EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000002520 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 363 bases
Position: chrGeneScaffold_6495:38407-38769
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002336	LSM	PF01423.22	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002478	LSM10-201	363	-	ENSPCAP00000002336	120 (aa)	-	UPI00018AF3BD

Gene Model

Click here to download ENSPCAG00000002520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000002520	LSM10	57	30.000	ENSPCAG00000013737	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002520	LSM10	100	90.244	ENSG00000181817	LSM10	100	90.244	Homo_sapiens
ENSPCAG00000002520	LSM10	100	90.244	ENSAMEG00000019854	LSM10	100	90.244	Ailuropoda_melanoleuca
ENSPCAG00000002520	LSM10	98	65.000	ENSACIG00000015420	oscp1a	79	65.000	Amphilophus_citrinellus
ENSPCAG00000002520	LSM10	91	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSPCAG00000002520	LSM10	96	68.376	ENSAOCG00000015618	LSM10	97	68.376	Amphiprion_ocellaris
ENSPCAG00000002520	LSM10	96	68.376	ENSAOCG00000014654	-	97	68.376	Amphiprion_ocellaris
ENSPCAG00000002520	LSM10	91	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSPCAG00000002520	LSM10	96	68.376	ENSAPEG00000021845	-	97	68.376	Amphiprion_percula
ENSPCAG00000002520	LSM10	96	60.870	ENSATEG00000006310	oscp1a	85	60.870	Anabas_testudineus
ENSPCAG00000002520	LSM10	96	68.376	ENSACAG00000001231	LSM10	95	68.376	Anolis_carolinensis
ENSPCAG00000002520	LSM10	100	91.057	ENSANAG00000018759	-	100	91.057	Aotus_nancymaae
ENSPCAG00000002520	LSM10	99	89.344	ENSANAG00000031489	-	100	89.344	Aotus_nancymaae
ENSPCAG00000002520	LSM10	97	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSPCAG00000002520	LSM10	98	65.254	ENSAMXG00000025301	oscp1a	98	65.254	Astyanax_mexicanus
ENSPCAG00000002520	LSM10	99	90.984	ENSBTAG00000024096	LSM10	100	90.984	Bos_taurus
ENSPCAG00000002520	LSM10	100	90.244	ENSCJAG00000044880	LSM10	100	90.244	Callithrix_jacchus
ENSPCAG00000002520	LSM10	100	91.870	ENSCAFG00000003382	LSM10	100	91.870	Canis_familiaris
ENSPCAG00000002520	LSM10	100	91.870	ENSCAFG00020008920	LSM10	100	91.870	Canis_lupus_dingo
ENSPCAG00000002520	LSM10	99	90.984	ENSCHIG00000009398	LSM10	100	90.984	Capra_hircus
ENSPCAG00000002520	LSM10	97	93.220	ENSCAPG00000012567	LSM10	96	93.220	Cavia_aperea
ENSPCAG00000002520	LSM10	97	93.220	ENSCPOG00000039302	LSM10	96	93.220	Cavia_porcellus
ENSPCAG00000002520	LSM10	99	89.344	ENSCCAG00000008378	-	99	89.344	Cebus_capucinus
ENSPCAG00000002520	LSM10	100	91.057	ENSCCAG00000018913	-	100	91.057	Cebus_capucinus
ENSPCAG00000002520	LSM10	100	91.870	ENSCATG00000006589	LSM10	100	91.870	Cercocebus_atys
ENSPCAG00000002520	LSM10	97	94.915	ENSCLAG00000008633	LSM10	96	94.915	Chinchilla_lanigera
ENSPCAG00000002520	LSM10	100	91.870	ENSCSAG00000000134	LSM10	100	91.870	Chlorocebus_sabaeus
ENSPCAG00000002520	LSM10	100	89.600	ENSCHOG00000008615	LSM10	100	89.600	Choloepus_hoffmanni
ENSPCAG00000002520	LSM10	85	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSPCAG00000002520	LSM10	100	91.870	ENSCANG00000019928	LSM10	100	91.870	Colobus_angolensis_palliatus
ENSPCAG00000002520	LSM10	97	93.220	ENSCGRG00001004317	-	97	93.220	Cricetulus_griseus_chok1gshd
