EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000002561 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 20677 bases
Position: chrscaffold_3743:20619-41295
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002407	PRP4	PF08799.11	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002550	PRPF4-201	1542	-	ENSPCAP00000002407	514 (aa)	-	UPI00018AF241

Gene Model

Click here to download ENSPCAG00000002561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000002561	PRPF4	57	31.624	ENSPCAG00000013476	WDR5	54	31.624
ENSPCAG00000002561	PRPF4	57	30.000	ENSPCAG00000002118	POC1A	71	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002561	PRPF4	100	99.027	ENSG00000136875	PRPF4	98	99.027	Homo_sapiens
ENSPCAG00000002561	PRPF4	98	77.197	ENSAPOG00000014132	prpf4	98	77.197	Acanthochromis_polyacanthus
ENSPCAG00000002561	PRPF4	99	99.415	ENSAMEG00000013048	PRPF4	96	99.415	Ailuropoda_melanoleuca
ENSPCAG00000002561	PRPF4	98	76.984	ENSACIG00000005579	prpf4	99	76.984	Amphilophus_citrinellus
ENSPCAG00000002561	PRPF4	98	76.634	ENSAOCG00000005457	prpf4	99	76.634	Amphiprion_ocellaris
ENSPCAG00000002561	PRPF4	98	76.436	ENSAPEG00000000776	prpf4	99	76.436	Amphiprion_percula
ENSPCAG00000002561	PRPF4	98	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSPCAG00000002561	PRPF4	100	90.078	ENSAPLG00000006534	PRPF4	96	90.078	Anas_platyrhynchos
ENSPCAG00000002561	PRPF4	99	90.607	ENSACAG00000015110	PRPF4	98	90.607	Anolis_carolinensis
ENSPCAG00000002561	PRPF4	99	99.415	ENSANAG00000022464	PRPF4	94	99.415	Aotus_nancymaae
ENSPCAG00000002561	PRPF4	98	76.786	ENSACLG00000019031	prpf4	99	76.786	Astatotilapia_calliptera
ENSPCAG00000002561	PRPF4	98	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSPCAG00000002561	PRPF4	99	98.830	ENSBTAG00000004571	PRPF4	98	98.830	Bos_taurus
ENSPCAG00000002561	PRPF4	92	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSPCAG00000002561	PRPF4	100	99.416	ENSCJAG00000017856	PRPF4	98	99.416	Callithrix_jacchus
ENSPCAG00000002561	PRPF4	99	99.415	ENSCAFG00000003224	PRPF4	95	99.415	Canis_familiaris
ENSPCAG00000002561	PRPF4	100	99.222	ENSCAFG00020022637	PRPF4	99	99.222	Canis_lupus_dingo
ENSPCAG00000002561	PRPF4	100	99.027	ENSCHIG00000024648	-	98	99.027	Capra_hircus
ENSPCAG00000002561	PRPF4	99	99.220	ENSTSYG00000010366	PRPF4	98	99.220	Carlito_syrichta
ENSPCAG00000002561	PRPF4	88	89.294	ENSCAPG00000008935	PRPF4	97	88.067	Cavia_aperea
ENSPCAG00000002561	PRPF4	99	98.635	ENSCPOG00000010747	-	98	98.635	Cavia_porcellus
ENSPCAG00000002561	PRPF4	99	92.203	ENSCPOG00000014729	-	98	92.203	Cavia_porcellus
ENSPCAG00000002561	PRPF4	99	99.220	ENSCCAG00000028990	PRPF4	98	99.220	Cebus_capucinus
ENSPCAG00000002561	PRPF4	99	99.220	ENSCATG00000021552	PRPF4	98	99.220	Cercocebus_atys
ENSPCAG00000002561	PRPF4	99	98.830	ENSCLAG00000013448	PRPF4	98	98.830	Chinchilla_lanigera
ENSPCAG00000002561	PRPF4	88	95.575	ENSCHOG00000007233	PRPF4	100	95.575	Choloepus_hoffmanni
ENSPCAG00000002561	PRPF4	100	91.051	ENSCPBG00000019136	PRPF4	74	91.051	Chrysemys_picta_bellii
ENSPCAG00000002561	PRPF4	98	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSPCAG00000002561	PRPF4	97	57.341	ENSCSAVG00000009178	-	99	58.658	Ciona_savignyi
