EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002623 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 56821 bases
Position: chrGeneScaffold_4779:95642-152462
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002527	CPSF_A	PF03178.15	8.6e-95	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002678	SF3B3-201	3651	-	ENSPCAP00000002527	1216 (aa)	-	UPI00018B03A9

Gene Model

Click here to download ENSPCAG00000002623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002623	SF3B3	100	78.225	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSPCAG00000002623	SF3B3	96	72.161	ENSAPOG00000006172	sf3b3	98	72.161	Acanthochromis_polyacanthus
ENSPCAG00000002623	SF3B3	100	78.115	ENSAMEG00000002187	SF3B3	100	78.115	Ailuropoda_melanoleuca
ENSPCAG00000002623	SF3B3	92	70.982	ENSACIG00000016487	sf3b3	100	70.982	Amphilophus_citrinellus
ENSPCAG00000002623	SF3B3	100	72.884	ENSAOCG00000007158	sf3b3	100	72.884	Amphiprion_ocellaris
ENSPCAG00000002623	SF3B3	100	72.884	ENSAPEG00000022786	sf3b3	100	72.884	Amphiprion_percula
ENSPCAG00000002623	SF3B3	100	72.720	ENSATEG00000013708	sf3b3	100	72.720	Anabas_testudineus
ENSPCAG00000002623	SF3B3	81	74.772	ENSAPLG00000004996	SF3B3	100	74.772	Anas_platyrhynchos
ENSPCAG00000002623	SF3B3	100	77.075	ENSACAG00000001817	SF3B3	100	77.075	Anolis_carolinensis
ENSPCAG00000002623	SF3B3	100	78.225	ENSANAG00000028001	SF3B3	99	89.172	Aotus_nancymaae
ENSPCAG00000002623	SF3B3	96	71.819	ENSACLG00000022555	sf3b3	100	70.893	Astatotilapia_calliptera
ENSPCAG00000002623	SF3B3	100	72.638	ENSAMXG00000003410	sf3b3	100	72.638	Astyanax_mexicanus
ENSPCAG00000002623	SF3B3	100	78.225	ENSBTAG00000010627	SF3B3	100	78.225	Bos_taurus
ENSPCAG00000002623	SF3B3	95	56.742	WBGene00019323	teg-4	95	56.742	Caenorhabditis_elegans
ENSPCAG00000002623	SF3B3	100	78.225	ENSCJAG00000014773	SF3B3	99	78.225	Callithrix_jacchus
ENSPCAG00000002623	SF3B3	100	78.307	ENSCAFG00000020151	SF3B3	100	78.307	Canis_familiaris
ENSPCAG00000002623	SF3B3	100	78.307	ENSCAFG00020020912	SF3B3	100	78.307	Canis_lupus_dingo
ENSPCAG00000002623	SF3B3	100	78.307	ENSCHIG00000019822	SF3B3	100	78.307	Capra_hircus
ENSPCAG00000002623	SF3B3	100	78.225	ENSTSYG00000007910	SF3B3	100	78.225	Carlito_syrichta
ENSPCAG00000002623	SF3B3	65	97.619	ENSCAPG00000001484	SF3B3	79	97.619	Cavia_aperea
ENSPCAG00000002623	SF3B3	96	84.370	ENSCPOG00000000586	SF3B3	96	84.370	Cavia_porcellus
ENSPCAG00000002623	SF3B3	100	78.225	ENSCCAG00000017736	SF3B3	100	78.225	Cebus_capucinus
ENSPCAG00000002623	SF3B3	100	78.225	ENSCATG00000036562	SF3B3	97	89.172	Cercocebus_atys
ENSPCAG00000002623	SF3B3	94	84.370	ENSCLAG00000003921	SF3B3	96	84.370	Chinchilla_lanigera
ENSPCAG00000002623	SF3B3	100	78.143	ENSCSAG00000004371	SF3B3	100	78.143	Chlorocebus_sabaeus