ENSPCAG00000002520	LSM10	92	82.456	ENSCGRG00001022673	-	92	82.456	Cricetulus_griseus_chok1gshd
ENSPCAG00000002520	LSM10	97	93.220	ENSCGRG00000014935	-	97	93.220	Cricetulus_griseus_crigri
ENSPCAG00000002520	LSM10	92	82.456	ENSCGRG00000015514	-	92	82.456	Cricetulus_griseus_crigri
ENSPCAG00000002520	LSM10	96	63.248	ENSCSEG00000010374	oscp1a	78	63.793	Cynoglossus_semilaevis
ENSPCAG00000002520	LSM10	97	66.379	ENSCVAG00000001536	oscp1a	89	66.379	Cyprinodon_variegatus
ENSPCAG00000002520	LSM10	71	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSPCAG00000002520	LSM10	98	72.881	ENSDARG00000101222	oscp1a	98	72.881	Danio_rerio
ENSPCAG00000002520	LSM10	98	91.736	ENSDNOG00000036662	LSM10	98	91.736	Dasypus_novemcinctus
ENSPCAG00000002520	LSM10	97	92.373	ENSDORG00000007579	Lsm10	96	92.373	Dipodomys_ordii
ENSPCAG00000002520	LSM10	97	96.552	ENSETEG00000005703	LSM10	96	96.552	Echinops_telfairi
ENSPCAG00000002520	LSM10	96	53.782	ENSEBUG00000001312	oscp1a	96	53.782	Eptatretus_burgeri
ENSPCAG00000002520	LSM10	100	91.057	ENSEASG00005012194	LSM10	100	91.057	Equus_asinus_asinus
ENSPCAG00000002520	LSM10	100	91.870	ENSECAG00000005071	LSM10	100	91.870	Equus_caballus
ENSPCAG00000002520	LSM10	100	90.244	ENSEEUG00000012032	LSM10	100	90.244	Erinaceus_europaeus
ENSPCAG00000002520	LSM10	98	66.667	ENSELUG00000007452	oscp1a	98	66.667	Esox_lucius
ENSPCAG00000002520	LSM10	96	71.795	ENSFALG00000000851	LSM10	95	71.795	Ficedula_albicollis
ENSPCAG00000002520	LSM10	97	91.525	ENSFDAG00000021056	LSM10	96	91.525	Fukomys_damarensis
ENSPCAG00000002520	LSM10	93	66.667	ENSFHEG00000001058	oscp1a	98	66.667	Fundulus_heteroclitus
ENSPCAG00000002520	LSM10	95	62.609	ENSGMOG00000019832	oscp1a	97	62.609	Gadus_morhua
ENSPCAG00000002520	LSM10	98	73.109	ENSGALG00000002127	LSM10	97	73.109	Gallus_gallus
ENSPCAG00000002520	LSM10	98	59.836	ENSGAFG00000016445	oscp1a	98	59.836	Gambusia_affinis
ENSPCAG00000002520	LSM10	97	64.407	ENSGACG00000002329	oscp1a	97	64.407	Gasterosteus_aculeatus
ENSPCAG00000002520	LSM10	97	74.576	ENSGAGG00000024848	LSM10	96	74.576	Gopherus_agassizii
ENSPCAG00000002520	LSM10	100	91.870	ENSGGOG00000003556	LSM10	100	91.870	Gorilla_gorilla
ENSPCAG00000002520	LSM10	97	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSPCAG00000002520	LSM10	97	92.373	ENSHGLG00000011625	LSM10	96	92.373	Heterocephalus_glaber_female
ENSPCAG00000002520	LSM10	97	92.373	ENSHGLG00100001769	LSM10	96	92.373	Heterocephalus_glaber_male
ENSPCAG00000002520	LSM10	88	68.571	ENSIPUG00000005808	oscp1a	91	68.571	Ictalurus_punctatus
ENSPCAG00000002520	LSM10	100	91.870	ENSSTOG00000000606	LSM10	100	91.870	Ictidomys_tridecemlineatus
ENSPCAG00000002520	LSM10	97	65.254	ENSKMAG00000012143	oscp1a	98	65.254	Kryptolebias_marmoratus
ENSPCAG00000002520	LSM10	100	63.115	ENSLBEG00000017764	oscp1a	100	63.115	Labrus_bergylta
ENSPCAG00000002520	LSM10	97	72.881	ENSLACG00000015904	LSM10	91	72.881	Latimeria_chalumnae
ENSPCAG00000002520	LSM10	100	68.852	ENSLOCG00000018277	oscp1a	100	68.852	Lepisosteus_oculatus
ENSPCAG00000002520	LSM10	100	96.694	ENSLAFG00000009600	LSM10	100	96.694	Loxodonta_africana
ENSPCAG00000002520	LSM10	100	91.870	ENSMFAG00000009115	LSM10	100	91.870	Macaca_fascicularis