ENSPCAG00000002561	PRPF4	99	99.415	ENSCANG00000003246	PRPF4	98	99.415	Colobus_angolensis_palliatus
ENSPCAG00000002561	PRPF4	99	99.025	ENSCGRG00001016992	Prpf4	98	99.025	Cricetulus_griseus_chok1gshd
ENSPCAG00000002561	PRPF4	99	99.025	ENSCGRG00000017560	Prpf4	98	99.025	Cricetulus_griseus_crigri
ENSPCAG00000002561	PRPF4	98	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSPCAG00000002561	PRPF4	98	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSPCAG00000002561	PRPF4	99	99.025	ENSDNOG00000013203	PRPF4	98	99.025	Dasypus_novemcinctus
ENSPCAG00000002561	PRPF4	99	99.025	ENSDORG00000026275	Prpf4	98	99.025	Dipodomys_ordii
ENSPCAG00000002561	PRPF4	88	56.455	FBgn0036733	U4-U6-60K	99	50.365	Drosophila_melanogaster
ENSPCAG00000002561	PRPF4	100	97.665	ENSETEG00000020389	PRPF4	98	97.665	Echinops_telfairi
ENSPCAG00000002561	PRPF4	97	72.581	ENSEBUG00000015229	prpf4	86	73.041	Eptatretus_burgeri
ENSPCAG00000002561	PRPF4	99	99.415	ENSEASG00005022678	PRPF4	98	99.415	Equus_asinus_asinus
ENSPCAG00000002561	PRPF4	99	99.415	ENSECAG00000007072	PRPF4	98	99.415	Equus_caballus
ENSPCAG00000002561	PRPF4	100	78.000	ENSEEUG00000007480	PRPF4	98	78.000	Erinaceus_europaeus
ENSPCAG00000002561	PRPF4	98	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSPCAG00000002561	PRPF4	100	99.416	ENSFCAG00000005514	PRPF4	98	99.416	Felis_catus
ENSPCAG00000002561	PRPF4	99	87.865	ENSFALG00000005423	PRPF4	86	87.865	Ficedula_albicollis
ENSPCAG00000002561	PRPF4	99	98.635	ENSFDAG00000005839	PRPF4	98	98.635	Fukomys_damarensis
ENSPCAG00000002561	PRPF4	98	75.794	ENSFHEG00000001300	prpf4	99	75.794	Fundulus_heteroclitus
ENSPCAG00000002561	PRPF4	99	89.980	ENSGALG00000008857	PRPF4	95	89.980	Gallus_gallus
ENSPCAG00000002561	PRPF4	62	73.292	ENSGAFG00000012164	prpf4	66	73.292	Gambusia_affinis
ENSPCAG00000002561	PRPF4	97	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSPCAG00000002561	PRPF4	100	90.856	ENSGAGG00000025029	PRPF4	95	90.856	Gopherus_agassizii
ENSPCAG00000002561	PRPF4	99	99.025	ENSGGOG00000006943	PRPF4	98	99.025	Gorilla_gorilla
ENSPCAG00000002561	PRPF4	98	76.587	ENSHBUG00000000562	prpf4	99	76.587	Haplochromis_burtoni
ENSPCAG00000002561	PRPF4	99	81.409	ENSHGLG00000016628	-	97	82.192	Heterocephalus_glaber_female
ENSPCAG00000002561	PRPF4	99	79.922	ENSHGLG00000003838	-	98	79.922	Heterocephalus_glaber_female
ENSPCAG00000002561	PRPF4	99	98.635	ENSHGLG00000015191	PRPF4	98	98.635	Heterocephalus_glaber_female
ENSPCAG00000002561	PRPF4	99	79.922	ENSHGLG00100005571	-	98	79.922	Heterocephalus_glaber_male
ENSPCAG00000002561	PRPF4	98	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSPCAG00000002561	PRPF4	99	99.411	ENSSTOG00000027833	PRPF4	98	99.411	Ictidomys_tridecemlineatus
ENSPCAG00000002561	PRPF4	99	99.025	ENSJJAG00000008838	Prpf4	98	99.025	Jaculus_jaculus
ENSPCAG00000002561	PRPF4	98	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSPCAG00000002561	PRPF4	98	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSPCAG00000002561	PRPF4	99	80.934	ENSLACG00000016317	PRPF4	98	80.934	Latimeria_chalumnae
ENSPCAG00000002561	PRPF4	98	81.980	ENSLOCG00000000581	prpf4	99	81.980	Lepisosteus_oculatus
ENSPCAG00000002561	PRPF4	99	99.415	ENSLAFG00000018225	PRPF4	98	99.415	Loxodonta_africana
