ocellaris
ENSPCAG00000001621	SRRT	93	52.159	ENSAOCG00000009189	-	96	55.696	Amphiprion_ocellaris
ENSPCAG00000001621	SRRT	93	52.159	ENSAPEG00000020016	-	96	55.696	Amphiprion_percula
ENSPCAG00000001621	SRRT	79	73.784	ENSAPEG00000003646	srrt	88	73.784	Amphiprion_percula
ENSPCAG00000001621	SRRT	56	60.279	ENSATEG00000003652	-	85	61.983	Anabas_testudineus
ENSPCAG00000001621	SRRT	81	71.670	ENSATEG00000014425	srrt	96	63.499	Anabas_testudineus
ENSPCAG00000001621	SRRT	95	70.890	ENSACAG00000001014	SRRT	96	73.746	Anolis_carolinensis
ENSPCAG00000001621	SRRT	100	93.778	ENSANAG00000031718	SRRT	100	93.778	Aotus_nancymaae
ENSPCAG00000001621	SRRT	53	72.516	ENSACLG00000013156	srrt	50	72.516	Astatotilapia_calliptera
ENSPCAG00000001621	SRRT	100	93.213	ENSBTAG00000001134	SRRT	100	93.213	Bos_taurus
ENSPCAG00000001621	SRRT	59	47.500	WBGene00017085	E01A2.2	80	47.500	Caenorhabditis_elegans
ENSPCAG00000001621	SRRT	100	93.326	ENSCJAG00000014917	SRRT	100	93.326	Callithrix_jacchus
ENSPCAG00000001621	SRRT	100	94.005	ENSCAFG00000023538	SRRT	100	94.005	Canis_familiaris
ENSPCAG00000001621	SRRT	100	93.439	ENSCAFG00020013358	SRRT	100	93.439	Canis_lupus_dingo
ENSPCAG00000001621	SRRT	98	92.940	ENSCHIG00000010495	SRRT	98	92.940	Capra_hircus
ENSPCAG00000001621	SRRT	96	88.797	ENSTSYG00000036426	SRRT	99	89.929	Carlito_syrichta
ENSPCAG00000001621	SRRT	95	90.391	ENSCAPG00000013586	SRRT	100	90.510	Cavia_aperea
ENSPCAG00000001621	SRRT	100	93.446	ENSCPOG00000001739	SRRT	100	93.446	Cavia_porcellus
ENSPCAG00000001621	SRRT	100	93.552	ENSCCAG00000015877	SRRT	100	93.552	Cebus_capucinus
ENSPCAG00000001621	SRRT	100	93.439	ENSCATG00000036306	SRRT	100	93.439	Cercocebus_atys
ENSPCAG00000001621	SRRT	100	93.665	ENSCLAG00000007568	SRRT	100	93.665	Chinchilla_lanigera
ENSPCAG00000001621	SRRT	100	93.778	ENSCSAG00000017996	SRRT	100	93.778	Chlorocebus_sabaeus
ENSPCAG00000001621	SRRT	57	93.789	ENSCHOG00000007815	SRRT	69	93.789	Choloepus_hoffmanni
ENSPCAG00000001621	SRRT	73	84.274	ENSCPBG00000011553	SRRT	82	84.190	Chrysemys_picta_bellii
ENSPCAG00000001621	SRRT	100	41.593	ENSCING00000003506	-	71	50.307	Ciona_intestinalis
ENSPCAG00000001621	SRRT	100	39.552	ENSCSAVG00000008394	-	83	53.541	Ciona_savignyi
ENSPCAG00000001621	SRRT	100	93.100	ENSCANG00000034556	SRRT	100	93.100	Colobus_angolensis_palliatus
ENSPCAG00000001621	SRRT	98	92.032	ENSCGRG00001001594	Srrt	98	91.109	Cricetulus_griseus_chok1gshd
ENSPCAG00000001621	SRRT	98	84.332	ENSCGRG00000007292	Srrt	90	92.034	Cricetulus_griseus_crigri
