EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000002630 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 226133 bases
Position: chrGeneScaffold_765:12426-238558
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002481	Fox-1_C	PF12414.8	4.2e-41	1	1
ENSPCAP00000002481	RRM_1	PF00076.22	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002626	RBFOX1-201	1134	-	ENSPCAP00000002481	378 (aa)	-	UPI00018B0901

Gene Model

Click here to download ENSPCAG00000002630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000002630	RBFOX1	86	53.887	ENSPCAG00000001401	RBFOX3	100	55.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002630	RBFOX1	100	89.418	ENSG00000078328	RBFOX1	96	89.418	Homo_sapiens
ENSPCAG00000002630	RBFOX1	97	64.491	ENSAPOG00000003197	rbfox1	88	66.125	Acanthochromis_polyacanthus
ENSPCAG00000002630	RBFOX1	66	84.400	ENSAMEG00000008605	RBFOX1	100	84.400	Ailuropoda_melanoleuca
ENSPCAG00000002630	RBFOX1	71	62.626	ENSACIG00000005478	rbfox1	68	62.626	Amphilophus_citrinellus
ENSPCAG00000002630	RBFOX1	76	63.192	ENSAOCG00000008283	rbfox1	96	64.169	Amphiprion_ocellaris
ENSPCAG00000002630	RBFOX1	89	62.537	ENSAPEG00000010636	rbfox1	88	61.947	Amphiprion_percula
ENSPCAG00000002630	RBFOX1	80	61.728	ENSATEG00000007513	rbfox1	97	62.379	Anabas_testudineus
ENSPCAG00000002630	RBFOX1	93	84.091	ENSAPLG00000013263	RBFOX1	88	84.091	Anas_platyrhynchos
ENSPCAG00000002630	RBFOX1	93	77.620	ENSACAG00000004013	RBFOX1	88	77.620	Anolis_carolinensis
ENSPCAG00000002630	RBFOX1	100	89.153	ENSANAG00000029527	RBFOX1	90	89.153	Aotus_nancymaae
ENSPCAG00000002630	RBFOX1	65	71.660	ENSAMXG00000002431	rbfox1	71	71.660	Astyanax_mexicanus
ENSPCAG00000002630	RBFOX1	93	89.429	ENSBTAG00000007210	RBFOX1	88	89.429	Bos_taurus
ENSPCAG00000002630	RBFOX1	100	89.153	ENSCJAG00000017351	RBFOX1	90	89.153	Callithrix_jacchus
ENSPCAG00000002630	RBFOX1	100	89.683	ENSCAFG00000019082	RBFOX1	90	89.683	Canis_familiaris
ENSPCAG00000002630	RBFOX1	78	87.500	ENSCAFG00020024881	RBFOX1	83	87.500	Canis_lupus_dingo
ENSPCAG00000002630	RBFOX1	95	87.500	ENSCHIG00000023549	RBFOX1	91	87.500	Capra_hircus
ENSPCAG00000002630	RBFOX1	92	89.685	ENSTSYG00000005334	RBFOX1	93	87.679	Carlito_syrichta
ENSPCAG00000002630	RBFOX1	100	88.095	ENSCAPG00000017669	RBFOX1	90	88.095	Cavia_aperea
ENSPCAG00000002630	RBFOX1	100	88.095	ENSCPOG00000011314	RBFOX1	90	88.095	Cavia_porcellus
ENSPCAG00000002630	RBFOX1	100	89.153	ENSCCAG00000023031	RBFOX1	90	89.153	Cebus_capucinus
ENSPCAG00000002630	RBFOX1	100	89.418	ENSCATG00000033816	RBFOX1	90	89.418	Cercocebus_atys
ENSPCAG00000002630	RBFOX1	100	88.360	ENSCLAG00000012761	RBFOX1	90	88.360	Chinchilla_lanigera
ENSPCAG00000002630	RBFOX1	88	85.542	ENSCSAG00000008739	RBFOX1	88	85.542	Chlorocebus_sabaeus
ENSPCAG00000002630	RBFOX1	100	66.402	ENSCHOG00000012843	RBFOX1	91	66.402	Choloepus_hoffmanni
