EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001852 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 9154 bases
Position: chrGeneScaffold_1611:5868-15021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001727	PPR	PF01535.20	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000001836	-	1953	-	ENSPCAP00000001727	650 (aa)	-	UPI00018ADEB2

Gene Model

Click here to download ENSPCAG00000001852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001852	-	88	72.644	ENSG00000106246	PTCD1	81	72.644	Homo_sapiens
ENSPCAG00000001852	-	88	72.644	ENSG00000248919	ATP5MF-PTCD1	76	72.644	Homo_sapiens
ENSPCAG00000001852	-	76	54.167	ENSAPOG00000010679	ptcd1	74	54.167	Acanthochromis_polyacanthus
ENSPCAG00000001852	-	89	81.690	ENSAMEG00000006224	-	75	81.690	Ailuropoda_melanoleuca
ENSPCAG00000001852	-	83	59.055	ENSACIG00000017861	ptcd1	77	59.055	Amphilophus_citrinellus
ENSPCAG00000001852	-	76	55.556	ENSAOCG00000022617	ptcd1	71	55.556	Amphiprion_ocellaris
ENSPCAG00000001852	-	80	55.556	ENSAOCG00000020741	-	71	55.556	Amphiprion_ocellaris
ENSPCAG00000001852	-	80	55.556	ENSAPEG00000022632	ptcd1	71	55.556	Amphiprion_percula
ENSPCAG00000001852	-	83	59.259	ENSATEG00000007016	ptcd1	73	59.259	Anabas_testudineus
ENSPCAG00000001852	-	83	61.947	ENSAPLG00000006862	-	84	60.000	Anas_platyrhynchos
ENSPCAG00000001852	-	86	59.864	ENSACAG00000012871	-	73	59.864	Anolis_carolinensis
ENSPCAG00000001852	-	86	76.056	ENSANAG00000035790	-	81	76.056	Aotus_nancymaae
ENSPCAG00000001852	-	83	52.667	ENSACLG00000002824	ptcd1	75	52.667	Astatotilapia_calliptera
ENSPCAG00000001852	-	84	52.239	ENSAMXG00000037292	ptcd1	79	52.239	Astyanax_mexicanus
ENSPCAG00000001852	-	89	81.560	ENSBTAG00000020440	-	71	81.560	Bos_taurus
ENSPCAG00000001852	-	88	76.056	ENSCJAG00000015815	-	82	76.056	Callithrix_jacchus
ENSPCAG00000001852	-	89	81.690	ENSCAFG00000015055	-	76	81.690	Canis_familiaris
ENSPCAG00000001852	-	89	81.690	ENSCAFG00020014480	-	75	81.690	Canis_lupus_dingo
ENSPCAG00000001852	-	89	80.851	ENSCHIG00000027000	-	80	80.851	Capra_hircus
ENSPCAG00000001852	-	88	80.576	ENSTSYG00000029495	-	81	80.142	Carlito_syrichta
ENSPCAG00000001852	-	89	80.986	ENSCAPG00000014660	-	88	80.986	Cavia_aperea
ENSPCAG00000001852	-	89	80.282	ENSCPOG00000001780	-	81	80.282	Cavia_porcellus
ENSPCAG00000001852	-	88	76.056	ENSCCAG00000034025	-	82	76.056	Cebus_capucinus
ENSPCAG00000001852	-	88	72.936	ENSCATG00000040859	-	81	74.286	Cercocebus_atys
ENSPCAG00000001852	-	87	78.873	ENSCLAG00000006354	-	81	78.873	Chinchilla_lanigera
ENSPCAG00000001852	-	79	72.533	ENSCSAG00000017794	-	75	72.533	Chlorocebus_sabaeus
ENSPCAG00000001852	-	84	60.606	ENSCPBG00000020866	-	77	60.606	Chrysemys_picta_bellii
ENSPCAG00000001852	-	77	38.261	ENSCING00000007717	-	83	38.261	Ciona_intestinalis
ENSPCAG00000001852	-	88	71.560	ENSCANG00000023441	-	81	71.560	Colobus_angolensis_palliatus
