EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002258 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 2530 bases
Position: chrGeneScaffold_1398:23361-25890
Accession: 14173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002112	PseudoU_synth_2	PF00849.22	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002246	RPUSD1-201	903	-	ENSPCAP00000002112	300 (aa)	-	UPI00018ADD8F

Gene Model

Click here to download ENSPCAG00000002258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002258	RPUSD1	100	67.628	ENSG00000007376	RPUSD1	100	73.224	Homo_sapiens
ENSPCAG00000002258	RPUSD1	98	43.709	ENSAPOG00000022221	rpusd1	98	43.709	Acanthochromis_polyacanthus
ENSPCAG00000002258	RPUSD1	100	68.874	ENSAMEG00000007461	RPUSD1	100	68.874	Ailuropoda_melanoleuca
ENSPCAG00000002258	RPUSD1	98	44.444	ENSACIG00000015863	rpusd1	98	45.098	Amphilophus_citrinellus
ENSPCAG00000002258	RPUSD1	98	43.279	ENSAOCG00000021975	rpusd1	95	43.279	Amphiprion_ocellaris
ENSPCAG00000002258	RPUSD1	98	43.607	ENSAPEG00000001316	rpusd1	95	43.607	Amphiprion_percula
ENSPCAG00000002258	RPUSD1	84	48.617	ENSATEG00000002984	rpusd1	98	44.590	Anabas_testudineus
ENSPCAG00000002258	RPUSD1	66	53.398	ENSAPLG00000012316	RPUSD1	84	53.398	Anas_platyrhynchos
ENSPCAG00000002258	RPUSD1	99	54.455	ENSACAG00000008953	RPUSD1	100	54.455	Anolis_carolinensis
ENSPCAG00000002258	RPUSD1	100	69.551	ENSANAG00000024709	RPUSD1	100	69.872	Aotus_nancymaae
ENSPCAG00000002258	RPUSD1	70	67.797	ENSACLG00000013692	rpusd1	77	67.797	Astatotilapia_calliptera
ENSPCAG00000002258	RPUSD1	99	45.695	ENSAMXG00000019802	rpusd1	100	45.695	Astyanax_mexicanus
ENSPCAG00000002258	RPUSD1	100	69.481	ENSBTAG00000000179	RPUSD1	100	70.130	Bos_taurus
ENSPCAG00000002258	RPUSD1	100	69.551	ENSCJAG00000012253	RPUSD1	100	69.551	Callithrix_jacchus
ENSPCAG00000002258	RPUSD1	99	70.764	ENSCAFG00000019614	RPUSD1	99	71.096	Canis_familiaris
ENSPCAG00000002258	RPUSD1	99	70.764	ENSCAFG00020008891	RPUSD1	99	71.096	Canis_lupus_dingo
ENSPCAG00000002258	RPUSD1	100	69.481	ENSCHIG00000012872	RPUSD1	100	70.130	Capra_hircus
ENSPCAG00000002258	RPUSD1	100	69.205	ENSTSYG00000036934	RPUSD1	100	69.205	Carlito_syrichta
ENSPCAG00000002258	RPUSD1	100	66.340	ENSCAPG00000014219	RPUSD1	100	66.340	Cavia_aperea
ENSPCAG00000002258	RPUSD1	100	66.340	ENSCPOG00000034604	RPUSD1	100	66.340	Cavia_porcellus
ENSPCAG00000002258	RPUSD1	100	69.872	ENSCCAG00000034385	RPUSD1	100	69.872	Cebus_capucinus
ENSPCAG00000002258	RPUSD1	100	67.949	ENSCATG00000042983	RPUSD1	100	67.949	Cercocebus_atys
ENSPCAG00000002258	RPUSD1	100	65.359	ENSCLAG00000013966	RPUSD1	100	65.359	Chinchilla_lanigera
