EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002340 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 16279 bases
Position: chrGeneScaffold_4751:83128-99406
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002210	TRM13	PF05206.14	6.3e-92	1	1
ENSPCAP00000002210	zf-U11-48K	PF05253.12	1.6e-09	1	1
ENSPCAP00000002210	zf-TRM13_CCCH	PF11722.8	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002348	TRMT13-201	1437	-	ENSPCAP00000002210	478 (aa)	-	UPI00018AFCBC

Gene Model

Click here to download ENSPCAG00000002340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002340	TRMT13	100	88.358	ENSG00000122435	TRMT13	100	88.358	Homo_sapiens
ENSPCAG00000002340	TRMT13	95	48.000	ENSAPOG00000015131	trmt13	99	47.984	Acanthochromis_polyacanthus
ENSPCAG00000002340	TRMT13	100	88.150	ENSAMEG00000008917	TRMT13	100	88.150	Ailuropoda_melanoleuca
ENSPCAG00000002340	TRMT13	95	52.128	ENSACIG00000005804	trmt13	97	50.731	Amphilophus_citrinellus
ENSPCAG00000002340	TRMT13	95	48.104	ENSAOCG00000023585	trmt13	99	48.104	Amphiprion_ocellaris
ENSPCAG00000002340	TRMT13	95	47.904	ENSAPEG00000004025	trmt13	99	47.904	Amphiprion_percula
ENSPCAG00000002340	TRMT13	99	50.617	ENSATEG00000006597	trmt13	99	50.617	Anabas_testudineus
ENSPCAG00000002340	TRMT13	87	67.213	ENSAPLG00000014924	TRMT13	99	67.213	Anas_platyrhynchos
ENSPCAG00000002340	TRMT13	96	64.502	ENSACAG00000003498	TRMT13	98	64.502	Anolis_carolinensis
ENSPCAG00000002340	TRMT13	100	88.565	ENSANAG00000019525	TRMT13	100	88.565	Aotus_nancymaae
ENSPCAG00000002340	TRMT13	96	52.654	ENSACLG00000020018	trmt13	99	52.654	Astatotilapia_calliptera
ENSPCAG00000002340	TRMT13	95	53.291	ENSAMXG00000017963	trmt13	97	53.503	Astyanax_mexicanus
ENSPCAG00000002340	TRMT13	100	87.526	ENSBTAG00000015781	TRMT13	100	87.526	Bos_taurus
ENSPCAG00000002340	TRMT13	100	86.639	ENSCJAG00000000200	TRMT13	99	88.073	Callithrix_jacchus
ENSPCAG00000002340	TRMT13	65	91.054	ENSCAFG00000020021	TRMT13	99	91.054	Canis_familiaris
ENSPCAG00000002340	TRMT13	57	88.000	ENSCAFG00020011572	TRMT13	95	88.000	Canis_lupus_dingo
ENSPCAG00000002340	TRMT13	100	87.318	ENSCHIG00000015395	TRMT13	100	87.318	Capra_hircus
ENSPCAG00000002340	TRMT13	98	79.789	ENSTSYG00000010811	TRMT13	98	88.889	Carlito_syrichta
ENSPCAG00000002340	TRMT13	75	67.218	ENSCAPG00000009085	TRMT13	100	67.769	Cavia_aperea
ENSPCAG00000002340	TRMT13	99	86.013	ENSCPOG00000000694	TRMT13	99	86.013	Cavia_porcellus
ENSPCAG00000002340	TRMT13	100	88.565	ENSCCAG00000023772	TRMT13	100	88.565	Cebus_capucinus
ENSPCAG00000002340	TRMT13	99	88.100	ENSCATG00000033556	TRMT13	100	87.156	Cercocebus_atys
ENSPCAG00000002340	TRMT13	89	81.733	ENSCLAG00000008220	TRMT13	100	82.436	Chinchilla_lanigera