ENSPCAG00000002623	SF3B3	75	100.000	ENSCHOG00000001878	SF3B3	75	100.000	Choloepus_hoffmanni
ENSPCAG00000002623	SF3B3	100	77.403	ENSCPBG00000015853	SF3B3	100	77.403	Chrysemys_picta_bellii
ENSPCAG00000002623	SF3B3	100	63.629	ENSCING00000001342	-	100	63.629	Ciona_intestinalis
ENSPCAG00000002623	SF3B3	88	83.122	ENSCSAVG00000011454	-	90	83.122	Ciona_savignyi
ENSPCAG00000002623	SF3B3	93	100.000	ENSCANG00000042920	SF3B3	95	100.000	Colobus_angolensis_palliatus
ENSPCAG00000002623	SF3B3	100	78.143	ENSCGRG00001015908	Sf3b3	100	78.143	Cricetulus_griseus_chok1gshd
ENSPCAG00000002623	SF3B3	93	91.162	ENSCGRG00000010180	Sf3b3	95	91.162	Cricetulus_griseus_crigri
ENSPCAG00000002623	SF3B3	82	70.858	ENSCSEG00000014192	sf3b3	99	70.858	Cynoglossus_semilaevis
ENSPCAG00000002623	SF3B3	100	71.980	ENSCVAG00000010459	sf3b3	100	71.980	Cyprinodon_variegatus
ENSPCAG00000002623	SF3B3	100	72.638	ENSDARG00000103553	sf3b3	100	72.638	Danio_rerio
ENSPCAG00000002623	SF3B3	85	74.542	ENSDNOG00000043626	SF3B3	100	74.542	Dasypus_novemcinctus
ENSPCAG00000002623	SF3B3	100	78.225	ENSDORG00000014176	Sf3b3	100	78.225	Dipodomys_ordii
ENSPCAG00000002623	SF3B3	100	58.028	FBgn0035162	Sf3b3	100	58.028	Drosophila_melanogaster
ENSPCAG00000002623	SF3B3	73	100.000	ENSETEG00000002729	SF3B3	72	100.000	Echinops_telfairi
ENSPCAG00000002623	SF3B3	91	79.264	ENSEBUG00000006117	sf3b3	92	79.264	Eptatretus_burgeri
ENSPCAG00000002623	SF3B3	100	78.307	ENSEASG00005013376	SF3B3	100	78.307	Equus_asinus_asinus
ENSPCAG00000002623	SF3B3	100	78.307	ENSECAG00000014053	SF3B3	100	78.307	Equus_caballus
ENSPCAG00000002623	SF3B3	93	83.393	ENSEEUG00000015611	SF3B3	93	83.393	Erinaceus_europaeus
ENSPCAG00000002623	SF3B3	100	72.391	ENSELUG00000015417	sf3b3	100	72.391	Esox_lucius
ENSPCAG00000002623	SF3B3	100	78.307	ENSFCAG00000009487	SF3B3	100	78.307	Felis_catus
ENSPCAG00000002623	SF3B3	100	77.403	ENSFALG00000007372	SF3B3	100	77.403	Ficedula_albicollis
ENSPCAG00000002623	SF3B3	100	78.143	ENSFDAG00000002608	SF3B3	100	78.143	Fukomys_damarensis
ENSPCAG00000002623	SF3B3	100	72.391	ENSFHEG00000017824	sf3b3	100	72.391	Fundulus_heteroclitus
ENSPCAG00000002623	SF3B3	93	77.746	ENSGMOG00000008139	sf3b3	93	77.746	Gadus_morhua
ENSPCAG00000002623	SF3B3	100	77.486	ENSGALG00000002531	SF3B3	100	77.486	Gallus_gallus
ENSPCAG00000002623	SF3B3	100	71.980	ENSGAFG00000015206	sf3b3	100	71.980	Gambusia_affinis
ENSPCAG00000002623	SF3B3	100	72.496	ENSGACG00000002646	sf3b3	100	72.496	Gasterosteus_aculeatus
ENSPCAG00000002623	SF3B3	96	76.601	ENSGAGG00000006746	SF3B3	97	76.601	Gopherus_agassizii
ENSPCAG00000002623	SF3B3	100	78.225	ENSGGOG00000003246	SF3B3	99	89.172	Gorilla_gorilla
ENSPCAG00000002623	SF3B3	92	69.375	ENSHBUG00000005960	sf3b3	100	69.375	Haplochromis_burtoni