ENSPCAG00000001852	-	88	72.143	ENSCGRG00001023686	Ptcd1	80	72.143	Cricetulus_griseus_chok1gshd
ENSPCAG00000001852	-	88	72.143	ENSCGRG00000015031	Ptcd1	80	72.143	Cricetulus_griseus_crigri
ENSPCAG00000001852	-	85	47.857	ENSCSEG00000002378	ptcd1	76	47.857	Cynoglossus_semilaevis
ENSPCAG00000001852	-	82	62.393	ENSCVAG00000003621	ptcd1	77	62.393	Cyprinodon_variegatus
ENSPCAG00000001852	-	80	62.393	ENSCVAG00000015826	ptcd1	71	62.393	Cyprinodon_variegatus
ENSPCAG00000001852	-	84	60.484	ENSDARG00000076176	ptcd1	78	60.484	Danio_rerio
ENSPCAG00000001852	-	85	84.167	ENSDNOG00000009957	-	80	80.882	Dasypus_novemcinctus
ENSPCAG00000001852	-	86	72.143	ENSDORG00000000740	Ptcd1	81	72.143	Dipodomys_ordii
ENSPCAG00000001852	-	70	72.340	ENSEBUG00000014515	ptcd1	84	72.340	Eptatretus_burgeri
ENSPCAG00000001852	-	89	83.803	ENSEASG00005002480	-	81	83.803	Equus_asinus_asinus
ENSPCAG00000001852	-	89	83.803	ENSECAG00000016617	-	81	83.803	Equus_caballus
ENSPCAG00000001852	-	80	60.000	ENSELUG00000016517	ptcd1	72	60.000	Esox_lucius
ENSPCAG00000001852	-	89	77.465	ENSFCAG00000015069	-	81	77.465	Felis_catus
ENSPCAG00000001852	-	84	65.487	ENSFALG00000013803	-	78	63.333	Ficedula_albicollis
ENSPCAG00000001852	-	89	74.648	ENSFDAG00000006393	-	81	74.648	Fukomys_damarensis
ENSPCAG00000001852	-	74	77.083	ENSFHEG00000012491	ptcd1	78	77.083	Fundulus_heteroclitus
ENSPCAG00000001852	-	79	54.545	ENSGMOG00000007639	ptcd1	79	54.545	Gadus_morhua
ENSPCAG00000001852	-	82	64.602	ENSGALG00000004711	-	76	63.333	Gallus_gallus
ENSPCAG00000001852	-	81	60.484	ENSGAFG00000013175	ptcd1	73	60.484	Gambusia_affinis
ENSPCAG00000001852	-	82	52.273	ENSGACG00000016607	ptcd1	80	52.273	Gasterosteus_aculeatus
ENSPCAG00000001852	-	79	58.955	ENSGAGG00000021832	-	77	59.701	Gopherus_agassizii
ENSPCAG00000001852	-	88	73.041	ENSGGOG00000015123	-	81	73.041	Gorilla_gorilla
ENSPCAG00000001852	-	83	52.667	ENSHBUG00000018275	ptcd1	75	52.667	Haplochromis_burtoni
ENSPCAG00000001852	-	89	76.596	ENSHGLG00000017621	-	81	76.596	Heterocephalus_glaber_female
ENSPCAG00000001852	-	89	76.596	ENSHGLG00100007218	-	81	76.596	Heterocephalus_glaber_male
ENSPCAG00000001852	-	81	52.000	ENSHCOG00000010784	ptcd1	72	52.000	Hippocampus_comes
ENSPCAG00000001852	-	89	77.465	ENSSTOG00000001682	-	80	77.465	Ictidomys_tridecemlineatus
ENSPCAG00000001852	-	89	73.239	ENSJJAG00000000319	Ptcd1	82	73.239	Jaculus_jaculus
ENSPCAG00000001852	-	80	61.538	ENSKMAG00000008708	ptcd1	70	63.025	Kryptolebias_marmoratus
ENSPCAG00000001852	-	84	53.125	ENSLBEG00000008061	ptcd1	74	54.331	Labrus_bergylta
ENSPCAG00000001852	-	84	59.167	ENSLACG00000011172	ptcd1	76	60.833	Latimeria_chalumnae
ENSPCAG00000001852	-	82	56.667	ENSLOCG00000004833	ptcd1	82	56.667	Lepisosteus_oculatus
ENSPCAG00000001852	-	89	79.358	ENSLAFG00000002588	-	80	79.358	Loxodonta_africana