ENSPCAG00000001621	SRRT	53	65.539	ENSCSEG00000017878	srrt	50	66.385	Cynoglossus_semilaevis
ENSPCAG00000001621	SRRT	95	63.115	ENSCVAG00000019848	srrt	54	72.727	Cyprinodon_variegatus
ENSPCAG00000001621	SRRT	51	60.044	ENSCVAG00000017344	-	51	60.222	Cyprinodon_variegatus
ENSPCAG00000001621	SRRT	100	94.005	ENSDNOG00000003851	SRRT	100	94.005	Dasypus_novemcinctus
ENSPCAG00000001621	SRRT	98	90.427	ENSDORG00000005584	Srrt	98	90.773	Dipodomys_ordii
ENSPCAG00000001621	SRRT	84	49.383	FBgn0033062	Ars2	64	54.739	Drosophila_melanogaster
ENSPCAG00000001621	SRRT	87	91.869	ENSETEG00000016175	SRRT	82	92.857	Echinops_telfairi
ENSPCAG00000001621	SRRT	63	61.250	ENSEBUG00000008517	-	77	61.250	Eptatretus_burgeri
ENSPCAG00000001621	SRRT	100	94.118	ENSEASG00005016956	SRRT	100	94.118	Equus_asinus_asinus
ENSPCAG00000001621	SRRT	100	94.231	ENSECAG00000012292	SRRT	100	94.231	Equus_caballus
ENSPCAG00000001621	SRRT	85	97.727	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSPCAG00000001621	SRRT	53	61.350	ENSELUG00000021216	-	53	62.168	Esox_lucius
ENSPCAG00000001621	SRRT	100	94.231	ENSFCAG00000006855	SRRT	100	94.231	Felis_catus
ENSPCAG00000001621	SRRT	100	88.914	ENSFDAG00000021347	SRRT	98	88.657	Fukomys_damarensis
ENSPCAG00000001621	SRRT	55	53.427	ENSFHEG00000004105	-	93	55.301	Fundulus_heteroclitus
ENSPCAG00000001621	SRRT	74	74.561	ENSFHEG00000002756	srrt	89	72.877	Fundulus_heteroclitus
ENSPCAG00000001621	SRRT	95	60.205	ENSGMOG00000018619	srrt	51	68.076	Gadus_morhua
ENSPCAG00000001621	SRRT	93	51.332	ENSGAFG00000020383	-	54	58.542	Gambusia_affinis
ENSPCAG00000001621	SRRT	53	72.727	ENSGAFG00000005423	srrt	51	72.727	Gambusia_affinis
ENSPCAG00000001621	SRRT	95	62.128	ENSGACG00000020387	srrt	51	72.479	Gasterosteus_aculeatus
ENSPCAG00000001621	SRRT	93	50.469	ENSGACG00000001100	-	53	59.298	Gasterosteus_aculeatus
ENSPCAG00000001621	SRRT	100	94.118	ENSGGOG00000001508	SRRT	99	94.118	Gorilla_gorilla
ENSPCAG00000001621	SRRT	53	72.727	ENSHBUG00000002942	srrt	50	72.727	Haplochromis_burtoni
ENSPCAG00000001621	SRRT	100	92.377	ENSHGLG00000008344	Srrt	98	90.878	Heterocephalus_glaber_female
ENSPCAG00000001621	SRRT	100	92.760	ENSHGLG00100018857	Srrt	100	92.760	Heterocephalus_glaber_male
ENSPCAG00000001621	SRRT	93	50.000	ENSHCOG00000008904	-	56	58.542	Hippocampus_comes
ENSPCAG00000001621	SRRT	98	61.921	ENSHCOG00000005403	srrt	52	69.767	Hippocampus_comes
ENSPCAG00000001621	SRRT	100	93.213	ENSSTOG00000013776	SRRT	100	93.213	Ictidomys_tridecemlineatus
ENSPCAG00000001621	SRRT	98	90.046	ENSJJAG00000010446	Srrt	98	90.162	Jaculus_jaculus
