EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000001979 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 98663 bases
Position: chrGeneScaffold_3221:1368-100030
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	1	7
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	2	7
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	3	7
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	4	7
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	5	7
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	6	7
ENSPCAP00000001890	PUF	PF00806.19	8.2e-63	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002008	PUM1-201	3672	-	ENSPCAP00000001890	1223 (aa)	-	UPI00018AF5E7

Gene Model

Click here to download ENSPCAG00000001979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000001979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000001979	PUM1	76	99.383	ENSG00000134644	PUM1	100	98.958	Homo_sapiens
ENSPCAG00000001979	PUM1	73	93.519	ENSAPOG00000021632	pum1	80	92.901	Acanthochromis_polyacanthus
ENSPCAG00000001979	PUM1	76	99.691	ENSAMEG00000017656	PUM1	77	99.691	Ailuropoda_melanoleuca
ENSPCAG00000001979	PUM1	73	92.901	ENSACIG00000021013	pum1	76	92.901	Amphilophus_citrinellus
ENSPCAG00000001979	PUM1	73	93.519	ENSAOCG00000003944	pum1	81	92.901	Amphiprion_ocellaris
ENSPCAG00000001979	PUM1	73	93.519	ENSAPEG00000014550	pum1	81	92.901	Amphiprion_percula
ENSPCAG00000001979	PUM1	73	93.519	ENSATEG00000016004	pum1	81	92.901	Anabas_testudineus
ENSPCAG00000001979	PUM1	74	98.765	ENSAPLG00000009351	PUM1	78	98.765	Anas_platyrhynchos
ENSPCAG00000001979	PUM1	74	99.074	ENSACAG00000000682	PUM1	76	99.074	Anolis_carolinensis
ENSPCAG00000001979	PUM1	76	98.765	ENSANAG00000027865	PUM1	85	98.765	Aotus_nancymaae
ENSPCAG00000001979	PUM1	64	93.210	ENSACLG00000019354	pum1	75	93.210	Astatotilapia_calliptera
ENSPCAG00000001979	PUM1	74	93.210	ENSAMXG00000020607	pum1	74	93.210	Astyanax_mexicanus
ENSPCAG00000001979	PUM1	74	99.691	ENSBTAG00000018979	PUM1	84	99.691	Bos_taurus
ENSPCAG00000001979	PUM1	76	98.765	ENSCJAG00000006035	PUM1	85	98.765	Callithrix_jacchus
ENSPCAG00000001979	PUM1	74	99.691	ENSCAFG00000011205	PUM1	76	99.691	Canis_familiaris
ENSPCAG00000001979	PUM1	64	99.691	ENSCAFG00020024616	PUM1	80	99.691	Canis_lupus_dingo
ENSPCAG00000001979	PUM1	74	99.174	ENSCHIG00000012952	PUM1	84	99.174	Capra_hircus
ENSPCAG00000001979	PUM1	74	99.383	ENSTSYG00000008868	PUM1	83	98.347	Carlito_syrichta
ENSPCAG00000001979	PUM1	74	98.765	ENSCPOG00000031613	PUM1	84	98.765	Cavia_porcellus