ENSPCAG00000002258	RPUSD1	100	67.628	ENSCSAG00000012121	RPUSD1	100	67.628	Chlorocebus_sabaeus
ENSPCAG00000002258	RPUSD1	99	50.820	ENSCPBG00000021101	RPUSD1	99	50.820	Chrysemys_picta_bellii
ENSPCAG00000002258	RPUSD1	91	70.182	ENSCANG00000028576	RPUSD1	98	70.182	Colobus_angolensis_palliatus
ENSPCAG00000002258	RPUSD1	100	66.007	ENSCGRG00001014253	Rpusd1	100	66.007	Cricetulus_griseus_chok1gshd
ENSPCAG00000002258	RPUSD1	100	66.007	ENSCGRG00000017995	Rpusd1	100	66.007	Cricetulus_griseus_crigri
ENSPCAG00000002258	RPUSD1	99	44.000	ENSCSEG00000018512	rpusd1	100	44.000	Cynoglossus_semilaevis
ENSPCAG00000002258	RPUSD1	98	43.000	ENSCVAG00000022746	rpusd1	98	43.000	Cyprinodon_variegatus
ENSPCAG00000002258	RPUSD1	99	48.161	ENSDARG00000060192	rpusd1	100	48.161	Danio_rerio
ENSPCAG00000002258	RPUSD1	100	69.872	ENSDNOG00000003721	RPUSD1	100	70.323	Dasypus_novemcinctus
ENSPCAG00000002258	RPUSD1	100	69.967	ENSDORG00000026656	Rpusd1	100	70.297	Dipodomys_ordii
ENSPCAG00000002258	RPUSD1	97	36.774	ENSEBUG00000008767	rpusd1	93	36.774	Eptatretus_burgeri
ENSPCAG00000002258	RPUSD1	99	69.206	ENSEASG00005018421	RPUSD1	75	69.206	Equus_asinus_asinus
ENSPCAG00000002258	RPUSD1	84	45.669	ENSELUG00000014307	rpusd1	88	40.984	Esox_lucius
ENSPCAG00000002258	RPUSD1	100	69.868	ENSFCAG00000010359	RPUSD1	100	69.868	Felis_catus
ENSPCAG00000002258	RPUSD1	99	52.131	ENSFALG00000003211	RPUSD1	100	52.131	Ficedula_albicollis
ENSPCAG00000002258	RPUSD1	100	66.667	ENSFDAG00000013398	RPUSD1	100	66.667	Fukomys_damarensis
ENSPCAG00000002258	RPUSD1	98	42.244	ENSFHEG00000004736	rpusd1	98	42.810	Fundulus_heteroclitus
ENSPCAG00000002258	RPUSD1	84	47.826	ENSGMOG00000010756	rpusd1	98	43.421	Gadus_morhua
ENSPCAG00000002258	RPUSD1	99	53.115	ENSGALG00000005315	RPUSD1	100	53.115	Gallus_gallus
ENSPCAG00000002258	RPUSD1	98	43.667	ENSGAFG00000009886	rpusd1	98	43.667	Gambusia_affinis
ENSPCAG00000002258	RPUSD1	83	48.800	ENSGACG00000014276	rpusd1	97	44.371	Gasterosteus_aculeatus
ENSPCAG00000002258	RPUSD1	99	50.820	ENSGAGG00000004181	RPUSD1	99	50.820	Gopherus_agassizii
ENSPCAG00000002258	RPUSD1	100	67.628	ENSGGOG00000013997	RPUSD1	99	73.143	Gorilla_gorilla
ENSPCAG00000002258	RPUSD1	84	49.802	ENSHBUG00000023728	rpusd1	98	45.603	Haplochromis_burtoni
ENSPCAG00000002258	RPUSD1	100	67.320	ENSHGLG00000002595	RPUSD1	100	67.320	Heterocephalus_glaber_female
ENSPCAG00000002258	RPUSD1	100	67.320	ENSHGLG00100014303	RPUSD1	100	67.320	Heterocephalus_glaber_male
ENSPCAG00000002258	RPUSD1	98	44.595	ENSHCOG00000002390	rpusd1	99	44.595	Hippocampus_comes