ENSPCAG00000001852	-	88	72.706	ENSMFAG00000041324	-	81	74.286	Macaca_fascicularis
ENSPCAG00000001852	-	88	72.477	ENSMMUG00000030408	-	81	74.286	Macaca_mulatta
ENSPCAG00000001852	-	88	72.936	ENSMNEG00000043786	-	81	74.286	Macaca_nemestrina
ENSPCAG00000001852	-	87	72.143	ENSMLEG00000031179	-	90	74.286	Mandrillus_leucophaeus
ENSPCAG00000001852	-	83	56.115	ENSMAMG00000007623	ptcd1	73	56.115	Mastacembelus_armatus
ENSPCAG00000001852	-	83	52.667	ENSMZEG00005012722	ptcd1	75	52.667	Maylandia_zebra
ENSPCAG00000001852	-	86	55.172	ENSMGAG00000004211	-	74	55.172	Meleagris_gallopavo
ENSPCAG00000001852	-	88	81.481	ENSMICG00000017428	-	80	81.481	Microcebus_murinus
ENSPCAG00000001852	-	81	55.556	ENSMMOG00000020243	ptcd1	79	57.143	Mola_mola
ENSPCAG00000001852	-	84	74.359	ENSMODG00000001350	-	75	74.359	Monodelphis_domestica
ENSPCAG00000001852	-	82	55.639	ENSMALG00000018442	ptcd1	72	55.639	Monopterus_albus
ENSPCAG00000001852	-	87	72.275	MGP_CAROLIEiJ_G0028011	Ptcd1	80	72.275	Mus_caroli
ENSPCAG00000001852	-	86	72.381	ENSMUSG00000029624	Ptcd1	80	72.381	Mus_musculus
ENSPCAG00000001852	-	87	72.986	MGP_PahariEiJ_G0024580	Ptcd1	80	72.986	Mus_pahari
ENSPCAG00000001852	-	87	72.512	MGP_SPRETEiJ_G0029012	Ptcd1	80	72.512	Mus_spretus
ENSPCAG00000001852	-	89	76.056	ENSMPUG00000016518	-	81	78.169	Mustela_putorius_furo
ENSPCAG00000001852	-	89	82.394	ENSMLUG00000010994	-	76	83.099	Myotis_lucifugus
ENSPCAG00000001852	-	84	52.667	ENSNBRG00000010079	ptcd1	79	52.667	Neolamprologus_brichardi
ENSPCAG00000001852	-	74	89.130	ENSNLEG00000011060	-	80	89.130	Nomascus_leucogenys
ENSPCAG00000001852	-	86	64.964	ENSMEUG00000006930	-	79	64.964	Notamacropus_eugenii
ENSPCAG00000001852	-	87	75.000	ENSOPRG00000013647	-	80	75.758	Ochotona_princeps
ENSPCAG00000001852	-	80	59.829	ENSONIG00000003168	ptcd1	83	59.829	Oreochromis_niloticus
ENSPCAG00000001852	-	78	62.121	ENSOANG00000007728	-	66	62.121	Ornithorhynchus_anatinus
ENSPCAG00000001852	-	89	76.761	ENSOCUG00000010584	-	79	76.761	Oryctolagus_cuniculus
ENSPCAG00000001852	-	85	52.593	ENSORLG00000009275	ptcd1	77	52.593	Oryzias_latipes
ENSPCAG00000001852	-	85	52.593	ENSORLG00020000988	ptcd1	77	52.593	Oryzias_latipes_hni
ENSPCAG00000001852	-	84	51.852	ENSORLG00015010557	ptcd1	77	51.852	Oryzias_latipes_hsok
ENSPCAG00000001852	-	83	55.645	ENSOMEG00000020627	ptcd1	77	55.645	Oryzias_melastigma
ENSPCAG00000001852	-	86	80.147	ENSOGAG00000010877	-	80	80.147	Otolemur_garnettii
ENSPCAG00000001852	-	89	80.851	ENSOARG00000018676	-	81	80.851	Ovis_aries
ENSPCAG00000001852	-	88	73.333	ENSPPAG00000036024	-	81	73.333	Pan_paniscus
ENSPCAG00000001852	-	89	78.169	ENSPPRG00000003478	-	82	78.169	Panthera_pardus
ENSPCAG00000001852	-	88	73.103	ENSPTRG00000019452	-	81	73.103	Pan_troglodytes
ENSPCAG00000001852	-	88	72.936	ENSPANG00000016730	-	81	74.286	Papio_anubis