ENSPCAG00000002340	TRMT13	100	88.358	ENSCSAG00000001506	TRMT13	100	88.358	Chlorocebus_sabaeus
ENSPCAG00000002340	TRMT13	99	68.344	ENSCPBG00000026671	TRMT13	99	68.344	Chrysemys_picta_bellii
ENSPCAG00000002340	TRMT13	100	88.565	ENSCANG00000034659	TRMT13	100	88.565	Colobus_angolensis_palliatus
ENSPCAG00000002340	TRMT13	99	85.000	ENSCGRG00001021601	Trmt13	99	85.000	Cricetulus_griseus_chok1gshd
ENSPCAG00000002340	TRMT13	53	83.922	ENSCGRG00000000093	-	98	83.922	Cricetulus_griseus_crigri
ENSPCAG00000002340	TRMT13	96	49.458	ENSCSEG00000000591	trmt13	98	49.458	Cynoglossus_semilaevis
ENSPCAG00000002340	TRMT13	95	49.684	ENSCVAG00000017342	trmt13	93	49.684	Cyprinodon_variegatus
ENSPCAG00000002340	TRMT13	95	57.359	ENSDARG00000102846	trmt13	96	57.359	Danio_rerio
ENSPCAG00000002340	TRMT13	55	87.085	ENSDNOG00000001710	TRMT13	83	87.085	Dasypus_novemcinctus
ENSPCAG00000002340	TRMT13	99	84.134	ENSDORG00000015808	Trmt13	99	84.134	Dipodomys_ordii
ENSPCAG00000002340	TRMT13	95	30.818	FBgn0037435	CG18048	94	30.818	Drosophila_melanogaster
ENSPCAG00000002340	TRMT13	99	75.783	ENSETEG00000005819	TRMT13	99	75.783	Echinops_telfairi
ENSPCAG00000002340	TRMT13	95	44.968	ENSEBUG00000014444	trmt13	97	44.968	Eptatretus_burgeri
ENSPCAG00000002340	TRMT13	100	89.813	ENSEASG00005015918	TRMT13	100	89.813	Equus_asinus_asinus
ENSPCAG00000002340	TRMT13	100	89.813	ENSECAG00000022626	TRMT13	100	89.813	Equus_caballus
ENSPCAG00000002340	TRMT13	78	80.328	ENSEEUG00000000294	TRMT13	79	80.328	Erinaceus_europaeus
ENSPCAG00000002340	TRMT13	97	55.789	ENSELUG00000003803	trmt13	99	55.789	Esox_lucius
ENSPCAG00000002340	TRMT13	100	88.773	ENSFCAG00000030618	TRMT13	100	88.773	Felis_catus
ENSPCAG00000002340	TRMT13	99	64.927	ENSFALG00000002424	TRMT13	99	64.927	Ficedula_albicollis
ENSPCAG00000002340	TRMT13	99	86.458	ENSFDAG00000006342	TRMT13	99	86.458	Fukomys_damarensis
ENSPCAG00000002340	TRMT13	77	52.356	ENSFHEG00000022954	trmt13	96	51.629	Fundulus_heteroclitus
ENSPCAG00000002340	TRMT13	95	49.336	ENSGMOG00000013223	trmt13	100	49.779	Gadus_morhua
ENSPCAG00000002340	TRMT13	95	65.152	ENSGALG00000005290	TRMT13	98	64.151	Gallus_gallus
ENSPCAG00000002340	TRMT13	75	50.269	ENSGAFG00000001577	trmt13	81	50.269	Gambusia_affinis
ENSPCAG00000002340	TRMT13	95	51.059	ENSGACG00000013428	trmt13	97	51.398	Gasterosteus_aculeatus
ENSPCAG00000002340	TRMT13	97	69.723	ENSGAGG00000023303	TRMT13	95	75.191	Gopherus_agassizii
ENSPCAG00000002340	TRMT13	100	88.150	ENSGGOG00000005616	TRMT13	100	88.150	Gorilla_gorilla
ENSPCAG00000002340	TRMT13	96	53.079	ENSHBUG00000007754	trmt13	99	53.079	Haplochromis_burtoni