ENSPCAG00000002561	PRPF4	99	99.025	ENSMFAG00000039397	PRPF4	98	99.025	Macaca_fascicularis
ENSPCAG00000002561	PRPF4	99	99.220	ENSMMUG00000005844	PRPF4	98	99.220	Macaca_mulatta
ENSPCAG00000002561	PRPF4	98	88.933	ENSMNEG00000033737	PRPF4	98	88.694	Macaca_nemestrina
ENSPCAG00000002561	PRPF4	99	99.220	ENSMLEG00000040284	PRPF4	98	99.220	Mandrillus_leucophaeus
ENSPCAG00000002561	PRPF4	98	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSPCAG00000002561	PRPF4	98	76.786	ENSMZEG00005023205	prpf4	99	76.786	Maylandia_zebra
ENSPCAG00000002561	PRPF4	99	89.391	ENSMGAG00000001796	PRPF4	95	89.391	Meleagris_gallopavo
ENSPCAG00000002561	PRPF4	99	98.625	ENSMAUG00000018022	Prpf4	98	98.625	Mesocricetus_auratus
ENSPCAG00000002561	PRPF4	100	98.249	ENSMICG00000015022	PRPF4	98	98.249	Microcebus_murinus
ENSPCAG00000002561	PRPF4	99	98.441	ENSMOCG00000018273	Prpf4	98	98.441	Microtus_ochrogaster
ENSPCAG00000002561	PRPF4	98	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSPCAG00000002561	PRPF4	99	95.331	ENSMODG00000004444	-	98	95.331	Monodelphis_domestica
ENSPCAG00000002561	PRPF4	99	94.942	ENSMODG00000025096	-	95	94.942	Monodelphis_domestica
ENSPCAG00000002561	PRPF4	98	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSPCAG00000002561	PRPF4	99	98.633	MGP_CAROLIEiJ_G0026078	Prpf4	98	98.633	Mus_caroli
ENSPCAG00000002561	PRPF4	99	98.633	ENSMUSG00000066148	Prpf4	98	98.633	Mus_musculus
ENSPCAG00000002561	PRPF4	99	98.438	MGP_PahariEiJ_G0028413	Prpf4	98	98.438	Mus_pahari
ENSPCAG00000002561	PRPF4	99	98.633	MGP_SPRETEiJ_G0027042	Prpf4	98	98.633	Mus_spretus
ENSPCAG00000002561	PRPF4	99	99.415	ENSMPUG00000007883	PRPF4	98	99.415	Mustela_putorius_furo
ENSPCAG00000002561	PRPF4	99	97.271	ENSMLUG00000008626	-	96	97.271	Myotis_lucifugus
ENSPCAG00000002561	PRPF4	99	99.025	ENSMLUG00000015309	-	95	99.025	Myotis_lucifugus
ENSPCAG00000002561	PRPF4	99	93.567	ENSNGAG00000000468	Prpf4	98	93.567	Nannospalax_galili
ENSPCAG00000002561	PRPF4	98	76.984	ENSNBRG00000007972	prpf4	99	76.984	Neolamprologus_brichardi
ENSPCAG00000002561	PRPF4	99	99.415	ENSNLEG00000016647	PRPF4	98	99.415	Nomascus_leucogenys
ENSPCAG00000002561	PRPF4	99	95.331	ENSMEUG00000013256	PRPF4	100	95.331	Notamacropus_eugenii
ENSPCAG00000002561	PRPF4	100	98.638	ENSOPRG00000005302	PRPF4	98	98.638	Ochotona_princeps
ENSPCAG00000002561	PRPF4	99	99.025	ENSODEG00000018147	PRPF4	98	99.025	Octodon_degus
ENSPCAG00000002561	PRPF4	98	76.786	ENSONIG00000012671	prpf4	99	76.786	Oreochromis_niloticus
ENSPCAG00000002561	PRPF4	99	99.220	ENSOCUG00000005046	PRPF4	98	99.220	Oryctolagus_cuniculus
ENSPCAG00000002561	PRPF4	98	74.701	ENSORLG00000019641	prpf4	99	74.701	Oryzias_latipes
ENSPCAG00000002561	PRPF4	98	74.701	ENSORLG00020019438	prpf4	99	74.701	Oryzias_latipes_hni
ENSPCAG00000002561	PRPF4	98	74.947	ENSOMEG00000020941	prpf4	99	74.947	Oryzias_melastigma
ENSPCAG00000002561	PRPF4	99	94.542	ENSOGAG00000007802	PRPF4	96	94.542	Otolemur_garnettii
ENSPCAG00000002561	PRPF4	99	99.025	ENSOARG00000006319	PRPF4	95	99.025	Ovis_aries
ENSPCAG00000002561	PRPF4	99	99.025	ENSPPAG00000041797	PRPF4	98	99.025	Pan_paniscus
ENSPCAG00000002561	PRPF4	99	99.415	ENSPPRG00000014360	PRPF4	98	99.415	Panthera_pardus
ENSPCAG00000002561	PRPF4	99	99.415	ENSPTIG00000009574	PRPF4	98	99.415	Panthera_tigris_altaica
