EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002093 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 8165 bases
Position: chrGeneScaffold_6323:51765-59929
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000001959	tRNA_int_end_N2	PF12928.7	6.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002082	TSEN54-201	1503	-	ENSPCAP00000001959	501 (aa)	-	UPI00018AF798

Gene Model

Click here to download ENSPCAG00000002093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002093	TSEN54	99	69.261	ENSG00000182173	TSEN54	100	90.278	Homo_sapiens
ENSPCAG00000002093	TSEN54	72	61.146	ENSAPOG00000009659	tsen54	68	66.667	Acanthochromis_polyacanthus
ENSPCAG00000002093	TSEN54	97	73.279	ENSAMEG00000009414	TSEN54	93	73.279	Ailuropoda_melanoleuca
ENSPCAG00000002093	TSEN54	96	42.623	ENSAOCG00000000152	tsen54	90	42.213	Amphiprion_ocellaris
ENSPCAG00000002093	TSEN54	96	42.008	ENSAPEG00000018931	tsen54	90	41.803	Amphiprion_percula
ENSPCAG00000002093	TSEN54	74	59.355	ENSATEG00000019860	tsen54	92	39.357	Anabas_testudineus
ENSPCAG00000002093	TSEN54	85	45.909	ENSAPLG00000009419	TSEN54	94	45.909	Anas_platyrhynchos
ENSPCAG00000002093	TSEN54	73	72.050	ENSACAG00000006714	TSEN54	94	47.887	Anolis_carolinensis
ENSPCAG00000002093	TSEN54	98	70.528	ENSANAG00000024061	TSEN54	94	71.485	Aotus_nancymaae
ENSPCAG00000002093	TSEN54	96	41.152	ENSACLG00000019800	tsen54	92	41.152	Astatotilapia_calliptera
ENSPCAG00000002093	TSEN54	96	41.837	ENSAMXG00000006546	tsen54	92	41.141	Astyanax_mexicanus
ENSPCAG00000002093	TSEN54	99	72.332	ENSBTAG00000000824	TSEN54	95	72.332	Bos_taurus
ENSPCAG00000002093	TSEN54	98	70.122	ENSCJAG00000014278	TSEN54	94	70.693	Callithrix_jacchus
ENSPCAG00000002093	TSEN54	99	72.925	ENSCAFG00000004798	TSEN54	95	72.925	Canis_familiaris
ENSPCAG00000002093	TSEN54	99	72.925	ENSCAFG00020000312	TSEN54	95	72.925	Canis_lupus_dingo
ENSPCAG00000002093	TSEN54	99	70.949	ENSCHIG00000019908	TSEN54	95	70.949	Capra_hircus
ENSPCAG00000002093	TSEN54	85	67.972	ENSTSYG00000037439	TSEN54	94	67.972	Carlito_syrichta
ENSPCAG00000002093	TSEN54	98	70.122	ENSCCAG00000036624	TSEN54	94	71.089	Cebus_capucinus
ENSPCAG00000002093	TSEN54	97	70.431	ENSCATG00000042877	TSEN54	94	71.683	Cercocebus_atys
ENSPCAG00000002093	TSEN54	97	68.876	ENSCLAG00000002924	TSEN54	95	68.102	Chinchilla_lanigera
ENSPCAG00000002093	TSEN54	99	69.261	ENSCSAG00000004809	TSEN54	95	71.146	Chlorocebus_sabaeus
ENSPCAG00000002093	TSEN54	97	49.899	ENSCPBG00000028071	TSEN54	94	49.899	Chrysemys_picta_bellii
ENSPCAG00000002093	TSEN54	65	36.923	ENSCING00000018281	-	56	36.923	Ciona_intestinalis
ENSPCAG00000002093	TSEN54	99	69.261	ENSCANG00000028053	TSEN54	95	71.146	Colobus_angolensis_palliatus
ENSPCAG00000002093	TSEN54	99	67.525	ENSCGRG00001020029	Tsen54	95	67.525	Cricetulus_griseus_chok1gshd
ENSPCAG00000002093	TSEN54	83	64.692	ENSCGRG00000016289	Tsen54	94	64.692	Cricetulus_griseus_crigri
ENSPCAG00000002093	TSEN54	79	35.680	ENSCSEG00000020586	tsen54	94	34.878	Cynoglossus_semilaevis
ENSPCAG00000002093	TSEN54	55	69.444	ENSDARG00000036844	tsen54	72	69.444	Danio_rerio