ENSPCAG00000002630	RBFOX1	93	86.286	ENSCPBG00000026626	RBFOX1	88	86.286	Chrysemys_picta_bellii
ENSPCAG00000002630	RBFOX1	100	89.418	ENSCANG00000033125	RBFOX1	90	89.418	Colobus_angolensis_palliatus
ENSPCAG00000002630	RBFOX1	100	89.418	ENSCGRG00001013729	Rbfox1	90	89.418	Cricetulus_griseus_chok1gshd
ENSPCAG00000002630	RBFOX1	100	89.418	ENSCGRG00000003272	Rbfox1	90	89.418	Cricetulus_griseus_crigri
ENSPCAG00000002630	RBFOX1	89	63.408	ENSCSEG00000008840	rbfox1	89	63.408	Cynoglossus_semilaevis
ENSPCAG00000002630	RBFOX1	93	70.940	ENSDARG00000014746	rbfox1	100	75.610	Danio_rerio
ENSPCAG00000002630	RBFOX1	99	83.733	ENSDNOG00000043612	RBFOX1	90	83.733	Dasypus_novemcinctus
ENSPCAG00000002630	RBFOX1	93	84.986	ENSDORG00000010024	Rbfox1	90	84.703	Dipodomys_ordii
ENSPCAG00000002630	RBFOX1	79	91.139	ENSETEG00000003771	RBFOX1	72	91.139	Echinops_telfairi
ENSPCAG00000002630	RBFOX1	100	89.947	ENSEASG00005011599	RBFOX1	91	89.947	Equus_asinus_asinus
ENSPCAG00000002630	RBFOX1	100	89.683	ENSECAG00000012667	RBFOX1	91	89.683	Equus_caballus
ENSPCAG00000002630	RBFOX1	70	62.500	ENSELUG00000013096	rbfox1	73	62.500	Esox_lucius
ENSPCAG00000002630	RBFOX1	95	87.500	ENSFCAG00000025322	RBFOX1	88	85.241	Felis_catus
ENSPCAG00000002630	RBFOX1	86	83.642	ENSFALG00000004027	RBFOX1	97	83.642	Ficedula_albicollis
ENSPCAG00000002630	RBFOX1	100	88.624	ENSFDAG00000007388	RBFOX1	90	88.624	Fukomys_damarensis
ENSPCAG00000002630	RBFOX1	100	85.185	ENSGALG00000034325	RBFOX1	90	85.185	Gallus_gallus
ENSPCAG00000002630	RBFOX1	100	84.921	ENSGAGG00000023681	RBFOX1	90	84.921	Gopherus_agassizii
ENSPCAG00000002630	RBFOX1	100	89.418	ENSGGOG00000016871	-	90	89.418	Gorilla_gorilla
ENSPCAG00000002630	RBFOX1	100	88.624	ENSHGLG00000016944	RBFOX1	90	88.624	Heterocephalus_glaber_female
ENSPCAG00000002630	RBFOX1	100	88.624	ENSHGLG00100003272	RBFOX1	90	88.624	Heterocephalus_glaber_male
ENSPCAG00000002630	RBFOX1	89	65.805	ENSHCOG00000016419	rbfox1	91	65.805	Hippocampus_comes
ENSPCAG00000002630	RBFOX1	94	68.908	ENSIPUG00000015215	rbfox1	89	72.485	Ictalurus_punctatus
ENSPCAG00000002630	RBFOX1	100	88.095	ENSSTOG00000000322	RBFOX1	90	88.095	Ictidomys_tridecemlineatus
ENSPCAG00000002630	RBFOX1	100	87.302	ENSJJAG00000002575	Rbfox1	90	87.302	Jaculus_jaculus
ENSPCAG00000002630	RBFOX1	93	65.738	ENSLBEG00000014659	rbfox1	95	65.217	Labrus_bergylta
ENSPCAG00000002630	RBFOX1	94	75.140	ENSLOCG00000006675	rbfox1	89	75.493	Lepisosteus_oculatus
ENSPCAG00000002630	RBFOX1	71	99.254	ENSLAFG00000011480	RBFOX1	87	99.254	Loxodonta_africana
ENSPCAG00000002630	RBFOX1	100	89.418	ENSMFAG00000036447	RBFOX1	90	89.418	Macaca_fascicularis
ENSPCAG00000002630	RBFOX1	100	89.418	ENSMMUG00000003458	RBFOX1	90	89.418	Macaca_mulatta
ENSPCAG00000002630	RBFOX1	100	89.418	ENSMNEG00000032034	RBFOX1	94	87.566	Macaca_nemestrina