ENSPCAG00000002561	PRPF4	100	99.027	ENSPTRG00000021274	PRPF4	98	99.027	Pan_troglodytes
ENSPCAG00000002561	PRPF4	99	99.025	ENSPANG00000025776	PRPF4	94	99.025	Papio_anubis
ENSPCAG00000002561	PRPF4	98	81.386	ENSPKIG00000017259	prpf4	99	81.386	Paramormyrops_kingsleyae
ENSPCAG00000002561	PRPF4	100	91.051	ENSPSIG00000010713	PRPF4	90	91.051	Pelodiscus_sinensis
ENSPCAG00000002561	PRPF4	98	59.252	ENSPMGG00000000997	prpf4	98	59.252	Periophthalmus_magnuspinnatus
ENSPCAG00000002561	PRPF4	99	99.025	ENSPEMG00000024115	Prpf4	98	99.025	Peromyscus_maniculatus_bairdii
ENSPCAG00000002561	PRPF4	99	95.331	ENSPCIG00000003821	PRPF4	99	95.331	Phascolarctos_cinereus
ENSPCAG00000002561	PRPF4	97	70.217	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSPCAG00000002561	PRPF4	85	70.149	ENSPLAG00000011620	prpf4	96	71.739	Poecilia_latipinna
ENSPCAG00000002561	PRPF4	93	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSPCAG00000002561	PRPF4	99	99.411	ENSPCOG00000011975	PRPF4	98	99.411	Propithecus_coquereli
ENSPCAG00000002561	PRPF4	100	95.720	ENSPVAG00000004708	PRPF4	98	95.720	Pteropus_vampyrus
ENSPCAG00000002561	PRPF4	98	76.786	ENSPNYG00000008013	prpf4	99	76.786	Pundamilia_nyererei
ENSPCAG00000002561	PRPF4	98	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSPCAG00000002561	PRPF4	99	98.438	ENSRNOG00000014777	Prpf4	98	98.438	Rattus_norvegicus
ENSPCAG00000002561	PRPF4	99	99.415	ENSRBIG00000040221	PRPF4	98	99.415	Rhinopithecus_bieti
ENSPCAG00000002561	PRPF4	99	99.415	ENSRROG00000040240	PRPF4	98	99.415	Rhinopithecus_roxellana
ENSPCAG00000002561	PRPF4	99	95.525	ENSSHAG00000017658	PRPF4	98	95.525	Sarcophilus_harrisii
ENSPCAG00000002561	PRPF4	98	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSPCAG00000002561	PRPF4	98	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSPCAG00000002561	PRPF4	98	73.307	ENSSDUG00000022083	prpf4	98	73.506	Seriola_dumerili
ENSPCAG00000002561	PRPF4	98	73.506	ENSSLDG00000008115	prpf4	98	73.705	Seriola_lalandi_dorsalis
ENSPCAG00000002561	PRPF4	99	91.159	ENSSPUG00000015582	PRPF4	98	91.159	Sphenodon_punctatus
ENSPCAG00000002561	PRPF4	98	71.006	ENSSPAG00000011286	prpf4	99	71.006	Stegastes_partitus
ENSPCAG00000002561	PRPF4	99	99.415	ENSSSCG00000024648	PRPF4	98	99.415	Sus_scrofa
ENSPCAG00000002561	PRPF4	96	90.061	ENSTGUG00000002623	PRPF4	100	90.389	Taeniopygia_guttata
ENSPCAG00000002561	PRPF4	98	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSPCAG00000002561	PRPF4	98	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSPCAG00000002561	PRPF4	100	90.272	ENSTBEG00000000821	PRPF4	98	90.272	Tupaia_belangeri
ENSPCAG00000002561	PRPF4	83	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSPCAG00000002561	PRPF4	63	96.626	ENSUAMG00000018288	PRPF4	88	96.626	Ursus_americanus
ENSPCAG00000002561	PRPF4	99	98.830	ENSUMAG00000019375	PRPF4	98	98.830	Ursus_maritimus
ENSPCAG00000002561	PRPF4	100	98.833	ENSVPAG00000005281	PRPF4	98	98.833	Vicugna_pacos
ENSPCAG00000002561	PRPF4	99	98.259	ENSVVUG00000002476	PRPF4	100	98.028	Vulpes_vulpes
ENSPCAG00000002561	PRPF4	70	57.500	ENSXCOG00000006101	prpf4	93	59.158	Xiphophorus_couchianus
ENSPCAG00000002561	PRPF4	89	63.974	ENSXMAG00000002750	prpf4	98	65.010	Xiphophorus_maculatus