ENSPCAG00000002623	SF3B3	100	78.225	ENSHGLG00000010135	SF3B3	100	78.225	Heterocephalus_glaber_female
ENSPCAG00000002623	SF3B3	100	76.561	ENSHGLG00100011148	SF3B3	100	76.561	Heterocephalus_glaber_male
ENSPCAG00000002623	SF3B3	100	71.980	ENSHCOG00000011981	sf3b3	100	71.980	Hippocampus_comes
ENSPCAG00000002623	SF3B3	100	72.720	ENSIPUG00000020435	sf3b3	100	72.720	Ictalurus_punctatus
ENSPCAG00000002623	SF3B3	100	78.225	ENSSTOG00000007065	SF3B3	100	78.225	Ictidomys_tridecemlineatus
ENSPCAG00000002623	SF3B3	100	78.225	ENSJJAG00000003948	Sf3b3	100	78.225	Jaculus_jaculus
ENSPCAG00000002623	SF3B3	91	82.943	ENSKMAG00000004066	sf3b3	91	82.943	Kryptolebias_marmoratus
ENSPCAG00000002623	SF3B3	100	72.145	ENSLBEG00000018302	sf3b3	100	72.145	Labrus_bergylta
ENSPCAG00000002623	SF3B3	98	70.930	ENSLACG00000012501	SF3B3	99	70.930	Latimeria_chalumnae
ENSPCAG00000002623	SF3B3	100	73.481	ENSLOCG00000007566	sf3b3	100	73.481	Lepisosteus_oculatus
ENSPCAG00000002623	SF3B3	100	78.307	ENSLAFG00000012219	SF3B3	100	78.307	Loxodonta_africana
ENSPCAG00000002623	SF3B3	100	78.225	ENSMFAG00000045487	SF3B3	97	89.172	Macaca_fascicularis
ENSPCAG00000002623	SF3B3	100	78.225	ENSMMUG00000017812	SF3B3	100	78.225	Macaca_mulatta
ENSPCAG00000002623	SF3B3	100	78.225	ENSMNEG00000033385	SF3B3	100	78.225	Macaca_nemestrina
ENSPCAG00000002623	SF3B3	93	99.474	ENSMLEG00000043891	SF3B3	95	99.474	Mandrillus_leucophaeus
ENSPCAG00000002623	SF3B3	100	73.048	ENSMAMG00000016837	sf3b3	100	73.048	Mastacembelus_armatus
ENSPCAG00000002623	SF3B3	100	72.555	ENSMZEG00005010836	sf3b3	100	72.555	Maylandia_zebra
ENSPCAG00000002623	SF3B3	89	69.935	ENSMZEG00005026015	sf3b3	99	69.935	Maylandia_zebra
ENSPCAG00000002623	SF3B3	100	77.486	ENSMGAG00000001597	SF3B3	100	77.486	Meleagris_gallopavo
ENSPCAG00000002623	SF3B3	56	100.000	ENSMAUG00000013618	Sf3b3	74	100.000	Mesocricetus_auratus
ENSPCAG00000002623	SF3B3	95	81.948	ENSMICG00000001363	SF3B3	95	81.948	Microcebus_murinus
ENSPCAG00000002623	SF3B3	100	78.143	ENSMOCG00000006108	Sf3b3	100	78.143	Microtus_ochrogaster
ENSPCAG00000002623	SF3B3	89	70.028	ENSMMOG00000002598	sf3b3	97	70.028	Mola_mola
ENSPCAG00000002623	SF3B3	100	73.974	ENSMODG00000014363	SF3B3	100	73.974	Monodelphis_domestica
ENSPCAG00000002623	SF3B3	100	72.555	ENSMALG00000008014	sf3b3	100	72.555	Monopterus_albus
ENSPCAG00000002623	SF3B3	100	78.061	MGP_CAROLIEiJ_G0031563	Sf3b3	100	78.061	Mus_caroli
ENSPCAG00000002623	SF3B3	100	78.143	ENSMUSG00000033732	Sf3b3	100	78.143	Mus_musculus
ENSPCAG00000002623	SF3B3	100	78.061	MGP_SPRETEiJ_G0032681	Sf3b3	100	78.061	Mus_spretus
ENSPCAG00000002623	SF3B3	100	78.307	ENSMPUG00000010277	SF3B3	100	78.307	Mustela_putorius_furo
