EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001741 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 95914 bases
Position: chrGeneScaffold_3724:1357-97270
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001652	RNA_bind	PF08675.11	9e-15	1	1
ENSPCAP00000001652	CAF1	PF04857.20	1.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001757	PARN-201	1818	-	ENSPCAP00000001652	605 (aa)	-	UPI00018AF624

Gene Model

Click here to download ENSPCAG00000001741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001741	PARN	100	83.003	ENSG00000140694	PARN	93	96.154	Homo_sapiens
ENSPCAG00000001741	PARN	100	82.013	ENSAMEG00000011208	PARN	95	82.013	Ailuropoda_melanoleuca
ENSPCAG00000001741	PARN	82	66.203	ENSACIG00000000619	parn	78	66.203	Amphilophus_citrinellus
ENSPCAG00000001741	PARN	85	67.054	ENSAOCG00000003465	parn	75	67.054	Amphiprion_ocellaris
ENSPCAG00000001741	PARN	80	65.779	ENSAPEG00000010661	parn	93	65.779	Amphiprion_percula
ENSPCAG00000001741	PARN	90	65.209	ENSATEG00000004661	parn	78	65.209	Anabas_testudineus
ENSPCAG00000001741	PARN	100	74.545	ENSAPLG00000013914	PARN	95	74.545	Anas_platyrhynchos
ENSPCAG00000001741	PARN	100	67.423	ENSACAG00000004973	PARN	95	68.599	Anolis_carolinensis
ENSPCAG00000001741	PARN	100	82.013	ENSANAG00000031516	PARN	93	96.154	Aotus_nancymaae
ENSPCAG00000001741	PARN	92	64.158	ENSACLG00000004742	parn	80	64.158	Astatotilapia_calliptera
ENSPCAG00000001741	PARN	100	57.614	ENSAMXG00000012390	parn	87	61.993	Astyanax_mexicanus
ENSPCAG00000001741	PARN	100	83.140	ENSBTAG00000018097	PARN	100	82.322	Bos_taurus
ENSPCAG00000001741	PARN	100	82.673	ENSCJAG00000015866	PARN	93	96.154	Callithrix_jacchus
ENSPCAG00000001741	PARN	100	82.479	ENSCAFG00000018795	PARN	95	82.479	Canis_familiaris
ENSPCAG00000001741	PARN	100	82.314	ENSCAFG00020024126	PARN	95	82.314	Canis_lupus_dingo
ENSPCAG00000001741	PARN	100	83.140	ENSCHIG00000018143	PARN	95	83.140	Capra_hircus
ENSPCAG00000001741	PARN	71	56.659	ENSCAPG00000007984	PARN	70	56.659	Cavia_aperea
ENSPCAG00000001741	PARN	100	79.504	ENSCPOG00000002263	PARN	95	79.504	Cavia_porcellus
ENSPCAG00000001741	PARN	100	82.838	ENSCCAG00000030367	PARN	93	96.154	Cebus_capucinus
ENSPCAG00000001741	PARN	85	88.736	ENSCATG00000041368	PARN	86	96.154	Cercocebus_atys
ENSPCAG00000001741	PARN	100	79.835	ENSCLAG00000015406	PARN	95	79.835	Chinchilla_lanigera
ENSPCAG00000001741	PARN	100	83.333	ENSCSAG00000008142	PARN	95	82.508	Chlorocebus_sabaeus
ENSPCAG00000001741	PARN	91	83.333	ENSCHOG00000007014	PARN	90	83.333	Choloepus_hoffmanni
ENSPCAG00000001741	PARN	90	74.081	ENSCPBG00000006609	PARN	94	74.081	Chrysemys_picta_bellii
ENSPCAG00000001741	PARN	70	41.778	ENSCING00000010142	-	85	41.778	Ciona_intestinalis
ENSPCAG00000001741	PARN	100	71.244	ENSCANG00000028849	-	93	96.154	Colobus_angolensis_palliatus
ENSPCAG00000001741	PARN	100	74.092	ENSCGRG00001012096	Parn	95	74.092	Cricetulus_griseus_chok1gshd
ENSPCAG00000001741	PARN	100	74.092	ENSCGRG00000004939	Parn	95	74.092	Cricetulus_griseus_crigri
ENSPCAG00000001741	PARN	82	65.873	ENSCSEG00000002064	parn	83	62.032	Cynoglossus_semilaevis