ENSPCAG00000002093	TSEN54	99	71.937	ENSDNOG00000018452	TSEN54	95	71.937	Dasypus_novemcinctus
ENSPCAG00000002093	TSEN54	99	70.158	ENSDORG00000004073	Tsen54	95	70.158	Dipodomys_ordii
ENSPCAG00000002093	TSEN54	68	55.862	ENSEBUG00000005203	TSEN54	62	55.862	Eptatretus_burgeri
ENSPCAG00000002093	TSEN54	99	72.332	ENSEASG00005000579	TSEN54	95	72.332	Equus_asinus_asinus
ENSPCAG00000002093	TSEN54	99	72.134	ENSECAG00000004924	TSEN54	95	72.134	Equus_caballus
ENSPCAG00000002093	TSEN54	85	67.586	ENSEEUG00000008467	TSEN54	95	67.586	Erinaceus_europaeus
ENSPCAG00000002093	TSEN54	74	59.375	ENSELUG00000017703	tsen54	65	59.375	Esox_lucius
ENSPCAG00000002093	TSEN54	99	73.715	ENSFCAG00000023712	TSEN54	95	73.715	Felis_catus
ENSPCAG00000002093	TSEN54	93	45.684	ENSFALG00000001119	TSEN54	89	45.684	Ficedula_albicollis
ENSPCAG00000002093	TSEN54	85	67.824	ENSFDAG00000019090	TSEN54	94	68.056	Fukomys_damarensis
ENSPCAG00000002093	TSEN54	96	42.443	ENSFHEG00000005470	tsen54	92	42.443	Fundulus_heteroclitus
ENSPCAG00000002093	TSEN54	70	47.407	ENSGMOG00000013146	tsen54	86	47.407	Gadus_morhua
ENSPCAG00000002093	TSEN54	93	43.033	ENSGALG00000047163	TSEN54	92	43.061	Gallus_gallus
ENSPCAG00000002093	TSEN54	96	42.029	ENSGAFG00000005111	tsen54	92	42.029	Gambusia_affinis
ENSPCAG00000002093	TSEN54	76	58.571	ENSGACG00000014987	tsen54	84	56.849	Gasterosteus_aculeatus
ENSPCAG00000002093	TSEN54	97	49.600	ENSGAGG00000006825	TSEN54	93	49.800	Gopherus_agassizii
ENSPCAG00000002093	TSEN54	96	69.917	ENSGGOG00000009417	TSEN54	95	71.869	Gorilla_gorilla
ENSPCAG00000002093	TSEN54	91	39.746	ENSHBUG00000018296	tsen54	88	39.746	Haplochromis_burtoni
ENSPCAG00000002093	TSEN54	99	69.565	ENSHGLG00000007979	TSEN54	95	69.565	Heterocephalus_glaber_female
ENSPCAG00000002093	TSEN54	99	68.577	ENSHGLG00100005497	TSEN54	95	68.577	Heterocephalus_glaber_male
ENSPCAG00000002093	TSEN54	55	64.286	ENSHCOG00000007481	tsen54	59	64.286	Hippocampus_comes
ENSPCAG00000002093	TSEN54	71	61.935	ENSIPUG00000000590	tsen54	71	61.935	Ictalurus_punctatus
ENSPCAG00000002093	TSEN54	99	67.723	ENSSTOG00000012883	TSEN54	95	67.723	Ictidomys_tridecemlineatus
ENSPCAG00000002093	TSEN54	99	69.094	ENSJJAG00000007365	Tsen54	95	69.094	Jaculus_jaculus
ENSPCAG00000002093	TSEN54	96	42.770	ENSKMAG00000006944	tsen54	92	42.159	Kryptolebias_marmoratus
ENSPCAG00000002093	TSEN54	73	61.146	ENSLBEG00000004199	tsen54	70	61.146	Labrus_bergylta
ENSPCAG00000002093	TSEN54	95	40.467	ENSLACG00000009497	TSEN54	70	65.132	Latimeria_chalumnae
ENSPCAG00000002093	TSEN54	72	66.242	ENSLOCG00000011191	tsen54	68	66.242	Lepisosteus_oculatus
ENSPCAG00000002093	TSEN54	99	74.800	ENSLAFG00000011655	TSEN54	95	74.800	Loxodonta_africana
ENSPCAG00000002093	TSEN54	99	69.461	ENSMFAG00000000712	TSEN54	95	71.344	Macaca_fascicularis
ENSPCAG00000002093	TSEN54	99	69.261	ENSMNEG00000029199	TSEN54	95	71.146	Macaca_nemestrina
ENSPCAG00000002093	TSEN54	85	68.150	ENSMLEG00000044168	TSEN54	83	70.370	Mandrillus_leucophaeus
ENSPCAG00000002093	TSEN54	75	58.235	ENSMAMG00000019773	tsen54	95	39.489	Mastacembelus_armatus