ENSPCAG00000002340	TRMT13	99	86.875	ENSHGLG00000002164	TRMT13	99	86.875	Heterocephalus_glaber_female
ENSPCAG00000002340	TRMT13	99	86.875	ENSHGLG00100001618	TRMT13	99	86.875	Heterocephalus_glaber_male
ENSPCAG00000002340	TRMT13	96	48.491	ENSHCOG00000020553	trmt13	98	48.491	Hippocampus_comes
ENSPCAG00000002340	TRMT13	95	56.209	ENSIPUG00000024787	trmt13	98	57.484	Ictalurus_punctatus
ENSPCAG00000002340	TRMT13	99	89.474	ENSSTOG00000013483	TRMT13	99	89.474	Ictidomys_tridecemlineatus
ENSPCAG00000002340	TRMT13	98	85.106	ENSJJAG00000018012	Trmt13	99	85.106	Jaculus_jaculus
ENSPCAG00000002340	TRMT13	68	49.394	ENSKMAG00000007639	trmt13	97	49.226	Kryptolebias_marmoratus
ENSPCAG00000002340	TRMT13	96	49.266	ENSLBEG00000020238	trmt13	99	49.375	Labrus_bergylta
ENSPCAG00000002340	TRMT13	97	59.831	ENSLACG00000013153	TRMT13	100	59.406	Latimeria_chalumnae
ENSPCAG00000002340	TRMT13	95	58.785	ENSLOCG00000000418	trmt13	97	58.824	Lepisosteus_oculatus
ENSPCAG00000002340	TRMT13	77	90.270	ENSLAFG00000002383	TRMT13	100	90.270	Loxodonta_africana
ENSPCAG00000002340	TRMT13	100	87.942	ENSMFAG00000034681	TRMT13	100	88.073	Macaca_fascicularis
ENSPCAG00000002340	TRMT13	100	87.942	ENSMMUG00000004243	TRMT13	100	88.073	Macaca_mulatta
ENSPCAG00000002340	TRMT13	100	87.942	ENSMNEG00000036102	TRMT13	100	88.073	Macaca_nemestrina
ENSPCAG00000002340	TRMT13	99	88.309	ENSMLEG00000034258	TRMT13	100	88.073	Mandrillus_leucophaeus
ENSPCAG00000002340	TRMT13	96	50.951	ENSMAMG00000016597	trmt13	98	50.951	Mastacembelus_armatus
ENSPCAG00000002340	TRMT13	96	52.442	ENSMZEG00005020959	trmt13	99	52.442	Maylandia_zebra
ENSPCAG00000002340	TRMT13	89	65.888	ENSMGAG00000006970	TRMT13	100	65.888	Meleagris_gallopavo
ENSPCAG00000002340	TRMT13	99	83.507	ENSMAUG00000010448	Trmt13	99	83.507	Mesocricetus_auratus
ENSPCAG00000002340	TRMT13	100	89.813	ENSMICG00000005283	TRMT13	100	89.813	Microcebus_murinus
ENSPCAG00000002340	TRMT13	99	81.211	ENSMOCG00000019914	Trmt13	99	81.211	Microtus_ochrogaster
ENSPCAG00000002340	TRMT13	54	50.566	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSPCAG00000002340	TRMT13	97	75.957	ENSMODG00000003646	TRMT13	97	75.957	Monodelphis_domestica
ENSPCAG00000002340	TRMT13	96	51.304	ENSMALG00000020965	trmt13	97	51.304	Monopterus_albus
ENSPCAG00000002340	TRMT13	99	84.310	MGP_CAROLIEiJ_G0025568	Trmt13	99	84.310	Mus_caroli
ENSPCAG00000002340	TRMT13	99	84.310	ENSMUSG00000033439	Trmt13	99	84.310	Mus_musculus
ENSPCAG00000002340	TRMT13	99	84.728	MGP_PahariEiJ_G0027014	Trmt13	99	84.728	Mus_pahari
ENSPCAG00000002340	TRMT13	99	84.519	MGP_SPRETEiJ_G0026518	Trmt13	99	84.519	Mus_spretus
ENSPCAG00000002340	TRMT13	79	86.614	ENSMPUG00000002078	-	100	86.614	Mustela_putorius_furo