ENSPCAG00000001852	-	82	55.752	ENSPKIG00000014215	ptcd1	76	55.752	Paramormyrops_kingsleyae
ENSPCAG00000001852	-	81	56.802	ENSPSIG00000011184	-	87	56.905	Pelodiscus_sinensis
ENSPCAG00000001852	-	69	64.583	ENSPMAG00000009667	ptcd1	85	64.583	Petromyzon_marinus
ENSPCAG00000001852	-	85	74.167	ENSPCIG00000024778	-	76	74.167	Phascolarctos_cinereus
ENSPCAG00000001852	-	82	61.417	ENSPFOG00000004458	ptcd1	72	61.417	Poecilia_formosa
ENSPCAG00000001852	-	81	61.600	ENSPLAG00000011051	ptcd1	72	61.600	Poecilia_latipinna
ENSPCAG00000001852	-	82	60.630	ENSPMEG00000020547	ptcd1	72	60.630	Poecilia_mexicana
ENSPCAG00000001852	-	80	59.200	ENSPREG00000000059	ptcd1	73	59.200	Poecilia_reticulata
ENSPCAG00000001852	-	88	73.333	ENSPPYG00000017377	-	86	73.333	Pongo_abelii
ENSPCAG00000001852	-	88	84.444	ENSPCOG00000018596	-	80	84.444	Propithecus_coquereli
ENSPCAG00000001852	-	52	84.000	ENSPVAG00000007529	-	52	84.000	Pteropus_vampyrus
ENSPCAG00000001852	-	83	54.000	ENSPNYG00000019993	ptcd1	75	54.000	Pundamilia_nyererei
ENSPCAG00000001852	-	85	54.198	ENSPNAG00000014931	ptcd1	82	56.489	Pygocentrus_nattereri
ENSPCAG00000001852	-	86	73.095	ENSRNOG00000000987	Ptcd1	80	73.095	Rattus_norvegicus
ENSPCAG00000001852	-	88	71.789	ENSRBIG00000043393	-	81	71.789	Rhinopithecus_bieti
ENSPCAG00000001852	-	88	72.018	ENSRROG00000036420	-	81	72.018	Rhinopithecus_roxellana
ENSPCAG00000001852	-	88	74.648	ENSSBOG00000024114	-	82	74.648	Saimiri_boliviensis_boliviensis
ENSPCAG00000001852	-	88	67.391	ENSSHAG00000011376	-	85	67.391	Sarcophilus_harrisii
ENSPCAG00000001852	-	85	57.143	ENSSFOG00015007909	ptcd1	74	57.143	Scleropages_formosus
ENSPCAG00000001852	-	84	59.504	ENSSMAG00000000218	ptcd1	84	60.656	Scophthalmus_maximus
ENSPCAG00000001852	-	85	58.779	ENSSDUG00000015671	ptcd1	78	58.779	Seriola_dumerili
ENSPCAG00000001852	-	83	58.915	ENSSLDG00000014261	ptcd1	76	58.915	Seriola_lalandi_dorsalis
ENSPCAG00000001852	-	84	59.167	ENSSPUG00000003540	-	78	57.971	Sphenodon_punctatus
ENSPCAG00000001852	-	82	55.639	ENSSPAG00000011049	ptcd1	71	55.639	Stegastes_partitus
ENSPCAG00000001852	-	89	78.873	ENSSSCG00000007622	-	86	78.873	Sus_scrofa
ENSPCAG00000001852	-	84	60.833	ENSTGUG00000007563	-	88	62.500	Taeniopygia_guttata
ENSPCAG00000001852	-	83	54.676	ENSTRUG00000013471	ptcd1	72	54.676	Takifugu_rubripes
ENSPCAG00000001852	-	81	52.800	ENSTNIG00000008271	ptcd1	74	52.800	Tetraodon_nigroviridis
ENSPCAG00000001852	-	89	78.169	ENSTBEG00000011021	-	82	78.169	Tupaia_belangeri
ENSPCAG00000001852	-	89	80.142	ENSTTRG00000003006	-	81	80.142	Tursiops_truncatus
ENSPCAG00000001852	-	89	80.986	ENSUAMG00000008049	-	81	80.986	Ursus_americanus
ENSPCAG00000001852	-	89	80.282	ENSVVUG00000008836	-	81	80.282	Vulpes_vulpes
ENSPCAG00000001852	-	81	59.829	ENSXETG00000009891	ptcd1	77	59.829	Xenopus_tropicalis
ENSPCAG00000001852	-	81	60.976	ENSXMAG00000015540	ptcd1	72	60.976	Xiphophorus_maculatus