ENSPCAG00000002520	LSM10	100	91.870	ENSMMUG00000017338	LSM10	100	91.870	Macaca_mulatta
ENSPCAG00000002520	LSM10	100	91.870	ENSMNEG00000020023	LSM10	100	91.870	Macaca_nemestrina
ENSPCAG00000002520	LSM10	100	91.870	ENSMLEG00000025150	LSM10	100	91.870	Mandrillus_leucophaeus
ENSPCAG00000002520	LSM10	100	63.934	ENSMAMG00000004427	oscp1a	100	63.934	Mastacembelus_armatus
ENSPCAG00000002520	LSM10	97	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSPCAG00000002520	LSM10	98	72.269	ENSMGAG00000015707	LSM10	97	72.269	Meleagris_gallopavo
ENSPCAG00000002520	LSM10	97	91.525	ENSMAUG00000016624	Lsm10	97	91.525	Mesocricetus_auratus
ENSPCAG00000002520	LSM10	97	92.373	ENSMOCG00000021943	Lsm10	97	92.373	Microtus_ochrogaster
ENSPCAG00000002520	LSM10	91	66.667	ENSMMOG00000013597	oscp1a	83	66.667	Mola_mola
ENSPCAG00000002520	LSM10	97	82.203	ENSMODG00000023328	LSM10	96	82.203	Monodelphis_domestica
ENSPCAG00000002520	LSM10	58	58.108	ENSMALG00000012661	oscp1a	58	58.108	Monopterus_albus
ENSPCAG00000002520	LSM10	97	91.525	MGP_CAROLIEiJ_G0026467	Lsm10	100	93.548	Mus_caroli
ENSPCAG00000002520	LSM10	97	92.373	ENSMUSG00000050188	Lsm10	100	94.624	Mus_musculus
ENSPCAG00000002520	LSM10	97	92.373	MGP_PahariEiJ_G0028798	Lsm10	100	94.624	Mus_pahari
ENSPCAG00000002520	LSM10	97	92.373	MGP_SPRETEiJ_G0027446	Lsm10	100	94.624	Mus_spretus
ENSPCAG00000002520	LSM10	100	91.870	ENSMPUG00000018593	LSM10	100	91.870	Mustela_putorius_furo
ENSPCAG00000002520	LSM10	97	89.831	ENSMLUG00000023895	LSM10	96	89.831	Myotis_lucifugus
ENSPCAG00000002520	LSM10	100	91.803	ENSNGAG00000015011	Lsm10	99	91.803	Nannospalax_galili
ENSPCAG00000002520	LSM10	97	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSPCAG00000002520	LSM10	100	91.870	ENSNLEG00000033754	LSM10	100	91.870	Nomascus_leucogenys
ENSPCAG00000002520	LSM10	97	82.203	ENSMEUG00000006313	LSM10	96	82.203	Notamacropus_eugenii
ENSPCAG00000002520	LSM10	97	91.525	ENSOPRG00000001699	LSM10	96	91.525	Ochotona_princeps
ENSPCAG00000002520	LSM10	97	94.915	ENSODEG00000019161	LSM10	96	94.915	Octodon_degus
ENSPCAG00000002520	LSM10	97	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSPCAG00000002520	LSM10	97	76.271	ENSOANG00000002066	LSM10	96	76.271	Ornithorhynchus_anatinus
ENSPCAG00000002520	LSM10	97	88.983	ENSOCUG00000005333	LSM10	96	88.983	Oryctolagus_cuniculus
ENSPCAG00000002520	LSM10	97	64.407	ENSORLG00000009504	oscp1a	98	64.407	Oryzias_latipes
ENSPCAG00000002520	LSM10	97	64.407	ENSORLG00020016201	oscp1a	98	64.407	Oryzias_latipes_hni
ENSPCAG00000002520	LSM10	97	66.379	ENSORLG00015007794	oscp1a	97	66.379	Oryzias_latipes_hsok
ENSPCAG00000002520	LSM10	100	91.057	ENSOGAG00000002653	LSM10	100	91.057	Otolemur_garnettii
ENSPCAG00000002520	LSM10	99	90.984	ENSOARG00000009596	LSM10	100	90.984	Ovis_aries
ENSPCAG00000002520	LSM10	100	90.244	ENSPPAG00000023465	LSM10	100	90.244	Pan_paniscus
ENSPCAG00000002520	LSM10	100	91.057	ENSPPRG00000014619	LSM10	100	91.057	Panthera_pardus
ENSPCAG00000002520	LSM10	100	91.057	ENSPTIG00000004613	LSM10	100	91.057	Panthera_tigris_altaica
ENSPCAG00000002520	LSM10	100	90.244	ENSPTRG00000000539	LSM10	100	90.244	Pan_troglodytes