ENSPCAG00000002340	TRMT13	100	77.755	ENSMLUG00000002124	TRMT13	100	77.755	Myotis_lucifugus
ENSPCAG00000002340	TRMT13	96	48.941	ENSNBRG00000006783	trmt13	95	49.675	Neolamprologus_brichardi
ENSPCAG00000002340	TRMT13	100	87.734	ENSNLEG00000035917	TRMT13	100	87.734	Nomascus_leucogenys
ENSPCAG00000002340	TRMT13	51	70.565	ENSMEUG00000013346	-	100	70.565	Notamacropus_eugenii
ENSPCAG00000002340	TRMT13	66	88.235	ENSOPRG00000012048	TRMT13	67	88.235	Ochotona_princeps
ENSPCAG00000002340	TRMT13	96	52.654	ENSONIG00000004574	trmt13	99	52.654	Oreochromis_niloticus
ENSPCAG00000002340	TRMT13	90	72.120	ENSOANG00000012057	TRMT13	100	72.120	Ornithorhynchus_anatinus
ENSPCAG00000002340	TRMT13	100	87.526	ENSOCUG00000023095	TRMT13	100	87.526	Oryctolagus_cuniculus
ENSPCAG00000002340	TRMT13	96	47.660	ENSORLG00000003320	trmt13	99	47.660	Oryzias_latipes
ENSPCAG00000002340	TRMT13	95	47.722	ENSORLG00020005972	trmt13	97	48.211	Oryzias_latipes_hni
ENSPCAG00000002340	TRMT13	96	50.533	ENSORLG00015002270	trmt13	99	51.173	Oryzias_latipes_hsok
ENSPCAG00000002340	TRMT13	97	49.682	ENSOMEG00000006724	trmt13	95	50.737	Oryzias_melastigma
ENSPCAG00000002340	TRMT13	98	88.584	ENSOGAG00000005618	TRMT13	96	88.703	Otolemur_garnettii
ENSPCAG00000002340	TRMT13	100	87.318	ENSOARG00000017983	TRMT13	100	87.318	Ovis_aries
ENSPCAG00000002340	TRMT13	100	87.734	ENSPPAG00000043736	TRMT13	100	87.734	Pan_paniscus
ENSPCAG00000002340	TRMT13	100	89.189	ENSPPRG00000003424	TRMT13	100	89.189	Panthera_pardus
ENSPCAG00000002340	TRMT13	100	89.189	ENSPTIG00000018598	TRMT13	100	89.189	Panthera_tigris_altaica
ENSPCAG00000002340	TRMT13	100	87.734	ENSPTRG00000001001	TRMT13	100	87.734	Pan_troglodytes
ENSPCAG00000002340	TRMT13	100	88.358	ENSPANG00000007598	TRMT13	100	88.358	Papio_anubis
ENSPCAG00000002340	TRMT13	96	55.315	ENSPKIG00000001514	trmt13	98	55.315	Paramormyrops_kingsleyae
ENSPCAG00000002340	TRMT13	86	68.585	ENSPSIG00000012703	TRMT13	99	68.585	Pelodiscus_sinensis
ENSPCAG00000002340	TRMT13	96	51.404	ENSPMGG00000013298	trmt13	94	51.404	Periophthalmus_magnuspinnatus
ENSPCAG00000002340	TRMT13	99	81.837	ENSPEMG00000000275	Trmt13	99	81.837	Peromyscus_maniculatus_bairdii
ENSPCAG00000002340	TRMT13	95	46.025	ENSPMAG00000000823	trmt13	97	46.025	Petromyzon_marinus
ENSPCAG00000002340	TRMT13	98	75.738	ENSPCIG00000007699	TRMT13	98	76.371	Phascolarctos_cinereus
ENSPCAG00000002340	TRMT13	99	48.837	ENSPFOG00000008675	trmt13	98	48.837	Poecilia_formosa
ENSPCAG00000002340	TRMT13	95	48.723	ENSPLAG00000009709	trmt13	99	48.723	Poecilia_latipinna
ENSPCAG00000002340	TRMT13	95	47.009	ENSPMEG00000022954	trmt13	99	47.009	Poecilia_mexicana