ENSPCAG00000001979	PUM1	74	99.383	ENSCATG00000017991	PUM1	84	99.383	Cercocebus_atys
ENSPCAG00000001979	PUM1	74	98.765	ENSCLAG00000007662	PUM1	84	98.765	Chinchilla_lanigera
ENSPCAG00000001979	PUM1	74	99.383	ENSCSAG00000001028	PUM1	77	99.383	Chlorocebus_sabaeus
ENSPCAG00000001979	PUM1	74	98.387	ENSCHOG00000010245	PUM1	76	98.387	Choloepus_hoffmanni
ENSPCAG00000001979	PUM1	75	98.765	ENSCPBG00000009288	PUM1	84	98.765	Chrysemys_picta_bellii
ENSPCAG00000001979	PUM1	76	99.383	ENSCANG00000042606	PUM1	85	98.765	Colobus_angolensis_palliatus
ENSPCAG00000001979	PUM1	74	98.765	ENSCGRG00001024949	Pum1	84	98.765	Cricetulus_griseus_chok1gshd
ENSPCAG00000001979	PUM1	74	98.765	ENSCGRG00000014197	Pum1	84	98.765	Cricetulus_griseus_crigri
ENSPCAG00000001979	PUM1	64	92.901	ENSCSEG00000015981	pum1	75	92.901	Cynoglossus_semilaevis
ENSPCAG00000001979	PUM1	73	92.901	ENSCVAG00000007043	pum1	76	92.901	Cyprinodon_variegatus
ENSPCAG00000001979	PUM1	74	93.519	ENSDARG00000099256	pum1	77	93.519	Danio_rerio
ENSPCAG00000001979	PUM1	74	99.174	ENSDNOG00000010939	PUM1	78	99.174	Dasypus_novemcinctus
ENSPCAG00000001979	PUM1	64	98.148	ENSDORG00000001875	Pum1	81	98.148	Dipodomys_ordii
ENSPCAG00000001979	PUM1	65	98.681	ENSETEG00000004355	PUM1	64	98.681	Echinops_telfairi
ENSPCAG00000001979	PUM1	74	99.691	ENSEASG00005010813	PUM1	77	99.691	Equus_asinus_asinus
ENSPCAG00000001979	PUM1	74	99.691	ENSECAG00000021369	PUM1	77	99.691	Equus_caballus
ENSPCAG00000001979	PUM1	57	100.000	ENSEEUG00000003871	PUM1	59	100.000	Erinaceus_europaeus
ENSPCAG00000001979	PUM1	73	92.901	ENSELUG00000002409	pum1	81	92.284	Esox_lucius
ENSPCAG00000001979	PUM1	74	99.691	ENSFCAG00000010374	PUM1	84	99.691	Felis_catus
ENSPCAG00000001979	PUM1	75	99.074	ENSFALG00000001214	PUM1	75	99.074	Ficedula_albicollis
ENSPCAG00000001979	PUM1	74	98.765	ENSFDAG00000011319	PUM1	84	98.765	Fukomys_damarensis
ENSPCAG00000001979	PUM1	65	92.901	ENSGMOG00000010491	pum1	76	92.901	Gadus_morhua
ENSPCAG00000001979	PUM1	74	99.074	ENSGALG00000042598	PUM1	84	99.074	Gallus_gallus
ENSPCAG00000001979	PUM1	73	92.593	ENSGAFG00000015617	pum1	81	91.975	Gambusia_affinis
ENSPCAG00000001979	PUM1	74	93.210	ENSGACG00000005717	pum1	77	93.210	Gasterosteus_aculeatus
ENSPCAG00000001979	PUM1	74	98.765	ENSGAGG00000001290	PUM1	78	98.765	Gopherus_agassizii
ENSPCAG00000001979	PUM1	74	99.383	ENSGGOG00000011983	PUM1	84	99.383	Gorilla_gorilla
ENSPCAG00000001979	PUM1	73	93.210	ENSHBUG00000018718	pum1	76	93.210	Haplochromis_burtoni
ENSPCAG00000001979	PUM1	74	98.462	ENSHGLG00000013819	Pum1	84	98.462	Heterocephalus_glaber_female