ENSPCAG00000002258	RPUSD1	99	48.684	ENSIPUG00000001570	rpusd1	99	48.684	Ictalurus_punctatus
ENSPCAG00000002258	RPUSD1	100	68.627	ENSSTOG00000004276	RPUSD1	100	68.627	Ictidomys_tridecemlineatus
ENSPCAG00000002258	RPUSD1	100	67.320	ENSJJAG00000015696	Rpusd1	100	67.320	Jaculus_jaculus
ENSPCAG00000002258	RPUSD1	98	43.333	ENSKMAG00000017287	rpusd1	98	44.000	Kryptolebias_marmoratus
ENSPCAG00000002258	RPUSD1	98	43.279	ENSLBEG00000022502	rpusd1	98	43.934	Labrus_bergylta
ENSPCAG00000002258	RPUSD1	98	43.279	ENSLBEG00000013354	RPUSD1	98	43.934	Labrus_bergylta
ENSPCAG00000002258	RPUSD1	99	50.327	ENSLACG00000008869	RPUSD1	99	50.327	Latimeria_chalumnae
ENSPCAG00000002258	RPUSD1	72	55.093	ENSLOCG00000005682	rpusd1	99	55.093	Lepisosteus_oculatus
ENSPCAG00000002258	RPUSD1	100	75.828	ENSLAFG00000002115	RPUSD1	100	75.828	Loxodonta_africana
ENSPCAG00000002258	RPUSD1	100	67.949	ENSMFAG00000003961	RPUSD1	100	67.949	Macaca_fascicularis
ENSPCAG00000002258	RPUSD1	100	67.949	ENSMMUG00000000842	RPUSD1	100	67.949	Macaca_mulatta
ENSPCAG00000002258	RPUSD1	100	67.949	ENSMNEG00000042712	RPUSD1	100	67.949	Macaca_nemestrina
ENSPCAG00000002258	RPUSD1	100	67.949	ENSMLEG00000030591	RPUSD1	100	67.949	Mandrillus_leucophaeus
ENSPCAG00000002258	RPUSD1	84	49.012	ENSMAMG00000004735	rpusd1	98	44.444	Mastacembelus_armatus
ENSPCAG00000002258	RPUSD1	84	50.198	ENSMZEG00005003214	rpusd1	98	45.928	Maylandia_zebra
ENSPCAG00000002258	RPUSD1	97	52.685	ENSMGAG00000005447	RPUSD1	99	52.685	Meleagris_gallopavo
ENSPCAG00000002258	RPUSD1	87	59.774	ENSMAUG00000019998	Rpusd1	100	59.774	Mesocricetus_auratus
ENSPCAG00000002258	RPUSD1	100	68.404	ENSMICG00000017561	RPUSD1	100	68.404	Microcebus_murinus
ENSPCAG00000002258	RPUSD1	99	67.869	ENSMOCG00000014082	Rpusd1	99	67.869	Microtus_ochrogaster
ENSPCAG00000002258	RPUSD1	81	48.163	ENSMMOG00000012569	rpusd1	99	43.729	Mola_mola
ENSPCAG00000002258	RPUSD1	100	55.128	ENSMODG00000016882	RPUSD1	100	55.449	Monodelphis_domestica
ENSPCAG00000002258	RPUSD1	98	44.771	ENSMALG00000017818	rpusd1	98	44.444	Monopterus_albus
ENSPCAG00000002258	RPUSD1	100	66.993	MGP_CAROLIEiJ_G0021244	Rpusd1	100	66.993	Mus_caroli
ENSPCAG00000002258	RPUSD1	100	67.647	ENSMUSG00000041199	Rpusd1	100	67.647	Mus_musculus
ENSPCAG00000002258	RPUSD1	100	65.260	MGP_PahariEiJ_G0023562	Rpusd1	99	66.230	Mus_pahari
ENSPCAG00000002258	RPUSD1	100	67.647	MGP_SPRETEiJ_G0022155	Rpusd1	100	67.647	Mus_spretus
ENSPCAG00000002258	RPUSD1	100	67.219	ENSMPUG00000015897	RPUSD1	100	67.881	Mustela_putorius_furo
ENSPCAG00000002258	RPUSD1	100	67.308	ENSMLUG00000001089	RPUSD1	100	67.308	Myotis_lucifugus