ENSPCAG00000001741	PARN	82	67.594	ENSCVAG00000014848	parn	78	63.521	Cyprinodon_variegatus
ENSPCAG00000001741	PARN	100	56.000	ENSDARG00000102634	parn	87	59.266	Danio_rerio
ENSPCAG00000001741	PARN	100	83.471	ENSDNOG00000000833	PARN	95	83.471	Dasypus_novemcinctus
ENSPCAG00000001741	PARN	68	85.590	ENSETEG00000014828	-	67	85.590	Echinops_telfairi
ENSPCAG00000001741	PARN	100	82.479	ENSEASG00005011400	PARN	95	82.479	Equus_asinus_asinus
ENSPCAG00000001741	PARN	100	82.314	ENSECAG00000017792	PARN	95	82.314	Equus_caballus
ENSPCAG00000001741	PARN	86	80.851	ENSEEUG00000010370	PARN	81	80.851	Erinaceus_europaeus
ENSPCAG00000001741	PARN	90	63.818	ENSELUG00000013139	parn	71	63.818	Esox_lucius
ENSPCAG00000001741	PARN	100	82.645	ENSFCAG00000044961	PARN	93	100.000	Felis_catus
ENSPCAG00000001741	PARN	100	73.388	ENSFALG00000003911	PARN	94	73.388	Ficedula_albicollis
ENSPCAG00000001741	PARN	100	78.347	ENSFDAG00000009234	PARN	95	78.347	Fukomys_damarensis
ENSPCAG00000001741	PARN	91	56.912	ENSFHEG00000013738	parn	84	56.912	Fundulus_heteroclitus
ENSPCAG00000001741	PARN	82	66.004	ENSGMOG00000003231	parn	91	66.004	Gadus_morhua
ENSPCAG00000001741	PARN	100	72.231	ENSGALG00000003091	PARN	95	72.231	Gallus_gallus
ENSPCAG00000001741	PARN	82	67.129	ENSGAFG00000011061	parn	79	62.633	Gambusia_affinis
ENSPCAG00000001741	PARN	100	60.820	ENSGACG00000019501	parn	95	60.656	Gasterosteus_aculeatus
ENSPCAG00000001741	PARN	54	71.692	ENSGAGG00000023281	PARN	83	71.692	Gopherus_agassizii
ENSPCAG00000001741	PARN	97	83.503	ENSGGOG00000025224	PARN	92	96.154	Gorilla_gorilla
ENSPCAG00000001741	PARN	92	64.158	ENSHBUG00000017906	parn	84	67.262	Haplochromis_burtoni
ENSPCAG00000001741	PARN	100	78.678	ENSHGLG00000010886	PARN	95	78.678	Heterocephalus_glaber_female
ENSPCAG00000001741	PARN	100	78.678	ENSHGLG00100014659	PARN	95	78.678	Heterocephalus_glaber_male
ENSPCAG00000001741	PARN	82	64.370	ENSHCOG00000008683	parn	86	63.583	Hippocampus_comes
ENSPCAG00000001741	PARN	100	50.080	ENSIPUG00000012401	parn	74	57.800	Ictalurus_punctatus
ENSPCAG00000001741	PARN	100	80.165	ENSSTOG00000007519	PARN	95	80.000	Ictidomys_tridecemlineatus
ENSPCAG00000001741	PARN	100	77.025	ENSJJAG00000023049	Parn	95	77.025	Jaculus_jaculus
ENSPCAG00000001741	PARN	90	64.130	ENSKMAG00000009462	parn	78	64.130	Kryptolebias_marmoratus
ENSPCAG00000001741	PARN	92	62.679	ENSLBEG00000009167	parn	85	62.679	Labrus_bergylta
ENSPCAG00000001741	PARN	70	74.468	ENSLACG00000004207	PARN	91	70.312	Latimeria_chalumnae
ENSPCAG00000001741	PARN	94	65.905	ENSLOCG00000000715	parn	82	65.905	Lepisosteus_oculatus
ENSPCAG00000001741	PARN	100	84.628	ENSLAFG00000015036	PARN	95	84.628	Loxodonta_africana
ENSPCAG00000001741	PARN	100	78.418	ENSMFAG00000044852	PARN	93	96.154	Macaca_fascicularis
ENSPCAG00000001741	PARN	100	83.003	ENSMMUG00000018849	PARN	93	96.154	Macaca_mulatta
ENSPCAG00000001741	PARN	100	83.168	ENSMNEG00000045108	PARN	93	96.154	Macaca_nemestrina
ENSPCAG00000001741	PARN	100	83.003	ENSMLEG00000031743	PARN	93	96.154	Mandrillus_leucophaeus
ENSPCAG00000001741	PARN	82	67.793	ENSMAMG00000006939	parn	73	67.793	Mastacembelus_armatus