ENSPCAG00000001979	PUM1	74	98.462	ENSHGLG00100008621	Pum1	84	98.462	Heterocephalus_glaber_male
ENSPCAG00000001979	PUM1	64	93.210	ENSHCOG00000005149	pum1	76	93.210	Hippocampus_comes
ENSPCAG00000001979	PUM1	74	92.593	ENSIPUG00000020421	pum1	76	92.593	Ictalurus_punctatus
ENSPCAG00000001979	PUM1	74	99.174	ENSSTOG00000010757	PUM1	84	99.174	Ictidomys_tridecemlineatus
ENSPCAG00000001979	PUM1	74	99.174	ENSJJAG00000000530	Pum1	84	99.174	Jaculus_jaculus
ENSPCAG00000001979	PUM1	73	92.593	ENSKMAG00000003481	pum1	76	92.593	Kryptolebias_marmoratus
ENSPCAG00000001979	PUM1	73	93.519	ENSLBEG00000002527	pum1	76	93.519	Labrus_bergylta
ENSPCAG00000001979	PUM1	74	86.652	ENSLACG00000017188	PUM1	75	86.652	Latimeria_chalumnae
ENSPCAG00000001979	PUM1	74	96.605	ENSLOCG00000005210	pum1	77	96.605	Lepisosteus_oculatus
ENSPCAG00000001979	PUM1	74	100.000	ENSLAFG00000003178	PUM1	77	100.000	Loxodonta_africana
ENSPCAG00000001979	PUM1	74	99.383	ENSMFAG00000010291	PUM1	84	99.383	Macaca_fascicularis
ENSPCAG00000001979	PUM1	74	99.383	ENSMMUG00000013520	PUM1	84	99.383	Macaca_mulatta
ENSPCAG00000001979	PUM1	74	99.383	ENSMNEG00000034639	PUM1	84	99.383	Macaca_nemestrina
ENSPCAG00000001979	PUM1	76	99.383	ENSMLEG00000038743	PUM1	85	98.765	Mandrillus_leucophaeus
ENSPCAG00000001979	PUM1	73	93.210	ENSMAMG00000011606	pum1	76	93.210	Mastacembelus_armatus
ENSPCAG00000001979	PUM1	73	93.210	ENSMZEG00005005834	pum1	76	93.210	Maylandia_zebra
ENSPCAG00000001979	PUM1	74	99.074	ENSMGAG00000000724	PUM1	84	99.074	Meleagris_gallopavo
ENSPCAG00000001979	PUM1	74	98.765	ENSMAUG00000022090	Pum1	84	98.765	Mesocricetus_auratus
ENSPCAG00000001979	PUM1	74	99.074	ENSMICG00000007713	-	84	99.074	Microcebus_murinus
ENSPCAG00000001979	PUM1	75	97.149	ENSMICG00000012213	-	83	96.909	Microcebus_murinus
ENSPCAG00000001979	PUM1	74	98.457	ENSMOCG00000015463	Pum1	84	98.457	Microtus_ochrogaster
ENSPCAG00000001979	PUM1	59	92.593	ENSMMOG00000019817	pum1	78	92.593	Mola_mola
ENSPCAG00000001979	PUM1	74	99.074	ENSMODG00000017067	PUM1	78	99.074	Monodelphis_domestica
ENSPCAG00000001979	PUM1	64	92.901	ENSMALG00000016399	pum1	81	92.901	Monopterus_albus
ENSPCAG00000001979	PUM1	74	98.457	MGP_CAROLIEiJ_G0026549	Pum1	84	98.457	Mus_caroli
ENSPCAG00000001979	PUM1	74	98.765	ENSMUSG00000028580	Pum1	84	98.765	Mus_musculus
ENSPCAG00000001979	PUM1	74	98.765	MGP_PahariEiJ_G0028881	Pum1	84	98.765	Mus_pahari
ENSPCAG00000001979	PUM1	74	98.765	MGP_SPRETEiJ_G0027529	Pum1	84	98.765	Mus_spretus
ENSPCAG00000001979	PUM1	74	99.174	ENSMPUG00000015454	PUM1	78	99.174	Mustela_putorius_furo