ENSPCAG00000002258	RPUSD1	100	66.667	ENSNGAG00000003595	Rpusd1	100	66.667	Nannospalax_galili
ENSPCAG00000002258	RPUSD1	82	50.407	ENSNBRG00000006457	rpusd1	98	45.918	Neolamprologus_brichardi
ENSPCAG00000002258	RPUSD1	55	74.286	ENSNLEG00000008424	-	100	74.286	Nomascus_leucogenys
ENSPCAG00000002258	RPUSD1	100	56.863	ENSMEUG00000016049	RPUSD1	100	56.863	Notamacropus_eugenii
ENSPCAG00000002258	RPUSD1	99	62.542	ENSOPRG00000008340	RPUSD1	99	62.542	Ochotona_princeps
ENSPCAG00000002258	RPUSD1	100	65.033	ENSODEG00000016945	RPUSD1	100	65.033	Octodon_degus
ENSPCAG00000002258	RPUSD1	84	49.407	ENSONIG00000015672	rpusd1	99	45.277	Oreochromis_niloticus
ENSPCAG00000002258	RPUSD1	99	44.371	ENSORLG00000013009	rpusd1	99	44.371	Oryzias_latipes
ENSPCAG00000002258	RPUSD1	99	44.040	ENSORLG00020010382	rpusd1	99	44.040	Oryzias_latipes_hni
ENSPCAG00000002258	RPUSD1	99	43.709	ENSORLG00015021354	rpusd1	99	43.709	Oryzias_latipes_hsok
ENSPCAG00000002258	RPUSD1	98	45.455	ENSOMEG00000021426	rpusd1	98	45.455	Oryzias_melastigma
ENSPCAG00000002258	RPUSD1	100	69.551	ENSOGAG00000003795	RPUSD1	100	69.551	Otolemur_garnettii
ENSPCAG00000002258	RPUSD1	100	69.156	ENSOARG00000014254	RPUSD1	100	69.256	Ovis_aries
ENSPCAG00000002258	RPUSD1	100	67.628	ENSPPAG00000034797	RPUSD1	100	67.628	Pan_paniscus
ENSPCAG00000002258	RPUSD1	100	69.536	ENSPPRG00000012389	RPUSD1	100	69.536	Panthera_pardus
ENSPCAG00000002258	RPUSD1	100	69.205	ENSPTIG00000008545	RPUSD1	92	69.205	Panthera_tigris_altaica
ENSPCAG00000002258	RPUSD1	100	67.628	ENSPTRG00000007565	RPUSD1	100	67.628	Pan_troglodytes
ENSPCAG00000002258	RPUSD1	100	67.308	ENSPANG00000024401	RPUSD1	100	67.308	Papio_anubis
ENSPCAG00000002258	RPUSD1	99	47.097	ENSPKIG00000018890	rpusd1	91	47.097	Paramormyrops_kingsleyae
ENSPCAG00000002258	RPUSD1	99	52.117	ENSPSIG00000013945	RPUSD1	100	52.117	Pelodiscus_sinensis
ENSPCAG00000002258	RPUSD1	98	44.558	ENSPMGG00000014950	rpusd1	98	44.558	Periophthalmus_magnuspinnatus
ENSPCAG00000002258	RPUSD1	100	66.993	ENSPEMG00000000497	Rpusd1	100	66.993	Peromyscus_maniculatus_bairdii
ENSPCAG00000002258	RPUSD1	85	44.961	ENSPMAG00000001563	rpusd1	99	41.254	Petromyzon_marinus
ENSPCAG00000002258	RPUSD1	100	56.863	ENSPCIG00000021216	-	94	56.863	Phascolarctos_cinereus
ENSPCAG00000002258	RPUSD1	98	44.482	ENSPFOG00000007946	rpusd1	98	44.482	Poecilia_formosa
ENSPCAG00000002258	RPUSD1	98	44.482	ENSPLAG00000011925	rpusd1	98	44.482	Poecilia_latipinna
ENSPCAG00000002258	RPUSD1	98	43.813	ENSPMEG00000002910	rpusd1	98	43.813	Poecilia_mexicana