ENSPCAG00000001741	PARN	92	64.158	ENSMZEG00005013590	parn	90	63.687	Maylandia_zebra
ENSPCAG00000001741	PARN	100	72.231	ENSMGAG00000001004	PARN	95	72.231	Meleagris_gallopavo
ENSPCAG00000001741	PARN	96	70.798	ENSMAUG00000008025	Parn	94	70.798	Mesocricetus_auratus
ENSPCAG00000001741	PARN	100	82.810	ENSMICG00000016053	PARN	93	100.000	Microcebus_murinus
ENSPCAG00000001741	PARN	72	81.839	ENSMOCG00000022211	Parn	88	81.839	Microtus_ochrogaster
ENSPCAG00000001741	PARN	82	65.936	ENSMMOG00000011333	parn	81	65.936	Mola_mola
ENSPCAG00000001741	PARN	72	85.812	ENSMODG00000004915	PARN	88	85.812	Monodelphis_domestica
ENSPCAG00000001741	PARN	90	65.027	ENSMALG00000019426	parn	85	68.986	Monopterus_albus
ENSPCAG00000001741	PARN	100	74.876	MGP_CAROLIEiJ_G0020466	Parn	95	74.876	Mus_caroli
ENSPCAG00000001741	PARN	100	74.711	ENSMUSG00000022685	Parn	95	74.711	Mus_musculus
ENSPCAG00000001741	PARN	100	74.876	MGP_PahariEiJ_G0016172	Parn	95	74.876	Mus_pahari
ENSPCAG00000001741	PARN	100	74.876	MGP_SPRETEiJ_G0021361	Parn	95	74.876	Mus_spretus
ENSPCAG00000001741	PARN	100	82.645	ENSMPUG00000014464	PARN	95	82.645	Mustela_putorius_furo
ENSPCAG00000001741	PARN	72	86.239	ENSMLUG00000005414	PARN	88	86.239	Myotis_lucifugus
ENSPCAG00000001741	PARN	82	66.667	ENSNBRG00000006805	parn	85	66.667	Neolamprologus_brichardi
ENSPCAG00000001741	PARN	100	83.003	ENSNLEG00000010241	PARN	93	96.154	Nomascus_leucogenys
ENSPCAG00000001741	PARN	88	76.536	ENSMEUG00000008178	-	84	76.536	Notamacropus_eugenii
ENSPCAG00000001741	PARN	100	75.041	ENSOPRG00000012187	PARN	96	75.041	Ochotona_princeps
ENSPCAG00000001741	PARN	100	71.057	ENSODEG00000001617	PARN	94	71.057	Octodon_degus
ENSPCAG00000001741	PARN	100	60.383	ENSONIG00000000151	parn	78	68.972	Oreochromis_niloticus
ENSPCAG00000001741	PARN	59	74.722	ENSOANG00000020155	-	92	75.278	Ornithorhynchus_anatinus
ENSPCAG00000001741	PARN	100	80.826	ENSOCUG00000000322	PARN	95	80.826	Oryctolagus_cuniculus
ENSPCAG00000001741	PARN	95	62.045	ENSORLG00020010313	parn	84	62.045	Oryzias_latipes_hni
ENSPCAG00000001741	PARN	95	61.872	ENSORLG00015000300	parn	84	61.872	Oryzias_latipes_hsok
ENSPCAG00000001741	PARN	91	63.734	ENSOMEG00000019555	parn	81	66.310	Oryzias_melastigma
ENSPCAG00000001741	PARN	72	83.524	ENSOGAG00000014626	PARN	88	83.524	Otolemur_garnettii
ENSPCAG00000001741	PARN	72	88.761	ENSOARG00000007574	PARN	88	88.761	Ovis_aries
ENSPCAG00000001741	PARN	100	82.673	ENSPPAG00000031438	PARN	93	96.154	Pan_paniscus
ENSPCAG00000001741	PARN	100	82.645	ENSPPRG00000018583	PARN	93	100.000	Panthera_pardus
ENSPCAG00000001741	PARN	100	82.645	ENSPTIG00000012135	PARN	93	100.000	Panthera_tigris_altaica
ENSPCAG00000001741	PARN	100	82.673	ENSPTRG00000007792	PARN	93	96.154	Pan_troglodytes
ENSPCAG00000001741	PARN	100	79.703	ENSPANG00000020099	PARN	93	96.154	Papio_anubis
ENSPCAG00000001741	PARN	90	65.511	ENSPKIG00000022807	parn	86	62.770	Paramormyrops_kingsleyae
ENSPCAG00000001741	PARN	97	73.514	ENSPSIG00000014804	PARN	100	72.617	Pelodiscus_sinensis
ENSPCAG00000001741	PARN	79	66.250	ENSPMGG00000014431	parn	72	63.916	Periophthalmus_magnuspinnatus