ENSPCAG00000001979	PUM1	74	99.174	ENSMLUG00000006490	PUM1	78	99.174	Myotis_lucifugus
ENSPCAG00000001979	PUM1	74	98.765	ENSNGAG00000002378	Pum1	84	98.765	Nannospalax_galili
ENSPCAG00000001979	PUM1	61	92.593	ENSNBRG00000010689	pum1	81	92.593	Neolamprologus_brichardi
ENSPCAG00000001979	PUM1	76	98.718	ENSNLEG00000001151	PUM1	85	98.246	Nomascus_leucogenys
ENSPCAG00000001979	PUM1	53	100.000	ENSMEUG00000000976	-	55	100.000	Notamacropus_eugenii
ENSPCAG00000001979	PUM1	58	99.065	ENSOPRG00000001776	PUM1	50	99.065	Ochotona_princeps
ENSPCAG00000001979	PUM1	74	98.765	ENSODEG00000003465	PUM1	84	98.765	Octodon_degus
ENSPCAG00000001979	PUM1	74	93.210	ENSONIG00000002290	pum1	76	93.210	Oreochromis_niloticus
ENSPCAG00000001979	PUM1	60	96.644	ENSOANG00000004902	-	63	96.644	Ornithorhynchus_anatinus
ENSPCAG00000001979	PUM1	74	99.174	ENSOCUG00000008641	PUM1	77	99.174	Oryctolagus_cuniculus
ENSPCAG00000001979	PUM1	73	93.210	ENSORLG00000011482	pum1	76	93.210	Oryzias_latipes
ENSPCAG00000001979	PUM1	73	93.210	ENSORLG00020019461	pum1	76	93.210	Oryzias_latipes_hni
ENSPCAG00000001979	PUM1	73	93.210	ENSORLG00015011375	pum1	76	93.210	Oryzias_latipes_hsok
ENSPCAG00000001979	PUM1	64	92.284	ENSOMEG00000009312	pum1	81	92.284	Oryzias_melastigma
ENSPCAG00000001979	PUM1	74	98.347	ENSOGAG00000011063	PUM1	77	98.347	Otolemur_garnettii
ENSPCAG00000001979	PUM1	74	99.691	ENSOARG00000001899	PUM1	83	99.174	Ovis_aries
ENSPCAG00000001979	PUM1	74	99.383	ENSPPAG00000044003	PUM1	84	99.383	Pan_paniscus
ENSPCAG00000001979	PUM1	76	99.691	ENSPPRG00000001370	PUM1	85	99.074	Panthera_pardus
ENSPCAG00000001979	PUM1	76	99.691	ENSPTIG00000010798	PUM1	85	99.074	Panthera_tigris_altaica
ENSPCAG00000001979	PUM1	74	99.383	ENSPTRG00000000453	PUM1	84	99.383	Pan_troglodytes
ENSPCAG00000001979	PUM1	76	98.765	ENSPANG00000016338	PUM1	85	98.765	Papio_anubis
ENSPCAG00000001979	PUM1	74	93.519	ENSPKIG00000010578	pum1	83	92.901	Paramormyrops_kingsleyae
ENSPCAG00000001979	PUM1	75	98.148	ENSPSIG00000014118	PUM1	85	98.148	Pelodiscus_sinensis
ENSPCAG00000001979	PUM1	61	93.210	ENSPMGG00000005836	pum1	80	93.210	Periophthalmus_magnuspinnatus
ENSPCAG00000001979	PUM1	74	98.765	ENSPEMG00000010009	Pum1	84	98.765	Peromyscus_maniculatus_bairdii
ENSPCAG00000001979	PUM1	74	99.074	ENSPCIG00000014151	PUM1	84	99.074	Phascolarctos_cinereus
ENSPCAG00000001979	PUM1	68	92.593	ENSPFOG00000007289	pum1	77	92.593	Poecilia_formosa
ENSPCAG00000001979	PUM1	73	92.593	ENSPLAG00000007256	pum1	83	92.593	Poecilia_latipinna
