EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000001848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 1101 bases
Position: chrscaffold_69222:10678-11778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001724	APOBEC_N	PF08210.11	2.1e-33	1	1
ENSPCAP00000001724	APOBEC_C	PF05240.14	3.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001833	-	414	-	ENSPCAP00000001724	137 (aa)	-	UPI00018AD2E3

Gene Model

Click here to download ENSPCAG00000001848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000001848	-	70	32.000	ENSPCAG00000011433	APOBEC2	59	31.579
ENSPCAG00000001848	-	99	64.885	ENSPCAG00000015518	-	57	64.885
ENSPCAG00000001848	-	91	42.400	ENSPCAG00000015655	-	72	42.400
ENSPCAG00000001848	-	81	36.283	ENSPCAG00000008733	APOBEC1	60	36.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001848	-	94	53.488	ENSG00000239713	APOBEC3G	67	53.488	Homo_sapiens
ENSPCAG00000001848	-	91	50.000	ENSAMEG00000010815	-	58	50.000	Ailuropoda_melanoleuca
ENSPCAG00000001848	-	97	48.333	ENSANAG00000028416	-	67	48.333	Aotus_nancymaae
ENSPCAG00000001848	-	97	52.800	ENSANAG00000031271	APOBEC3G	69	52.800	Aotus_nancymaae
ENSPCAG00000001848	-	97	50.000	ENSANAG00000027961	-	76	50.000	Aotus_nancymaae
ENSPCAG00000001848	-	93	58.594	ENSANAG00000020573	-	64	58.594	Aotus_nancymaae
ENSPCAG00000001848	-	93	47.692	ENSBTAG00000037800	-	70	47.692	Bos_taurus
ENSPCAG00000001848	-	97	51.200	ENSCJAG00000023368	APOBEC3G	68	51.200	Callithrix_jacchus
ENSPCAG00000001848	-	91	45.600	ENSCAFG00000023589	-	89	45.600	Canis_familiaris
ENSPCAG00000001848	-	91	45.600	ENSCAFG00020002661	-	54	45.600	Canis_lupus_dingo
ENSPCAG00000001848	-	91	45.600	ENSCAFG00020002641	-	54	45.600	Canis_lupus_dingo
ENSPCAG00000001848	-	91	48.438	ENSCHIG00000012694	-	63	48.031	Capra_hircus
ENSPCAG00000001848	-	96	59.036	ENSCCAG00000033147	-	65	55.200	Cebus_capucinus
ENSPCAG00000001848	-	91	60.000	ENSCCAG00000030928	-	61	60.000	Cebus_capucinus
ENSPCAG00000001848	-	97	42.742	ENSCCAG00000032509	-	68	42.742	Cebus_capucinus
ENSPCAG00000001848	-	94	50.806	ENSCCAG00000032232	-	68	50.806	Cebus_capucinus
ENSPCAG00000001848	-	96	53.271	ENSCSAG00000006376	APOBEC3G	59	53.271	Chlorocebus_sabaeus
ENSPCAG00000001848	-	80	37.607	ENSDNOG00000039749	-	50	38.393	Dasypus_novemcinctus
ENSPCAG00000001848	-	96	51.128	ENSEASG00005018643	-	58	51.128	Equus_asinus_asinus
ENSPCAG00000001848	-	96	58.647	ENSECAG00000022371	APOBEC3Z1B	59	58.647	Equus_caballus
ENSPCAG00000001848	-	91	53.982	ENSGGOG00000013750	APOBEC3G	65	53.982	Gorilla_gorilla
ENSPCAG00000001848	-	91	61.600	ENSLAFG00000008890	-	63	61.600	Loxodonta_africana
ENSPCAG00000001848	-	91	68.800	ENSLAFG00000020906	-	61	68.800	Loxodonta_africana
ENSPCAG00000001848	-	94	68.217	ENSLAFG00000005275	-	72	68.217	Loxodonta_africana
ENSPCAG00000001848	-	96	51.908	ENSMFAG00000044711	APOBEC3G	61	51.908	Macaca_fascicularis
ENSPCAG00000001848	-	99	51.111	ENSMMUG00000039346	APOBEC3G	66	53.782	Macaca_mulatta
