EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001648 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 13225 bases
Position: chrGeneScaffold_6010:45432-58656
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001563	MBD	PF01429.19	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001660	MBD1-201	1815	-	ENSPCAP00000001563	604 (aa)	-	UPI00018AEF7F

Gene Model

Click here to download ENSPCAG00000001648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001648	MBD1	93	86.260	ENSG00000141644	MBD1	99	90.076	Homo_sapiens
ENSPCAG00000001648	MBD1	93	87.879	ENSAMEG00000000238	MBD1	96	71.632	Ailuropoda_melanoleuca
ENSPCAG00000001648	MBD1	68	34.010	ENSATEG00000009608	mbd1b	51	34.010	Anabas_testudineus
ENSPCAG00000001648	MBD1	63	41.832	ENSACAG00000006091	-	100	41.832	Anolis_carolinensis
ENSPCAG00000001648	MBD1	93	87.405	ENSANAG00000036253	MBD1	97	74.590	Aotus_nancymaae
ENSPCAG00000001648	MBD1	93	87.500	ENSBTAG00000003801	MBD1	90	87.500	Bos_taurus
ENSPCAG00000001648	MBD1	93	83.942	ENSCJAG00000004959	MBD1	99	70.405	Callithrix_jacchus
ENSPCAG00000001648	MBD1	93	87.500	ENSCAFG00000018928	MBD1	96	72.222	Canis_familiaris
ENSPCAG00000001648	MBD1	92	87.500	ENSCAFG00020024272	MBD1	97	71.589	Canis_lupus_dingo
ENSPCAG00000001648	MBD1	93	87.500	ENSCHIG00000021134	MBD1	99	76.238	Capra_hircus
ENSPCAG00000001648	MBD1	93	84.733	ENSTSYG00000000509	MBD1	85	84.848	Carlito_syrichta
ENSPCAG00000001648	MBD1	99	55.184	ENSCAPG00000015782	MBD1	96	55.184	Cavia_aperea
ENSPCAG00000001648	MBD1	86	75.828	ENSCPOG00000001671	MBD1	86	75.828	Cavia_porcellus
ENSPCAG00000001648	MBD1	99	74.878	ENSCCAG00000034600	MBD1	85	86.742	Cebus_capucinus
ENSPCAG00000001648	MBD1	93	86.260	ENSCATG00000029959	MBD1	99	76.694	Cercocebus_atys
ENSPCAG00000001648	MBD1	99	70.952	ENSCLAG00000007457	MBD1	88	70.952	Chinchilla_lanigera
ENSPCAG00000001648	MBD1	99	76.529	ENSCSAG00000018070	MBD1	99	76.529	Chlorocebus_sabaeus
ENSPCAG00000001648	MBD1	93	85.878	ENSCANG00000033425	MBD1	99	76.198	Colobus_angolensis_palliatus
ENSPCAG00000001648	MBD1	99	67.107	ENSCGRG00001014843	Mbd1	99	67.107	Cricetulus_griseus_chok1gshd
ENSPCAG00000001648	MBD1	73	74.138	ENSCGRG00000014135	Mbd1	82	74.138	Cricetulus_griseus_crigri
ENSPCAG00000001648	MBD1	93	86.742	ENSDNOG00000015998	MBD1	99	71.224	Dasypus_novemcinctus
ENSPCAG00000001648	MBD1	89	69.207	ENSDORG00000013917	Mbd1	96	69.207	Dipodomys_ordii
ENSPCAG00000001648	MBD1	93	87.500	ENSEASG00005003857	MBD1	99	78.182	Equus_asinus_asinus
ENSPCAG00000001648	MBD1	93	87.500	ENSECAG00000011497	MBD1	80	77.888	Equus_caballus
ENSPCAG00000001648	MBD1	93	88.258	ENSFCAG00000015730	MBD1	85	88.258	Felis_catus
ENSPCAG00000001648	MBD1	98	60.601	ENSFDAG00000011085	MBD1	95	67.606	Fukomys_damarensis
ENSPCAG00000001648	MBD1	67	33.673	ENSFHEG00000020120	mbd1b	50	34.184	Fundulus_heteroclitus
ENSPCAG00000001648	MBD1	93	86.260	ENSGGOG00000016966	MBD1	99	76.529	Gorilla_gorilla
ENSPCAG00000001648	MBD1	99	73.884	ENSHGLG00000008740	MBD1	99	73.884	Heterocephalus_glaber_female
ENSPCAG00000001648	MBD1	89	82.576	ENSHGLG00100005198	MBD1	99	82.576	Heterocephalus_glaber_male
ENSPCAG00000001648	MBD1	99	71.220	ENSSTOG00000007780	MBD1	99	71.220	Ictidomys_tridecemlineatus
ENSPCAG00000001648	MBD1	98	59.129	ENSJJAG00000022859	Mbd1	96	60.302	Jaculus_jaculus
ENSPCAG00000001648	MBD1	64	38.875	ENSLACG00000002414	-	57	38.875	Latimeria_chalumnae
ENSPCAG00000001648	MBD1	99	75.246	ENSLAFG00000031328	MBD1	97	75.246	Loxodonta_africana