ENSPCAG00000002258	RPUSD1	98	44.518	ENSPREG00000019851	rpusd1	98	44.518	Poecilia_reticulata
ENSPCAG00000002258	RPUSD1	100	69.231	ENSPCOG00000022582	RPUSD1	100	69.231	Propithecus_coquereli
ENSPCAG00000002258	RPUSD1	100	66.773	ENSPVAG00000013104	RPUSD1	100	66.773	Pteropus_vampyrus
ENSPCAG00000002258	RPUSD1	98	46.259	ENSPNYG00000024076	rpusd1	98	45.918	Pundamilia_nyererei
ENSPCAG00000002258	RPUSD1	99	46.512	ENSPNAG00000013806	rpusd1	100	46.512	Pygocentrus_nattereri
ENSPCAG00000002258	RPUSD1	100	66.667	ENSRNOG00000023639	Rpusd1	100	66.667	Rattus_norvegicus
ENSPCAG00000002258	RPUSD1	100	67.628	ENSRBIG00000030238	RPUSD1	100	67.628	Rhinopithecus_bieti
ENSPCAG00000002258	RPUSD1	100	67.628	ENSRROG00000036663	RPUSD1	100	67.628	Rhinopithecus_roxellana
ENSPCAG00000002258	RPUSD1	100	70.530	ENSSBOG00000033063	RPUSD1	100	71.192	Saimiri_boliviensis_boliviensis
ENSPCAG00000002258	RPUSD1	100	55.882	ENSSHAG00000013500	RPUSD1	100	55.882	Sarcophilus_harrisii
ENSPCAG00000002258	RPUSD1	85	71.667	ENSSFOG00015014394	rpusd1	78	71.667	Scleropages_formosus
ENSPCAG00000002258	RPUSD1	98	42.951	ENSSMAG00000008045	rpusd1	91	43.607	Scophthalmus_maximus
ENSPCAG00000002258	RPUSD1	84	51.383	ENSSDUG00000001829	rpusd1	95	46.230	Seriola_dumerili
ENSPCAG00000002258	RPUSD1	84	51.383	ENSSLDG00000020853	rpusd1	95	46.230	Seriola_lalandi_dorsalis
ENSPCAG00000002258	RPUSD1	55	63.473	ENSSARG00000011187	-	100	63.473	Sorex_araneus
ENSPCAG00000002258	RPUSD1	62	53.125	ENSSPUG00000005119	-	100	53.125	Sphenodon_punctatus
ENSPCAG00000002258	RPUSD1	98	43.607	ENSSPAG00000012708	rpusd1	98	44.262	Stegastes_partitus
ENSPCAG00000002258	RPUSD1	100	68.910	ENSSSCG00000008000	RPUSD1	99	71.984	Sus_scrofa
ENSPCAG00000002258	RPUSD1	85	55.686	ENSTGUG00000015375	RPUSD1	100	55.686	Taeniopygia_guttata
ENSPCAG00000002258	RPUSD1	98	43.137	ENSTRUG00000003041	rpusd1	98	43.791	Takifugu_rubripes
ENSPCAG00000002258	RPUSD1	98	41.017	ENSTNIG00000002660	rpusd1	99	41.017	Tetraodon_nigroviridis
ENSPCAG00000002258	RPUSD1	99	67.846	ENSTTRG00000010167	RPUSD1	99	67.846	Tursiops_truncatus
ENSPCAG00000002258	RPUSD1	100	69.205	ENSUAMG00000012736	RPUSD1	100	69.536	Ursus_americanus
ENSPCAG00000002258	RPUSD1	100	69.205	ENSUMAG00000021174	RPUSD1	100	69.536	Ursus_maritimus
ENSPCAG00000002258	RPUSD1	99	71.096	ENSVVUG00000012357	RPUSD1	99	71.096	Vulpes_vulpes
ENSPCAG00000002258	RPUSD1	100	49.191	ENSXETG00000007184	rpusd1	100	49.191	Xenopus_tropicalis
ENSPCAG00000002258	RPUSD1	98	43.333	ENSXCOG00000017930	rpusd1	98	43.333	Xiphophorus_couchianus
ENSPCAG00000002258	RPUSD1	98	44.333	ENSXMAG00000024084	rpusd1	98	44.333	Xiphophorus_maculatus