ENSPCAG00000002630	RBFOX1	100	89.418	ENSMLEG00000015382	RBFOX1	90	89.418	Mandrillus_leucophaeus
ENSPCAG00000002630	RBFOX1	89	65.439	ENSMAMG00000003142	rbfox1	96	63.607	Mastacembelus_armatus
ENSPCAG00000002630	RBFOX1	75	78.947	ENSMGAG00000008606	RBFOX1	96	78.571	Meleagris_gallopavo
ENSPCAG00000002630	RBFOX1	78	52.365	ENSMAUG00000020570	Rbfox1	69	54.717	Mesocricetus_auratus
ENSPCAG00000002630	RBFOX1	95	87.500	ENSMICG00000034286	RBFOX1	91	87.500	Microcebus_murinus
ENSPCAG00000002630	RBFOX1	100	89.153	ENSMOCG00000020932	Rbfox1	90	89.153	Microtus_ochrogaster
ENSPCAG00000002630	RBFOX1	89	66.176	ENSMMOG00000009716	rbfox1	86	65.588	Mola_mola
ENSPCAG00000002630	RBFOX1	85	84.062	ENSMODG00000005826	RBFOX1	90	84.062	Monodelphis_domestica
ENSPCAG00000002630	RBFOX1	97	65.252	ENSMALG00000003337	rbfox1	88	66.667	Monopterus_albus
ENSPCAG00000002630	RBFOX1	100	89.418	MGP_CAROLIEiJ_G0020427	Rbfox1	90	89.418	Mus_caroli
ENSPCAG00000002630	RBFOX1	100	89.153	ENSMUSG00000008658	Rbfox1	96	86.643	Mus_musculus
ENSPCAG00000002630	RBFOX1	100	89.418	MGP_PahariEiJ_G0016135	Rbfox1	90	89.418	Mus_pahari
ENSPCAG00000002630	RBFOX1	100	88.889	MGP_SPRETEiJ_G0021321	Rbfox1	90	88.889	Mus_spretus
ENSPCAG00000002630	RBFOX1	95	85.556	ENSMPUG00000014822	RBFOX1	91	85.556	Mustela_putorius_furo
ENSPCAG00000002630	RBFOX1	71	96.269	ENSMLUG00000015896	RBFOX1	87	96.269	Myotis_lucifugus
ENSPCAG00000002630	RBFOX1	100	89.153	ENSNGAG00000023276	Rbfox1	90	89.153	Nannospalax_galili
ENSPCAG00000002630	RBFOX1	96	52.835	ENSNBRG00000011084	rbfox1	89	52.835	Neolamprologus_brichardi
ENSPCAG00000002630	RBFOX1	100	89.153	ENSNLEG00000010017	-	90	89.153	Nomascus_leucogenys
ENSPCAG00000002630	RBFOX1	100	71.164	ENSMEUG00000012525	RBFOX1	90	71.164	Notamacropus_eugenii
ENSPCAG00000002630	RBFOX1	90	74.336	ENSOPRG00000006199	-	81	74.336	Ochotona_princeps
ENSPCAG00000002630	RBFOX1	100	88.360	ENSODEG00000013166	RBFOX1	90	88.360	Octodon_degus
ENSPCAG00000002630	RBFOX1	88	83.434	ENSOANG00000002379	RBFOX1	88	83.434	Ornithorhynchus_anatinus
ENSPCAG00000002630	RBFOX1	58	83.945	ENSOCUG00000001205	-	97	83.945	Oryctolagus_cuniculus
ENSPCAG00000002630	RBFOX1	93	87.179	ENSOGAG00000025535	RBFOX1	88	87.179	Otolemur_garnettii
ENSPCAG00000002630	RBFOX1	66	76.494	ENSOARG00000005135	RBFOX1	100	76.494	Ovis_aries
ENSPCAG00000002630	RBFOX1	92	87.679	ENSPPAG00000036238	-	90	87.679	Pan_paniscus
ENSPCAG00000002630	RBFOX1	100	89.418	ENSPPRG00000006546	RBFOX1	90	89.418	Panthera_pardus
ENSPCAG00000002630	RBFOX1	93	75.000	ENSPTIG00000021154	RBFOX1	88	74.286	Panthera_tigris_altaica
ENSPCAG00000002630	RBFOX1	100	89.418	ENSPTRG00000007744	RBFOX1	90	89.418	Pan_troglodytes
ENSPCAG00000002630	RBFOX1	100	89.418	ENSPANG00000026500	RBFOX1	90	89.418	Papio_anubis
ENSPCAG00000002630	RBFOX1	80	73.841	ENSPKIG00000019353	rbfox1	86	75.000	Paramormyrops_kingsleyae