ENSPCAG00000002520	LSM10	100	91.870	ENSPANG00000023172	LSM10	100	91.870	Papio_anubis
ENSPCAG00000002520	LSM10	99	64.463	ENSPKIG00000003728	oscp1a	98	64.463	Paramormyrops_kingsleyae
ENSPCAG00000002520	LSM10	97	72.881	ENSPSIG00000000590	LSM10	96	72.881	Pelodiscus_sinensis
ENSPCAG00000002520	LSM10	63	63.158	ENSPMGG00000015718	oscp1a	99	63.158	Periophthalmus_magnuspinnatus
ENSPCAG00000002520	LSM10	86	83.495	ENSPCIG00000014865	LSM10	76	83.495	Phascolarctos_cinereus
ENSPCAG00000002520	LSM10	93	64.912	ENSPFOG00000020490	oscp1a	97	64.912	Poecilia_formosa
ENSPCAG00000002520	LSM10	96	64.957	ENSPLAG00000016537	oscp1a	89	64.957	Poecilia_latipinna
ENSPCAG00000002520	LSM10	93	66.372	ENSPMEG00000000174	oscp1a	98	66.372	Poecilia_mexicana
ENSPCAG00000002520	LSM10	96	64.957	ENSPREG00000009899	oscp1a	89	64.957	Poecilia_reticulata
ENSPCAG00000002520	LSM10	100	91.057	ENSPPYG00000001539	LSM10	100	91.057	Pongo_abelii
ENSPCAG00000002520	LSM10	97	90.678	ENSPVAG00000008644	LSM10	96	90.678	Pteropus_vampyrus
ENSPCAG00000002520	LSM10	97	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSPCAG00000002520	LSM10	97	64.957	ENSPNAG00000028829	oscp1a	98	64.957	Pygocentrus_nattereri
ENSPCAG00000002520	LSM10	97	93.220	ENSRNOG00000025716	Lsm10	97	93.220	Rattus_norvegicus
ENSPCAG00000002520	LSM10	100	91.870	ENSRBIG00000001561	LSM10	100	91.870	Rhinopithecus_bieti
ENSPCAG00000002520	LSM10	100	91.870	ENSRROG00000011414	LSM10	100	91.870	Rhinopithecus_roxellana
ENSPCAG00000002520	LSM10	100	91.057	ENSSBOG00000036413	-	100	91.057	Saimiri_boliviensis_boliviensis
ENSPCAG00000002520	LSM10	97	81.356	ENSSHAG00000018056	LSM10	96	81.356	Sarcophilus_harrisii
ENSPCAG00000002520	LSM10	98	64.167	ENSSFOG00015019954	lsm10	98	64.167	Scleropages_formosus
ENSPCAG00000002520	LSM10	96	65.812	ENSSMAG00000001297	oscp1a	100	65.812	Scophthalmus_maximus
ENSPCAG00000002520	LSM10	97	63.559	ENSSDUG00000007090	oscp1a	96	63.559	Seriola_dumerili
ENSPCAG00000002520	LSM10	97	64.407	ENSSLDG00000000800	oscp1a	98	64.407	Seriola_lalandi_dorsalis
ENSPCAG00000002520	LSM10	89	94.393	ENSSARG00000004211	LSM10	96	90.000	Sorex_araneus
ENSPCAG00000002520	LSM10	98	65.546	ENSSPAG00000009229	oscp1a	98	65.546	Stegastes_partitus
ENSPCAG00000002520	LSM10	100	90.909	ENSSSCG00000038916	LSM10	100	90.909	Sus_scrofa
ENSPCAG00000002520	LSM10	97	71.186	ENSTGUG00000001600	-	97	71.186	Taeniopygia_guttata
ENSPCAG00000002520	LSM10	97	71.186	ENSTGUG00000001602	-	97	71.186	Taeniopygia_guttata
ENSPCAG00000002520	LSM10	93	67.544	ENSTRUG00000010531	oscp1a	92	67.544	Takifugu_rubripes
ENSPCAG00000002520	LSM10	100	90.244	ENSTBEG00000016674	LSM10	100	90.244	Tupaia_belangeri
ENSPCAG00000002520	LSM10	100	89.431	ENSUAMG00000020265	LSM10	100	89.431	Ursus_americanus
ENSPCAG00000002520	LSM10	100	89.431	ENSUMAG00000001438	LSM10	57	89.431	Ursus_maritimus
ENSPCAG00000002520	LSM10	100	91.870	ENSVVUG00000023209	LSM10	100	91.870	Vulpes_vulpes
ENSPCAG00000002520	LSM10	98	71.795	ENSXETG00000027631	lsm10	97	71.795	Xenopus_tropicalis
ENSPCAG00000002520	LSM10	93	64.602	ENSXCOG00000018776	oscp1a	71	64.602	Xiphophorus_couchianus
ENSPCAG00000002520	LSM10	99	62.903	ENSXMAG00000019963	oscp1a	99	62.903	Xiphophorus_maculatus