ENSPCAG00000001621	SRRT	95	62.471	ENSKMAG00000013599	srrt	54	72.304	Kryptolebias_marmoratus
ENSPCAG00000001621	SRRT	53	72.304	ENSLBEG00000016308	srrt	54	74.051	Labrus_bergylta
ENSPCAG00000001621	SRRT	95	62.146	ENSLACG00000001089	SRRT	96	61.565	Latimeria_chalumnae
ENSPCAG00000001621	SRRT	61	79.518	ENSLOCG00000013658	srrt	52	66.596	Lepisosteus_oculatus
ENSPCAG00000001621	SRRT	100	94.457	ENSLAFG00000007725	SRRT	100	94.457	Loxodonta_africana
ENSPCAG00000001621	SRRT	100	93.213	ENSMFAG00000033745	SRRT	100	93.213	Macaca_fascicularis
ENSPCAG00000001621	SRRT	100	93.778	ENSMMUG00000021255	SRRT	100	93.778	Macaca_mulatta
ENSPCAG00000001621	SRRT	100	93.778	ENSMNEG00000041864	SRRT	100	93.778	Macaca_nemestrina
ENSPCAG00000001621	SRRT	100	93.213	ENSMLEG00000029479	SRRT	100	93.213	Mandrillus_leucophaeus
ENSPCAG00000001621	SRRT	93	51.486	ENSMAMG00000010681	-	96	55.709	Mastacembelus_armatus
ENSPCAG00000001621	SRRT	53	71.459	ENSMAMG00000014311	srrt	51	72.516	Mastacembelus_armatus
ENSPCAG00000001621	SRRT	53	72.516	ENSMZEG00005016135	srrt	50	72.516	Maylandia_zebra
ENSPCAG00000001621	SRRT	98	92.361	ENSMAUG00000011386	Srrt	98	91.782	Mesocricetus_auratus
ENSPCAG00000001621	SRRT	100	94.005	ENSMICG00000009471	SRRT	100	94.005	Microcebus_murinus
ENSPCAG00000001621	SRRT	98	91.667	ENSMOCG00000001971	Srrt	98	91.667	Microtus_ochrogaster
ENSPCAG00000001621	SRRT	95	63.318	ENSMMOG00000016399	srrt	54	72.304	Mola_mola
ENSPCAG00000001621	SRRT	54	84.742	ENSMODG00000004862	SRRT	90	87.885	Monodelphis_domestica
ENSPCAG00000001621	SRRT	59	48.560	ENSMALG00000005567	-	84	51.483	Monopterus_albus
ENSPCAG00000001621	SRRT	98	92.014	MGP_CAROLIEiJ_G0027870	Srrt	100	95.668	Mus_caroli
ENSPCAG00000001621	SRRT	98	92.014	ENSMUSG00000037364	Srrt	99	95.668	Mus_musculus
ENSPCAG00000001621	SRRT	98	92.014	MGP_PahariEiJ_G0024456	Srrt	100	95.307	Mus_pahari
ENSPCAG00000001621	SRRT	98	92.014	MGP_SPRETEiJ_G0028875	Srrt	100	95.668	Mus_spretus
ENSPCAG00000001621	SRRT	100	94.231	ENSMPUG00000015839	SRRT	100	94.231	Mustela_putorius_furo
ENSPCAG00000001621	SRRT	100	94.005	ENSMLUG00000009975	SRRT	100	94.005	Myotis_lucifugus
ENSPCAG00000001621	SRRT	98	92.245	ENSNGAG00000023715	Srrt	100	91.033	Nannospalax_galili
ENSPCAG00000001621	SRRT	53	71.247	ENSNBRG00000019100	srrt	52	71.247	Neolamprologus_brichardi
ENSPCAG00000001621	SRRT	95	82.718	ENSNLEG00000011987	SRRT	99	80.361	Nomascus_leucogenys
ENSPCAG00000001621	SRRT	98	71.609	ENSMEUG00000011941	SRRT	98	71.494	Notamacropus_eugenii