ENSPCAG00000001979	PUM1	64	92.593	ENSPMEG00000019543	pum1	73	92.593	Poecilia_mexicana
ENSPCAG00000001979	PUM1	73	92.593	ENSPREG00000005195	pum1	81	91.975	Poecilia_reticulata
ENSPCAG00000001979	PUM1	74	99.383	ENSPPYG00000001621	PUM1	77	99.383	Pongo_abelii
ENSPCAG00000001979	PUM1	74	99.074	ENSPCOG00000004398	PUM1	84	99.074	Propithecus_coquereli
ENSPCAG00000001979	PUM1	76	98.242	ENSPVAG00000005207	PUM1	77	98.242	Pteropus_vampyrus
ENSPCAG00000001979	PUM1	73	93.210	ENSPNYG00000009518	pum1	76	93.210	Pundamilia_nyererei
ENSPCAG00000001979	PUM1	74	93.519	ENSPNAG00000026728	pum1	84	93.519	Pygocentrus_nattereri
ENSPCAG00000001979	PUM1	74	98.347	ENSRNOG00000011709	Pum1	78	98.347	Rattus_norvegicus
ENSPCAG00000001979	PUM1	76	99.383	ENSRBIG00000042521	PUM1	84	99.383	Rhinopithecus_bieti
ENSPCAG00000001979	PUM1	76	99.383	ENSRROG00000020156	PUM1	85	98.765	Rhinopithecus_roxellana
ENSPCAG00000001979	PUM1	74	99.383	ENSSBOG00000032037	PUM1	84	99.383	Saimiri_boliviensis_boliviensis
ENSPCAG00000001979	PUM1	74	99.074	ENSSHAG00000010918	PUM1	78	99.074	Sarcophilus_harrisii
ENSPCAG00000001979	PUM1	73	93.519	ENSSMAG00000010918	pum1	81	92.901	Scophthalmus_maximus
ENSPCAG00000001979	PUM1	73	93.519	ENSSDUG00000009021	pum1	76	93.519	Seriola_dumerili
ENSPCAG00000001979	PUM1	73	93.519	ENSSLDG00000009667	pum1	83	93.519	Seriola_lalandi_dorsalis
ENSPCAG00000001979	PUM1	72	99.383	ENSSARG00000003055	PUM1	72	99.383	Sorex_araneus
ENSPCAG00000001979	PUM1	74	99.074	ENSSPUG00000006267	PUM1	78	99.074	Sphenodon_punctatus
ENSPCAG00000001979	PUM1	73	93.519	ENSSPAG00000016636	pum1	81	92.901	Stegastes_partitus
ENSPCAG00000001979	PUM1	74	99.691	ENSSSCG00000003591	PUM1	84	99.691	Sus_scrofa
ENSPCAG00000001979	PUM1	73	93.519	ENSTRUG00000013121	pum1	81	92.901	Takifugu_rubripes
ENSPCAG00000001979	PUM1	74	93.231	ENSTNIG00000016983	pum1	76	93.231	Tetraodon_nigroviridis
ENSPCAG00000001979	PUM1	60	99.194	ENSTBEG00000013810	PUM1	63	99.174	Tupaia_belangeri
ENSPCAG00000001979	PUM1	68	100.000	ENSTTRG00000007436	PUM1	66	100.000	Tursiops_truncatus
ENSPCAG00000001979	PUM1	72	99.174	ENSUAMG00000018262	-	75	99.174	Ursus_americanus
ENSPCAG00000001979	PUM1	74	99.691	ENSUMAG00000009211	PUM1	90	99.691	Ursus_maritimus
ENSPCAG00000001979	PUM1	66	100.000	ENSVPAG00000005902	PUM1	69	100.000	Vicugna_pacos
ENSPCAG00000001979	PUM1	74	99.691	ENSVVUG00000014631	PUM1	84	99.691	Vulpes_vulpes
ENSPCAG00000001979	PUM1	74	87.037	ENSXETG00000012904	pum1	77	87.037	Xenopus_tropicalis
ENSPCAG00000001979	PUM1	73	92.593	ENSXMAG00000002945	pum1	83	92.593	Xiphophorus_maculatus