ENSPCAG00000001648	MBD1	93	85.878	ENSMFAG00000026335	MBD1	99	76.529	Macaca_fascicularis
ENSPCAG00000001648	MBD1	93	85.878	ENSMMUG00000009050	MBD1	99	72.857	Macaca_mulatta
ENSPCAG00000001648	MBD1	93	85.878	ENSMNEG00000038822	MBD1	99	76.529	Macaca_nemestrina
ENSPCAG00000001648	MBD1	93	86.260	ENSMLEG00000043121	MBD1	99	76.694	Mandrillus_leucophaeus
ENSPCAG00000001648	MBD1	67	34.343	ENSMAMG00000023341	-	60	37.059	Mastacembelus_armatus
ENSPCAG00000001648	MBD1	99	75.081	ENSMICG00000006414	MBD1	99	75.244	Microcebus_murinus
ENSPCAG00000001648	MBD1	51	73.770	ENSMODG00000001286	-	50	73.770	Monodelphis_domestica
ENSPCAG00000001648	MBD1	98	59.904	ENSMUSG00000024561	Mbd1	96	59.904	Mus_musculus
ENSPCAG00000001648	MBD1	99	60.350	MGP_PahariEiJ_G0019128	Mbd1	99	60.828	Mus_pahari
ENSPCAG00000001648	MBD1	98	60.841	MGP_SPRETEiJ_G0023304	Mbd1	99	60.841	Mus_spretus
ENSPCAG00000001648	MBD1	93	87.121	ENSMPUG00000008843	MBD1	96	71.791	Mustela_putorius_furo
ENSPCAG00000001648	MBD1	93	84.848	ENSMLUG00000008286	MBD1	96	69.683	Myotis_lucifugus
ENSPCAG00000001648	MBD1	98	59.638	ENSNGAG00000011412	Mbd1	96	59.638	Nannospalax_galili
ENSPCAG00000001648	MBD1	98	59.966	ENSNLEG00000032711	-	89	59.966	Nomascus_leucogenys
ENSPCAG00000001648	MBD1	93	86.260	ENSNLEG00000011661	-	99	76.033	Nomascus_leucogenys
ENSPCAG00000001648	MBD1	99	63.907	ENSOPRG00000007647	MBD1	99	63.907	Ochotona_princeps
ENSPCAG00000001648	MBD1	99	62.895	ENSODEG00000018451	MBD1	97	63.545	Octodon_degus
ENSPCAG00000001648	MBD1	75	54.613	ENSOANG00000014593	-	100	45.849	Ornithorhynchus_anatinus
ENSPCAG00000001648	MBD1	93	81.818	ENSOCUG00000006554	MBD1	99	67.619	Oryctolagus_cuniculus
ENSPCAG00000001648	MBD1	93	85.283	ENSOGAG00000003784	MBD1	96	69.171	Otolemur_garnettii
ENSPCAG00000001648	MBD1	93	87.500	ENSOARG00000004218	MBD1	85	87.500	Ovis_aries
ENSPCAG00000001648	MBD1	99	76.529	ENSPPAG00000038886	MBD1	99	76.529	Pan_paniscus
ENSPCAG00000001648	MBD1	93	88.258	ENSPPRG00000021387	MBD1	99	78.878	Panthera_pardus
ENSPCAG00000001648	MBD1	93	88.258	ENSPTIG00000021231	MBD1	99	78.878	Panthera_tigris_altaica
ENSPCAG00000001648	MBD1	93	86.260	ENSPTRG00000010021	MBD1	99	76.529	Pan_troglodytes
ENSPCAG00000001648	MBD1	93	86.260	ENSPANG00000010867	MBD1	99	73.016	Papio_anubis
ENSPCAG00000001648	MBD1	89	58.879	ENSPEMG00000022630	Mbd1	96	58.879	Peromyscus_maniculatus_bairdii
ENSPCAG00000001648	MBD1	84	57.576	ENSPCIG00000027937	-	69	57.576	Phascolarctos_cinereus
ENSPCAG00000001648	MBD1	99	76.529	ENSPPYG00000009158	MBD1	91	76.529	Pongo_abelii
ENSPCAG00000001648	MBD1	99	77.025	ENSPCOG00000012450	MBD1	99	77.025	Propithecus_coquereli
ENSPCAG00000001648	MBD1	72	67.490	ENSRNOG00000024104	Mbd1	86	68.145	Rattus_norvegicus
ENSPCAG00000001648	MBD1	93	77.152	ENSRBIG00000041294	MBD1	99	68.430	Rhinopithecus_bieti
ENSPCAG00000001648	MBD1	93	85.878	ENSRROG00000032517	MBD1	99	76.033	Rhinopithecus_roxellana
ENSPCAG00000001648	MBD1	93	82.482	ENSSBOG00000027169	MBD1	85	86.364	Saimiri_boliviensis_boliviensis
ENSPCAG00000001648	MBD1	76	44.540	ENSSHAG00000003661	-	100	44.776	Sarcophilus_harrisii
ENSPCAG00000001648	MBD1	90	88.213	ENSSSCG00000004516	MBD1	99	76.159	Sus_scrofa
ENSPCAG00000001648	MBD1	69	72.245	ENSTBEG00000012651	-	69	72.245	Tupaia_belangeri
ENSPCAG00000001648	MBD1	99	76.403	ENSTTRG00000015523	MBD1	99	76.403	Tursiops_truncatus
ENSPCAG00000001648	MBD1	90	87.833	ENSUAMG00000004752	MBD1	99	75.993	Ursus_americanus
ENSPCAG00000001648	MBD1	93	87.879	ENSUMAG00000002947	MBD1	99	78.218	Ursus_maritimus