ENSPCAG00000001621	SRRT	63	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSPCAG00000001621	SRRT	100	92.195	ENSODEG00000016856	SRRT	100	92.195	Octodon_degus
ENSPCAG00000001621	SRRT	53	72.939	ENSONIG00000004242	srrt	52	72.727	Oreochromis_niloticus
ENSPCAG00000001621	SRRT	96	62.942	ENSORLG00000008120	srrt	52	71.882	Oryzias_latipes
ENSPCAG00000001621	SRRT	96	62.014	ENSORLG00020003058	srrt	52	71.670	Oryzias_latipes_hni
ENSPCAG00000001621	SRRT	96	62.144	ENSORLG00015008062	srrt	52	71.670	Oryzias_latipes_hsok
ENSPCAG00000001621	SRRT	96	64.376	ENSOMEG00000003155	srrt	87	72.093	Oryzias_melastigma
ENSPCAG00000001621	SRRT	93	55.193	ENSOMEG00000006963	-	53	62.422	Oryzias_melastigma
ENSPCAG00000001621	SRRT	100	94.118	ENSOGAG00000017242	SRRT	100	94.118	Otolemur_garnettii
ENSPCAG00000001621	SRRT	98	92.361	ENSOARG00000015645	SRRT	98	92.361	Ovis_aries
ENSPCAG00000001621	SRRT	100	93.439	ENSPPAG00000041090	SRRT	100	93.439	Pan_paniscus
ENSPCAG00000001621	SRRT	100	93.326	ENSPPRG00000009557	SRRT	100	93.326	Panthera_pardus
ENSPCAG00000001621	SRRT	100	94.118	ENSPTIG00000014355	SRRT	100	94.118	Panthera_tigris_altaica
ENSPCAG00000001621	SRRT	100	93.439	ENSPTRG00000019511	SRRT	100	93.439	Pan_troglodytes
ENSPCAG00000001621	SRRT	97	91.244	ENSPANG00000020763	SRRT	98	91.244	Papio_anubis
ENSPCAG00000001621	SRRT	96	66.356	ENSPKIG00000005434	srrt	55	73.441	Paramormyrops_kingsleyae
ENSPCAG00000001621	SRRT	94	65.714	ENSPKIG00000022212	-	96	65.304	Paramormyrops_kingsleyae
ENSPCAG00000001621	SRRT	95	77.294	ENSPSIG00000016311	SRRT	96	77.518	Pelodiscus_sinensis
ENSPCAG00000001621	SRRT	98	90.509	ENSPEMG00000010834	Srrt	98	90.509	Peromyscus_maniculatus_bairdii
ENSPCAG00000001621	SRRT	98	86.897	ENSPCIG00000000816	SRRT	98	88.966	Phascolarctos_cinereus
ENSPCAG00000001621	SRRT	53	72.785	ENSPFOG00000005704	srrt	51	72.785	Poecilia_formosa
ENSPCAG00000001621	SRRT	93	50.422	ENSPFOG00000016554	-	54	58.333	Poecilia_formosa
ENSPCAG00000001621	SRRT	93	50.481	ENSPLAG00000004526	-	55	58.212	Poecilia_latipinna
ENSPCAG00000001621	SRRT	53	72.304	ENSPLAG00000021992	srrt	51	72.304	Poecilia_latipinna
ENSPCAG00000001621	SRRT	90	49.627	ENSPMEG00000001520	-	53	57.582	Poecilia_mexicana
ENSPCAG00000001621	SRRT	79	72.363	ENSPMEG00000001182	srrt	85	72.363	Poecilia_mexicana
ENSPCAG00000001621	SRRT	95	63.048	ENSPREG00000022308	srrt	51	72.785	Poecilia_reticulata
ENSPCAG00000001621	SRRT	98	84.125	ENSPPYG00000017432	SRRT	98	83.893	Pongo_abelii
ENSPCAG00000001621	SRRT	100	94.231	ENSPCOG00000025751	SRRT	100	94.231	Propithecus_coquereli
ENSPCAG00000001621	SRRT	78	86.608	ENSPVAG00000000834	SRRT	100	86.608	Pteropus_vampyrus