ENSPCAG00000002093	TSEN54	96	41.358	ENSMZEG00005000884	tsen54	92	41.358	Maylandia_zebra
ENSPCAG00000002093	TSEN54	74	63.087	ENSMGAG00000009556	TSEN54	70	63.087	Meleagris_gallopavo
ENSPCAG00000002093	TSEN54	99	69.109	ENSMAUG00000016838	Tsen54	95	69.109	Mesocricetus_auratus
ENSPCAG00000002093	TSEN54	99	72.056	ENSMICG00000044012	TSEN54	95	72.056	Microcebus_murinus
ENSPCAG00000002093	TSEN54	99	69.109	ENSMOCG00000021585	Tsen54	95	69.109	Microtus_ochrogaster
ENSPCAG00000002093	TSEN54	72	63.158	ENSMMOG00000020189	tsen54	80	63.158	Mola_mola
ENSPCAG00000002093	TSEN54	98	62.178	ENSMODG00000007438	TSEN54	93	61.598	Monodelphis_domestica
ENSPCAG00000002093	TSEN54	96	39.806	ENSMALG00000020573	tsen54	92	38.986	Monopterus_albus
ENSPCAG00000002093	TSEN54	99	67.391	MGP_CAROLIEiJ_G0017417	Tsen54	95	67.391	Mus_caroli
ENSPCAG00000002093	TSEN54	99	67.984	ENSMUSG00000020781	Tsen54	95	67.984	Mus_musculus
ENSPCAG00000002093	TSEN54	99	67.589	MGP_PahariEiJ_G0018547	Tsen54	95	67.589	Mus_pahari
ENSPCAG00000002093	TSEN54	99	67.787	MGP_SPRETEiJ_G0018262	Tsen54	95	67.787	Mus_spretus
ENSPCAG00000002093	TSEN54	99	71.739	ENSMPUG00000013870	TSEN54	95	71.739	Mustela_putorius_furo
ENSPCAG00000002093	TSEN54	99	70.717	ENSMLUG00000015298	TSEN54	95	70.717	Myotis_lucifugus
ENSPCAG00000002093	TSEN54	99	69.428	ENSNGAG00000015673	Tsen54	95	69.428	Nannospalax_galili
ENSPCAG00000002093	TSEN54	88	57.269	ENSMEUG00000011908	TSEN54	95	57.269	Notamacropus_eugenii
ENSPCAG00000002093	TSEN54	99	64.683	ENSOPRG00000012513	TSEN54	95	64.683	Ochotona_princeps
ENSPCAG00000002093	TSEN54	96	41.358	ENSONIG00000009543	tsen54	92	41.152	Oreochromis_niloticus
ENSPCAG00000002093	TSEN54	99	64.008	ENSOCUG00000009875	TSEN54	95	64.008	Oryctolagus_cuniculus
ENSPCAG00000002093	TSEN54	96	42.474	ENSORLG00000000852	tsen54	92	41.649	Oryzias_latipes
ENSPCAG00000002093	TSEN54	96	41.564	ENSORLG00020018221	tsen54	92	41.408	Oryzias_latipes_hni
ENSPCAG00000002093	TSEN54	96	40.984	ENSORLG00015009413	tsen54	93	40.741	Oryzias_latipes_hsok
ENSPCAG00000002093	TSEN54	96	41.237	ENSOMEG00000014402	tsen54	89	40.412	Oryzias_melastigma
ENSPCAG00000002093	TSEN54	99	67.391	ENSOGAG00000001442	TSEN54	95	67.391	Otolemur_garnettii
ENSPCAG00000002093	TSEN54	85	69.444	ENSOARG00000010361	TSEN54	94	69.444	Ovis_aries
ENSPCAG00000002093	TSEN54	94	69.427	ENSPPAG00000043519	TSEN54	95	71.429	Pan_paniscus
ENSPCAG00000002093	TSEN54	99	74.308	ENSPPRG00000009162	TSEN54	95	74.308	Panthera_pardus
ENSPCAG00000002093	TSEN54	85	71.991	ENSPTIG00000019312	TSEN54	91	71.991	Panthera_tigris_altaica
ENSPCAG00000002093	TSEN54	99	69.461	ENSPTRG00000009646	TSEN54	95	71.344	Pan_troglodytes
ENSPCAG00000002093	TSEN54	98	70.325	ENSPANG00000020133	TSEN54	93	72.233	Papio_anubis
ENSPCAG00000002093	TSEN54	96	39.652	ENSPKIG00000023018	tsen54	94	38.366	Paramormyrops_kingsleyae
ENSPCAG00000002093	TSEN54	79	45.455	ENSPSIG00000012807	TSEN54	94	45.455	Pelodiscus_sinensis
ENSPCAG00000002093	TSEN54	92	33.974	ENSPMGG00000019578	tsen54	94	33.475	Periophthalmus_magnuspinnatus