ENSPCAG00000002630	RBFOX1	94	71.148	ENSPKIG00000009667	-	87	72.647	Paramormyrops_kingsleyae
ENSPCAG00000002630	RBFOX1	93	84.571	ENSPSIG00000006523	RBFOX1	87	84.571	Pelodiscus_sinensis
ENSPCAG00000002630	RBFOX1	100	89.418	ENSPEMG00000017607	Rbfox1	90	89.418	Peromyscus_maniculatus_bairdii
ENSPCAG00000002630	RBFOX1	66	91.304	ENSPCIG00000026887	RBFOX1	86	91.304	Phascolarctos_cinereus
ENSPCAG00000002630	RBFOX1	95	85.556	ENSPPYG00000007079	-	91	85.556	Pongo_abelii
ENSPCAG00000002630	RBFOX1	100	89.418	ENSPCOG00000025687	RBFOX1	90	89.418	Propithecus_coquereli
ENSPCAG00000002630	RBFOX1	100	85.185	ENSPVAG00000013467	RBFOX1	90	85.185	Pteropus_vampyrus
ENSPCAG00000002630	RBFOX1	89	70.028	ENSPNAG00000023109	rbfox1	89	70.028	Pygocentrus_nattereri
ENSPCAG00000002630	RBFOX1	100	86.772	ENSRNOG00000002827	Rbfox1	90	86.772	Rattus_norvegicus
ENSPCAG00000002630	RBFOX1	92	87.679	ENSRBIG00000044478	RBFOX1	90	87.679	Rhinopithecus_bieti
ENSPCAG00000002630	RBFOX1	100	89.418	ENSRROG00000044411	RBFOX1	97	86.626	Rhinopithecus_roxellana
ENSPCAG00000002630	RBFOX1	95	87.500	ENSSBOG00000033726	RBFOX1	91	87.500	Saimiri_boliviensis_boliviensis
ENSPCAG00000002630	RBFOX1	93	82.336	ENSSHAG00000009257	RBFOX1	88	82.336	Sarcophilus_harrisii
ENSPCAG00000002630	RBFOX1	80	76.364	ENSSFOG00015023675	rbfox1	85	76.364	Scleropages_formosus
ENSPCAG00000002630	RBFOX1	97	67.473	ENSSFOG00015009955	-	87	67.473	Scleropages_formosus
ENSPCAG00000002630	RBFOX1	97	64.921	ENSSMAG00000015505	rbfox1	94	66.576	Scophthalmus_maximus
ENSPCAG00000002630	RBFOX1	93	66.292	ENSSDUG00000016413	rbfox1	88	65.730	Seriola_dumerili
ENSPCAG00000002630	RBFOX1	89	66.862	ENSSLDG00000009353	rbfox1	93	64.375	Seriola_lalandi_dorsalis
ENSPCAG00000002630	RBFOX1	89	74.780	ENSSPUG00000009732	RBFOX1	87	74.780	Sphenodon_punctatus
ENSPCAG00000002630	RBFOX1	96	63.115	ENSSPAG00000009723	rbfox1	89	65.940	Stegastes_partitus
ENSPCAG00000002630	RBFOX1	100	89.418	ENSSSCG00000007917	RBFOX1	91	89.418	Sus_scrofa
ENSPCAG00000002630	RBFOX1	93	84.286	ENSTGUG00000004562	RBFOX1	90	84.286	Taeniopygia_guttata
ENSPCAG00000002630	RBFOX1	93	65.940	ENSTRUG00000020940	rbfox1	95	65.854	Takifugu_rubripes
ENSPCAG00000002630	RBFOX1	71	54.921	ENSTNIG00000002567	rbfox1	100	56.508	Tetraodon_nigroviridis
ENSPCAG00000002630	RBFOX1	72	82.759	ENSTBEG00000009169	-	65	82.759	Tupaia_belangeri
ENSPCAG00000002630	RBFOX1	100	89.683	ENSTTRG00000005700	RBFOX1	90	89.683	Tursiops_truncatus
ENSPCAG00000002630	RBFOX1	95	81.389	ENSUAMG00000024633	RBFOX1	90	82.500	Ursus_americanus
ENSPCAG00000002630	RBFOX1	95	73.333	ENSUMAG00000003579	RBFOX1	76	86.397	Ursus_maritimus
ENSPCAG00000002630	RBFOX1	79	98.507	ENSVPAG00000001284	RBFOX1	71	98.507	Vicugna_pacos
ENSPCAG00000002630	RBFOX1	96	85.596	ENSVVUG00000017311	RBFOX1	88	85.241	Vulpes_vulpes