ENSPCAG00000002340	TRMT13	77	50.000	ENSPREG00000005645	trmt13	91	50.182	Poecilia_reticulata
ENSPCAG00000002340	TRMT13	100	87.526	ENSPPYG00000001120	TRMT13	100	87.526	Pongo_abelii
ENSPCAG00000002340	TRMT13	100	88.981	ENSPCOG00000017984	TRMT13	100	89.908	Propithecus_coquereli
ENSPCAG00000002340	TRMT13	99	88.935	ENSPVAG00000017430	TRMT13	99	88.935	Pteropus_vampyrus
ENSPCAG00000002340	TRMT13	96	51.907	ENSPNYG00000013690	trmt13	99	51.907	Pundamilia_nyererei
ENSPCAG00000002340	TRMT13	95	54.957	ENSPNAG00000022130	trmt13	97	54.957	Pygocentrus_nattereri
ENSPCAG00000002340	TRMT13	99	84.310	ENSRNOG00000015140	Trmt13	96	84.310	Rattus_norvegicus
ENSPCAG00000002340	TRMT13	100	88.565	ENSRBIG00000037686	TRMT13	100	88.565	Rhinopithecus_bieti
ENSPCAG00000002340	TRMT13	100	88.565	ENSRROG00000044057	TRMT13	100	88.565	Rhinopithecus_roxellana
ENSPCAG00000002340	TRMT13	100	88.150	ENSSBOG00000026541	TRMT13	100	88.150	Saimiri_boliviensis_boliviensis
ENSPCAG00000002340	TRMT13	90	75.862	ENSSHAG00000005213	TRMT13	97	75.862	Sarcophilus_harrisii
ENSPCAG00000002340	TRMT13	96	54.194	ENSSFOG00015017560	trmt13	98	54.194	Scleropages_formosus
ENSPCAG00000002340	TRMT13	96	50.210	ENSSMAG00000014592	trmt13	97	50.210	Scophthalmus_maximus
ENSPCAG00000002340	TRMT13	95	50.951	ENSSDUG00000015508	trmt13	97	50.728	Seriola_dumerili
ENSPCAG00000002340	TRMT13	95	50.844	ENSSLDG00000019060	trmt13	96	50.844	Seriola_lalandi_dorsalis
ENSPCAG00000002340	TRMT13	99	75.105	ENSSARG00000010344	TRMT13	99	75.105	Sorex_araneus
ENSPCAG00000002340	TRMT13	95	68.053	ENSSPUG00000016339	TRMT13	99	68.053	Sphenodon_punctatus
ENSPCAG00000002340	TRMT13	95	51.509	ENSSPAG00000011922	trmt13	98	51.599	Stegastes_partitus
ENSPCAG00000002340	TRMT13	100	88.981	ENSSSCG00000006869	TRMT13	100	88.981	Sus_scrofa
ENSPCAG00000002340	TRMT13	97	66.452	ENSTGUG00000005253	TRMT13	99	66.452	Taeniopygia_guttata
ENSPCAG00000002340	TRMT13	95	50.321	ENSTRUG00000008400	trmt13	99	50.316	Takifugu_rubripes
ENSPCAG00000002340	TRMT13	86	72.596	ENSTBEG00000008911	TRMT13	100	72.596	Tupaia_belangeri
ENSPCAG00000002340	TRMT13	51	93.421	ENSTTRG00000015302	-	60	93.421	Tursiops_truncatus
ENSPCAG00000002340	TRMT13	100	83.891	ENSUAMG00000017251	TRMT13	100	83.891	Ursus_americanus
ENSPCAG00000002340	TRMT13	100	87.526	ENSUMAG00000007901	TRMT13	99	88.889	Ursus_maritimus
ENSPCAG00000002340	TRMT13	90	72.454	ENSVPAG00000001034	TRMT13	100	72.454	Vicugna_pacos
ENSPCAG00000002340	TRMT13	99	88.750	ENSVVUG00000021996	TRMT13	99	88.750	Vulpes_vulpes
ENSPCAG00000002340	TRMT13	96	55.531	ENSXETG00000013204	trmt13	96	55.677	Xenopus_tropicalis
ENSPCAG00000002340	TRMT13	95	48.511	ENSXMAG00000010765	trmt13	99	48.511	Xiphophorus_maculatus