ENSPCAG00000001741	PARN	100	74.876	ENSPEMG00000018439	Parn	95	74.876	Peromyscus_maniculatus_bairdii
ENSPCAG00000001741	PARN	80	59.548	ENSPMAG00000003956	parn	92	59.548	Petromyzon_marinus
ENSPCAG00000001741	PARN	65	76.726	ENSPCIG00000001259	PARN	84	76.923	Phascolarctos_cinereus
ENSPCAG00000001741	PARN	82	67.396	ENSPFOG00000012823	parn	79	62.679	Poecilia_formosa
ENSPCAG00000001741	PARN	82	67.396	ENSPLAG00000006395	parn	79	62.679	Poecilia_latipinna
ENSPCAG00000001741	PARN	82	67.197	ENSPMEG00000007711	parn	79	62.321	Poecilia_mexicana
ENSPCAG00000001741	PARN	82	66.998	ENSPREG00000000147	parn	79	62.143	Poecilia_reticulata
ENSPCAG00000001741	PARN	100	82.730	ENSPPYG00000007123	PARN	95	81.908	Pongo_abelii
ENSPCAG00000001741	PARN	100	79.669	ENSPCOG00000019292	PARN	93	100.000	Propithecus_coquereli
ENSPCAG00000001741	PARN	100	79.339	ENSPVAG00000002547	PARN	96	79.339	Pteropus_vampyrus
ENSPCAG00000001741	PARN	92	64.158	ENSPNYG00000006835	parn	90	64.126	Pundamilia_nyererei
ENSPCAG00000001741	PARN	98	56.340	ENSPNAG00000018905	parn	84	63.516	Pygocentrus_nattereri
ENSPCAG00000001741	PARN	100	73.034	ENSRNOG00000002912	Parn	98	86.869	Rattus_norvegicus
ENSPCAG00000001741	PARN	55	83.183	ENSRBIG00000018726	PARN	100	81.682	Rhinopithecus_bieti
ENSPCAG00000001741	PARN	55	83.183	ENSRROG00000011162	-	100	81.682	Rhinopithecus_roxellana
ENSPCAG00000001741	PARN	100	81.518	ENSSBOG00000034726	PARN	93	96.154	Saimiri_boliviensis_boliviensis
ENSPCAG00000001741	PARN	64	84.359	ENSSHAG00000008493	PARN	87	84.359	Sarcophilus_harrisii
ENSPCAG00000001741	PARN	96	63.040	ENSSFOG00015014165	parn	83	68.072	Scleropages_formosus
ENSPCAG00000001741	PARN	82	66.402	ENSSMAG00000000685	parn	82	61.297	Scophthalmus_maximus
ENSPCAG00000001741	PARN	85	66.411	ENSSDUG00000014555	parn	78	63.884	Seriola_dumerili
ENSPCAG00000001741	PARN	81	87.042	ENSSARG00000014339	PARN	85	87.042	Sorex_araneus
ENSPCAG00000001741	PARN	100	74.711	ENSSPUG00000007719	PARN	95	74.711	Sphenodon_punctatus
ENSPCAG00000001741	PARN	90	65.091	ENSSPAG00000007095	parn	83	62.791	Stegastes_partitus
ENSPCAG00000001741	PARN	100	81.818	ENSSSCG00000007878	PARN	85	81.818	Sus_scrofa
ENSPCAG00000001741	PARN	100	73.223	ENSTGUG00000004971	PARN	95	73.223	Taeniopygia_guttata
ENSPCAG00000001741	PARN	100	60.196	ENSTNIG00000008252	parn	95	59.869	Tetraodon_nigroviridis
ENSPCAG00000001741	PARN	96	67.530	ENSTBEG00000010407	PARN	100	67.530	Tupaia_belangeri
ENSPCAG00000001741	PARN	100	78.678	ENSTTRG00000002843	PARN	96	78.678	Tursiops_truncatus
ENSPCAG00000001741	PARN	67	76.471	ENSUAMG00000008283	PARN	88	75.854	Ursus_americanus
ENSPCAG00000001741	PARN	100	82.479	ENSUMAG00000004527	PARN	95	82.479	Ursus_maritimus
ENSPCAG00000001741	PARN	97	85.324	ENSVPAG00000008968	PARN	93	85.140	Vicugna_pacos
ENSPCAG00000001741	PARN	100	82.645	ENSVVUG00000019509	PARN	95	82.645	Vulpes_vulpes
ENSPCAG00000001741	PARN	100	65.950	ENSXETG00000010994	parn	94	72.617	Xenopus_tropicalis
ENSPCAG00000001741	PARN	82	62.698	ENSXCOG00000015990	parn	91	58.602	Xiphophorus_couchianus
ENSPCAG00000001741	PARN	91	62.745	ENSXMAG00000014783	parn	79	62.745	Xiphophorus_maculatus