ENSPCAG00000002093	TSEN54	99	68.911	ENSPEMG00000014857	Tsen54	95	69.109	Peromyscus_maniculatus_bairdii
ENSPCAG00000002093	TSEN54	96	41.770	ENSPFOG00000022740	tsen54	92	41.770	Poecilia_formosa
ENSPCAG00000002093	TSEN54	96	42.029	ENSPLAG00000014847	tsen54	92	42.029	Poecilia_latipinna
ENSPCAG00000002093	TSEN54	96	41.822	ENSPMEG00000022876	tsen54	92	41.822	Poecilia_mexicana
ENSPCAG00000002093	TSEN54	96	41.408	ENSPREG00000013090	tsen54	92	41.201	Poecilia_reticulata
ENSPCAG00000002093	TSEN54	65	88.889	ENSPPYG00000008629	TSEN54	94	67.105	Pongo_abelii
ENSPCAG00000002093	TSEN54	99	73.320	ENSPCOG00000027880	TSEN54	95	73.320	Propithecus_coquereli
ENSPCAG00000002093	TSEN54	99	72.925	ENSPVAG00000008446	TSEN54	95	72.925	Pteropus_vampyrus
ENSPCAG00000002093	TSEN54	92	41.164	ENSPNYG00000010217	tsen54	94	41.164	Pundamilia_nyererei
ENSPCAG00000002093	TSEN54	97	41.260	ENSPNAG00000003770	tsen54	92	41.667	Pygocentrus_nattereri
ENSPCAG00000002093	TSEN54	99	67.787	ENSRNOG00000004598	Tsen54	95	67.787	Rattus_norvegicus
ENSPCAG00000002093	TSEN54	99	69.461	ENSRBIG00000043040	TSEN54	95	71.344	Rhinopithecus_bieti
ENSPCAG00000002093	TSEN54	99	69.661	ENSRROG00000030797	TSEN54	95	71.542	Rhinopithecus_roxellana
ENSPCAG00000002093	TSEN54	99	66.335	ENSSBOG00000013543	TSEN54	94	67.850	Saimiri_boliviensis_boliviensis
ENSPCAG00000002093	TSEN54	98	60.198	ENSSHAG00000018127	TSEN54	93	60.198	Sarcophilus_harrisii
ENSPCAG00000002093	TSEN54	79	38.741	ENSSFOG00015004093	tsen54	94	38.741	Scleropages_formosus
ENSPCAG00000002093	TSEN54	74	65.333	ENSSMAG00000012449	tsen54	65	71.429	Scophthalmus_maximus
ENSPCAG00000002093	TSEN54	75	60.510	ENSSDUG00000021506	tsen54	72	60.510	Seriola_dumerili
ENSPCAG00000002093	TSEN54	75	59.873	ENSSLDG00000016303	tsen54	72	59.873	Seriola_lalandi_dorsalis
ENSPCAG00000002093	TSEN54	60	70.968	ENSSPUG00000008988	TSEN54	68	70.701	Sphenodon_punctatus
ENSPCAG00000002093	TSEN54	68	61.481	ENSSPAG00000008098	-	73	61.481	Stegastes_partitus
ENSPCAG00000002093	TSEN54	55	62.500	ENSSPAG00000008047	tsen54	71	62.500	Stegastes_partitus
ENSPCAG00000002093	TSEN54	99	73.913	ENSSSCG00000036852	TSEN54	95	73.913	Sus_scrofa
ENSPCAG00000002093	TSEN54	63	68.687	ENSTGUG00000008548	TSEN54	70	68.687	Taeniopygia_guttata
ENSPCAG00000002093	TSEN54	96	42.127	ENSTRUG00000004230	tsen54	92	41.633	Takifugu_rubripes
ENSPCAG00000002093	TSEN54	71	65.132	ENSTNIG00000011281	tsen54	70	65.132	Tetraodon_nigroviridis
ENSPCAG00000002093	TSEN54	85	71.363	ENSTTRG00000015828	TSEN54	95	71.363	Tursiops_truncatus
ENSPCAG00000002093	TSEN54	79	70.370	ENSUAMG00000010045	TSEN54	94	70.370	Ursus_americanus
ENSPCAG00000002093	TSEN54	82	71.429	ENSUMAG00000008979	TSEN54	94	71.429	Ursus_maritimus
ENSPCAG00000002093	TSEN54	96	73.306	ENSVVUG00000011411	TSEN54	93	73.306	Vulpes_vulpes
ENSPCAG00000002093	TSEN54	97	44.177	ENSXETG00000012532	tsen54	89	68.333	Xenopus_tropicalis
ENSPCAG00000002093	TSEN54	95	40.748	ENSXCOG00000018245	tsen54	93	40.417	Xiphophorus_couchianus
ENSPCAG00000002093	TSEN54	96	41.822	ENSXMAG00000018818	tsen54	92	41.615	Xiphophorus_maculatus