ENSPCAG00000001621	SRRT	53	72.516	ENSPNYG00000018710	srrt	52	72.516	Pundamilia_nyererei
ENSPCAG00000001621	SRRT	74	77.987	ENSPNAG00000010629	srrt	76	62.340	Pygocentrus_nattereri
ENSPCAG00000001621	SRRT	54	84.454	ENSRNOG00000048277	AABR07035787.1	93	84.454	Rattus_norvegicus
ENSPCAG00000001621	SRRT	100	93.778	ENSRBIG00000035718	SRRT	100	93.778	Rhinopithecus_bieti
ENSPCAG00000001621	SRRT	100	93.778	ENSRROG00000030622	SRRT	100	93.778	Rhinopithecus_roxellana
ENSPCAG00000001621	SRRT	100	93.552	ENSSBOG00000033570	SRRT	100	93.552	Saimiri_boliviensis_boliviensis
ENSPCAG00000001621	SRRT	72	81.832	ENSSHAG00000007349	-	100	84.317	Sarcophilus_harrisii
ENSPCAG00000001621	SRRT	94	67.404	ENSSFOG00015017293	srrt	96	67.614	Scleropages_formosus
ENSPCAG00000001621	SRRT	95	62.750	ENSSMAG00000015342	srrt	54	73.150	Scophthalmus_maximus
ENSPCAG00000001621	SRRT	53	72.727	ENSSDUG00000012049	srrt	53	73.573	Seriola_dumerili
ENSPCAG00000001621	SRRT	55	50.696	ENSSDUG00000002051	-	93	52.439	Seriola_dumerili
ENSPCAG00000001621	SRRT	81	72.304	ENSSLDG00000017477	srrt	84	73.150	Seriola_lalandi_dorsalis
ENSPCAG00000001621	SRRT	53	53.249	ENSSPAG00000018943	-	95	54.738	Stegastes_partitus
ENSPCAG00000001621	SRRT	53	72.899	ENSSPAG00000005665	srrt	51	72.899	Stegastes_partitus
ENSPCAG00000001621	SRRT	95	90.107	ENSSSCG00000024789	SRRT	99	90.000	Sus_scrofa
ENSPCAG00000001621	SRRT	90	51.806	ENSTRUG00000000023	-	51	58.022	Takifugu_rubripes
ENSPCAG00000001621	SRRT	53	71.368	ENSTRUG00000016075	srrt	96	62.946	Takifugu_rubripes
ENSPCAG00000001621	SRRT	74	60.570	ENSTNIG00000011779	srrt	100	60.266	Tetraodon_nigroviridis
ENSPCAG00000001621	SRRT	56	55.754	ENSTNIG00000003111	-	53	59.375	Tetraodon_nigroviridis
ENSPCAG00000001621	SRRT	63	94.615	ENSTBEG00000005212	SRRT	62	94.615	Tupaia_belangeri
ENSPCAG00000001621	SRRT	100	93.552	ENSTTRG00000011104	SRRT	100	93.552	Tursiops_truncatus
ENSPCAG00000001621	SRRT	95	94.076	ENSUAMG00000027997	SRRT	98	94.076	Ursus_americanus
ENSPCAG00000001621	SRRT	100	94.344	ENSUMAG00000011295	SRRT	100	94.344	Ursus_maritimus
ENSPCAG00000001621	SRRT	100	94.005	ENSVVUG00000023572	SRRT	100	94.005	Vulpes_vulpes
ENSPCAG00000001621	SRRT	72	81.366	ENSXETG00000025124	srrt	72	81.366	Xenopus_tropicalis
ENSPCAG00000001621	SRRT	58	47.002	ENSXCOG00000013105	-	90	49.684	Xiphophorus_couchianus
ENSPCAG00000001621	SRRT	80	73.820	ENSXMAG00000007627	srrt	86	73.150	Xiphophorus_maculatus
ENSPCAG00000001621	SRRT	93	50.242	ENSXMAG00000002090	-	54	58.577	Xiphophorus_maculatus