ENSPCAG00000001848	-	99	51.111	ENSMNEG00000038847	APOBEC3G	67	51.111	Macaca_nemestrina
ENSPCAG00000001848	-	96	51.908	ENSMLEG00000024444	APOBEC3G	65	51.908	Mandrillus_leucophaeus
ENSPCAG00000001848	-	91	56.000	ENSMICG00000043748	-	62	56.000	Microcebus_murinus
ENSPCAG00000001848	-	92	56.349	ENSMICG00000047191	-	65	56.349	Microcebus_murinus
ENSPCAG00000001848	-	91	52.800	ENSMPUG00000013235	-	65	52.800	Mustela_putorius_furo
ENSPCAG00000001848	-	91	53.226	ENSMLUG00000000977	-	67	53.226	Myotis_lucifugus
ENSPCAG00000001848	-	91	59.048	ENSMLUG00000026771	-	56	59.048	Myotis_lucifugus
ENSPCAG00000001848	-	81	49.550	ENSMLUG00000022226	-	82	49.550	Myotis_lucifugus
ENSPCAG00000001848	-	80	56.881	ENSMLUG00000000517	-	62	56.881	Myotis_lucifugus
ENSPCAG00000001848	-	91	60.241	ENSMLUG00000008631	-	76	60.241	Myotis_lucifugus
ENSPCAG00000001848	-	94	55.039	ENSMLUG00000014565	-	70	55.039	Myotis_lucifugus
ENSPCAG00000001848	-	94	49.612	ENSMLUG00000024853	-	81	49.612	Myotis_lucifugus
ENSPCAG00000001848	-	94	51.163	ENSMLUG00000024957	-	61	51.163	Myotis_lucifugus
ENSPCAG00000001848	-	95	54.615	ENSMLUG00000023022	-	60	54.615	Myotis_lucifugus
ENSPCAG00000001848	-	95	51.111	ENSNLEG00000018922	-	77	51.111	Nomascus_leucogenys
ENSPCAG00000001848	-	93	56.250	ENSOPRG00000002326	-	70	56.250	Ochotona_princeps
ENSPCAG00000001848	-	90	56.098	ENSOGAG00000024822	-	60	56.098	Otolemur_garnettii
ENSPCAG00000001848	-	93	59.375	ENSOGAG00000032518	-	66	59.375	Otolemur_garnettii
ENSPCAG00000001848	-	93	49.231	ENSOARG00000016213	APOBEC3Z1	70	49.231	Ovis_aries
ENSPCAG00000001848	-	91	54.400	ENSPPAG00000033277	-	62	54.400	Pan_paniscus
ENSPCAG00000001848	-	94	53.488	ENSPTRG00000014387	APOBEC3G	67	53.488	Pan_troglodytes
ENSPCAG00000001848	-	100	51.095	ENSPPYG00000011833	APOBEC3G	64	51.095	Pongo_abelii
ENSPCAG00000001848	-	91	53.226	ENSPCOG00000016357	-	61	53.226	Propithecus_coquereli
ENSPCAG00000001848	-	94	56.589	ENSPVAG00000004045	-	65	56.589	Pteropus_vampyrus
ENSPCAG00000001848	-	99	50.000	ENSRBIG00000035436	APOBEC3G	77	50.000	Rhinopithecus_bieti
ENSPCAG00000001848	-	97	57.463	ENSSBOG00000029091	-	65	57.463	Saimiri_boliviensis_boliviensis
ENSPCAG00000001848	-	91	56.000	ENSSBOG00000018208	-	79	56.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000001848	-	97	46.721	ENSSBOG00000025673	-	65	46.721	Saimiri_boliviensis_boliviensis
ENSPCAG00000001848	-	97	54.839	ENSSBOG00000021384	-	68	54.839	Saimiri_boliviensis_boliviensis
ENSPCAG00000001848	-	97	52.800	ENSSBOG00000023468	-	55	52.800	Saimiri_boliviensis_boliviensis
ENSPCAG00000001848	-	97	52.419	ENSSBOG00000026566	-	68	52.419	Saimiri_boliviensis_boliviensis
ENSPCAG00000001848	-	80	55.046	ENSTTRG00000009395	-	55	55.046	Tursiops_truncatus
ENSPCAG00000001848	-	91	48.062	ENSUMAG00000014447	-	65	48.062	Ursus_maritimus
ENSPCAG00000001848	-	93	47.368	ENSUMAG00000002249	-	65	47.368	Ursus_maritimus