ENSPCAG00000002623	SF3B3	100	78.061	ENSMLUG00000014607	SF3B3	100	78.061	Myotis_lucifugus
ENSPCAG00000002623	SF3B3	100	78.225	ENSNGAG00000021903	Sf3b3	100	78.225	Nannospalax_galili
ENSPCAG00000002623	SF3B3	80	97.222	ENSNBRG00000007197	sf3b3	95	97.222	Neolamprologus_brichardi
ENSPCAG00000002623	SF3B3	100	76.765	ENSNLEG00000016127	SF3B3	99	89.172	Nomascus_leucogenys
ENSPCAG00000002623	SF3B3	92	90.501	ENSMEUG00000004479	SF3B3	94	90.501	Notamacropus_eugenii
ENSPCAG00000002623	SF3B3	98	80.889	ENSOPRG00000009847	SF3B3	100	80.889	Ochotona_princeps
ENSPCAG00000002623	SF3B3	100	78.143	ENSODEG00000014154	SF3B3	100	78.143	Octodon_degus
ENSPCAG00000002623	SF3B3	100	72.802	ENSONIG00000011198	sf3b3	100	72.802	Oreochromis_niloticus
ENSPCAG00000002623	SF3B3	100	78.061	ENSOANG00000001161	-	100	78.061	Ornithorhynchus_anatinus
ENSPCAG00000002623	SF3B3	100	79.047	ENSOCUG00000004139	SF3B3	100	79.047	Oryctolagus_cuniculus
ENSPCAG00000002623	SF3B3	100	72.638	ENSORLG00000013472	sf3b3	100	72.638	Oryzias_latipes
ENSPCAG00000002623	SF3B3	100	72.638	ENSORLG00020017473	sf3b3	100	72.638	Oryzias_latipes_hni
ENSPCAG00000002623	SF3B3	100	72.555	ENSORLG00015007710	sf3b3	100	72.555	Oryzias_latipes_hsok
ENSPCAG00000002623	SF3B3	100	72.227	ENSOMEG00000014483	sf3b3	100	72.227	Oryzias_melastigma
ENSPCAG00000002623	SF3B3	100	77.869	ENSOGAG00000016051	SF3B3	100	77.869	Otolemur_garnettii
ENSPCAG00000002623	SF3B3	100	78.115	ENSOARG00000004816	SF3B3	100	78.115	Ovis_aries
ENSPCAG00000002623	SF3B3	100	78.225	ENSPPAG00000026807	SF3B3	99	89.172	Pan_paniscus
ENSPCAG00000002623	SF3B3	100	78.307	ENSPPRG00000001686	SF3B3	100	78.307	Panthera_pardus
ENSPCAG00000002623	SF3B3	89	75.713	ENSPTIG00000020382	SF3B3	100	75.713	Panthera_tigris_altaica
ENSPCAG00000002623	SF3B3	100	78.225	ENSPTRG00000008308	SF3B3	99	89.172	Pan_troglodytes
ENSPCAG00000002623	SF3B3	100	78.225	ENSPANG00000024075	SF3B3	100	78.225	Papio_anubis
ENSPCAG00000002623	SF3B3	100	72.309	ENSPKIG00000002712	sf3b3	100	72.309	Paramormyrops_kingsleyae
ENSPCAG00000002623	SF3B3	89	74.977	ENSPSIG00000002232	SF3B3	100	74.977	Pelodiscus_sinensis
ENSPCAG00000002623	SF3B3	100	78.143	ENSPEMG00000008603	Sf3b3	100	78.143	Peromyscus_maniculatus_bairdii
ENSPCAG00000002623	SF3B3	100	71.487	ENSPMAG00000001793	sf3b3	100	71.487	Petromyzon_marinus
ENSPCAG00000002623	SF3B3	100	78.061	ENSPCIG00000014927	SF3B3	100	78.061	Phascolarctos_cinereus
ENSPCAG00000002623	SF3B3	100	72.062	ENSPFOG00000015516	sf3b3	100	72.062	Poecilia_formosa
ENSPCAG00000002623	SF3B3	100	72.062	ENSPLAG00000014330	sf3b3	100	72.062	Poecilia_latipinna
ENSPCAG00000002623	SF3B3	100	72.145	ENSPMEG00000019856	sf3b3	100	72.145	Poecilia_mexicana
ENSPCAG00000002623	SF3B3	81	71.240	ENSPREG00000019669	sf3b3	97	71.240	Poecilia_reticulata
ENSPCAG00000002623	SF3B3	95	99.254	ENSPPYG00000007539	SF3B3	100	99.254	Pongo_abelii
ENSPCAG00000002623	SF3B3	82	100.000	ENSPCOG00000026582	SF3B3	98	100.000	Propithecus_coquereli
ENSPCAG00000002623	SF3B3	100	78.225	ENSPVAG00000000684	SF3B3	100	78.225	Pteropus_vampyrus
ENSPCAG00000002623	SF3B3	100	72.638	ENSPNYG00000003528	sf3b3	100	72.638	Pundamilia_nyererei
ENSPCAG00000002623	SF3B3	100	72.884	ENSPNAG00000015419	sf3b3	100	72.884	Pygocentrus_nattereri
ENSPCAG00000002623	SF3B3	100	78.143	ENSRNOG00000017724	Sf3b3	100	78.143	Rattus_norvegicus
ENSPCAG00000002623	SF3B3	100	78.225	ENSRBIG00000021904	SF3B3	100	78.225	Rhinopithecus_bieti
ENSPCAG00000002623	SF3B3	100	78.225	ENSRROG00000045703	SF3B3	97	89.172	Rhinopithecus_roxellana
ENSPCAG00000002623	SF3B3	67	41.935	YML049C	-	67	41.935	Saccharomyces_cerevisiae
ENSPCAG00000002623	SF3B3	100	78.225	ENSSBOG00000029156	SF3B3	99	89.172	Saimiri_boliviensis_boliviensis
ENSPCAG00000002623	SF3B3	100	78.061	ENSSHAG00000000372	SF3B3	100	78.061	Sarcophilus_harrisii
ENSPCAG00000002623	SF3B3	100	73.213	ENSSFOG00015012877	sf3b3	100	73.213	Scleropages_formosus
ENSPCAG00000002623	SF3B3	100	72.391	ENSSMAG00000014386	sf3b3	100	72.391	Scophthalmus_maximus
ENSPCAG00000002623	SF3B3	100	73.048	ENSSDUG00000021201	sf3b3	100	73.048	Seriola_dumerili
ENSPCAG00000002623	SF3B3	100	72.966	ENSSLDG00000017532	sf3b3	100	72.966	Seriola_lalandi_dorsalis
ENSPCAG00000002623	SF3B3	90	100.000	ENSSARG00000006917	SF3B3	90	100.000	Sorex_araneus
ENSPCAG00000002623	SF3B3	100	77.403	ENSSPUG00000006253	SF3B3	100	77.403	Sphenodon_punctatus
ENSPCAG00000002623	SF3B3	92	74.589	ENSSPAG00000003125	sf3b3	94	74.589	Stegastes_partitus
ENSPCAG00000002623	SF3B3	100	78.307	ENSSSCG00000025323	SF3B3	100	78.307	Sus_scrofa
ENSPCAG00000002623	SF3B3	100	77.586	ENSTGUG00000006082	SF3B3	100	77.586	Taeniopygia_guttata
ENSPCAG00000002623	SF3B3	87	72.417	ENSTNIG00000004857	sf3b3	97	72.417	Tetraodon_nigroviridis
ENSPCAG00000002623	SF3B3	86	80.368	ENSTBEG00000002946	SF3B3	93	80.368	Tupaia_belangeri
ENSPCAG00000002623	SF3B3	100	77.896	ENSTTRG00000005855	SF3B3	100	77.896	Tursiops_truncatus
ENSPCAG00000002623	SF3B3	100	78.307	ENSUAMG00000006780	SF3B3	100	78.307	Ursus_americanus
ENSPCAG00000002623	SF3B3	100	78.307	ENSUMAG00000017757	SF3B3	100	78.307	Ursus_maritimus
ENSPCAG00000002623	SF3B3	100	80.444	ENSVPAG00000003202	SF3B3	100	80.444	Vicugna_pacos
ENSPCAG00000002623	SF3B3	100	78.225	ENSVVUG00000017922	SF3B3	100	78.225	Vulpes_vulpes
ENSPCAG00000002623	SF3B3	100	75.596	ENSXETG00000032869	SF3B3	100	75.596	Xenopus_tropicalis
ENSPCAG00000002623	SF3B3	77	70.913	ENSXCOG00000013628	sf3b3	97	70.913	Xiphophorus_couchianus
ENSPCAG00000002623	SF3B3	100	72.145	ENSXMAG00000006334	sf3b3	100	72.145	Xiphophorus_maculatus