EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002665 (Gene tree)
Gene ID: -
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 142173 bases
Position: chrGeneScaffold_3104:10577-152749
Accession: 10060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002627	TUDOR	PF00567.24	5.3e-60	1	5
ENSPCAP00000002627	TUDOR	PF00567.24	5.3e-60	2	5
ENSPCAP00000002627	TUDOR	PF00567.24	5.3e-60	3	5
ENSPCAP00000002627	TUDOR	PF00567.24	5.3e-60	4	5
ENSPCAP00000002627	TUDOR	PF00567.24	5.3e-60	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002786	RNF17-201	4869	-	ENSPCAP00000002627	1622 (aa)	-	UPI00018B00D0

Gene Model

Click here to download ENSPCAG00000002665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002665	RNF17	76	84.211	ENSG00000132972	RNF17	74	84.211	Homo_sapiens
ENSPCAG00000002665	RNF17	77	84.726	ENSAMEG00000017340	RNF17	74	84.726	Ailuropoda_melanoleuca
ENSPCAG00000002665	RNF17	65	38.164	ENSAOCG00000018283	rnf17	61	38.164	Amphiprion_ocellaris
ENSPCAG00000002665	RNF17	51	36.473	ENSAPEG00000022338	rnf17	54	36.473	Amphiprion_percula
ENSPCAG00000002665	RNF17	54	36.667	ENSATEG00000002067	rnf17	58	40.845	Anabas_testudineus
ENSPCAG00000002665	RNF17	66	63.889	ENSAPLG00000003969	RNF17	71	63.889	Anas_platyrhynchos
ENSPCAG00000002665	RNF17	61	53.012	ENSACAG00000001418	RNF17	59	53.012	Anolis_carolinensis
ENSPCAG00000002665	RNF17	67	84.211	ENSANAG00000029969	RNF17	65	84.211	Aotus_nancymaae
ENSPCAG00000002665	RNF17	65	38.072	ENSACLG00000018279	rnf17	61	38.072	Astatotilapia_calliptera
ENSPCAG00000002665	RNF17	76	84.211	ENSCJAG00000018937	RNF17	74	84.211	Callithrix_jacchus
ENSPCAG00000002665	RNF17	74	84.278	ENSCAFG00000007418	RNF17	74	84.211	Canis_familiaris
ENSPCAG00000002665	RNF17	73	89.189	ENSCHIG00000026716	RNF17	69	89.189	Capra_hircus
ENSPCAG00000002665	RNF17	72	84.211	ENSTSYG00000000365	RNF17	71	84.211	Carlito_syrichta
ENSPCAG00000002665	RNF17	59	84.211	ENSCAPG00000012908	RNF17	66	84.211	Cavia_aperea
ENSPCAG00000002665	RNF17	76	84.211	ENSCCAG00000026725	RNF17	74	84.211	Cebus_capucinus
ENSPCAG00000002665	RNF17	76	84.211	ENSCATG00000040352	RNF17	74	84.211	Cercocebus_atys
ENSPCAG00000002665	RNF17	76	81.579	ENSCLAG00000004127	RNF17	72	81.579	Chinchilla_lanigera
ENSPCAG00000002665	RNF17	76	84.211	ENSCSAG00000018019	RNF17	74	84.211	Chlorocebus_sabaeus
ENSPCAG00000002665	RNF17	69	88.983	ENSCHOG00000013310	RNF17	67	88.983	Choloepus_hoffmanni
ENSPCAG00000002665	RNF17	66	68.750	ENSCPBG00000020920	RNF17	65	68.750	Chrysemys_picta_bellii
ENSPCAG00000002665	RNF17	76	84.211	ENSCANG00000032927	RNF17	74	84.211	Colobus_angolensis_palliatus
ENSPCAG00000002665	RNF17	76	81.579	ENSCGRG00001022658	Rnf17	72	81.579	Cricetulus_griseus_chok1gshd
ENSPCAG00000002665	RNF17	76	81.579	ENSCGRG00000009924	Rnf17	72	81.579	Cricetulus_griseus_crigri
ENSPCAG00000002665	RNF17	65	38.350	ENSDARG00000056387	rnf17	64	38.350	Danio_rerio
ENSPCAG00000002665	RNF17	73	85.442	ENSDNOG00000006115	RNF17	69	85.442	Dasypus_novemcinctus
ENSPCAG00000002665	RNF17	52	87.069	ENSETEG00000017874	-	51	87.069	Echinops_telfairi
ENSPCAG00000002665	RNF17	76	84.211	ENSECAG00000017152	RNF17	72	84.211	Equus_caballus
ENSPCAG00000002665	RNF17	51	81.579	ENSEEUG00000000332	RNF17	55	81.579	Erinaceus_europaeus
ENSPCAG00000002665	RNF17	76	84.726	ENSFCAG00000004914	RNF17	74	84.726	Felis_catus
ENSPCAG00000002665	RNF17	62	54.386	ENSFALG00000008766	RNF17	63	54.386	Ficedula_albicollis
ENSPCAG00000002665	RNF17	76	84.211	ENSFDAG00000017857	RNF17	73	84.211	Fukomys_damarensis
ENSPCAG00000002665	RNF17	66	60.526	ENSGAGG00000016999	RNF17	62	60.526	Gopherus_agassizii
ENSPCAG00000002665	RNF17	72	84.211	ENSGGOG00000014491	RNF17	74	84.211	Gorilla_gorilla
ENSPCAG00000002665	RNF17	65	37.923	ENSHBUG00000003554	rnf17	61	37.923	Haplochromis_burtoni
ENSPCAG00000002665	RNF17	76	81.579	ENSHGLG00000007270	RNF17	73	81.579	Heterocephalus_glaber_female
ENSPCAG00000002665	RNF17	76	81.579	ENSHGLG00100017393	RNF17	73	81.579	Heterocephalus_glaber_male
ENSPCAG00000002665	RNF17	52	39.563	ENSIPUG00000001087	rnf17	53	39.563	Ictalurus_punctatus
ENSPCAG00000002665	RNF17	76	81.579	ENSJJAG00000016584	Rnf17	73	81.579	Jaculus_jaculus
ENSPCAG00000002665	RNF17	52	67.227	ENSLACG00000000323	RNF17	58	67.227	Latimeria_chalumnae
ENSPCAG00000002665	RNF17	52	38.442	ENSLOCG00000010768	rnf17	52	38.442	Lepisosteus_oculatus
ENSPCAG00000002665	RNF17	76	84.211	ENSMFAG00000032388	RNF17	74	84.211	Macaca_fascicularis
ENSPCAG00000002665	RNF17	76	84.211	ENSMMUG00000014610	RNF17	74	84.211	Macaca_mulatta
ENSPCAG00000002665	RNF17	76	84.211	ENSMNEG00000011234	RNF17	74	84.211	Macaca_nemestrina
ENSPCAG00000002665	RNF17	76	84.211	ENSMLEG00000030227	RNF17	74	84.211	Mandrillus_leucophaeus
ENSPCAG00000002665	RNF17	65	38.072	ENSMZEG00005019166	rnf17	61	38.072	Maylandia_zebra
ENSPCAG00000002665	RNF17	52	52.392	ENSMGAG00000015138	RNF17	64	52.392	Meleagris_gallopavo
ENSPCAG00000002665	RNF17	76	81.579	ENSMAUG00000004788	Rnf17	72	81.579	Mesocricetus_auratus
ENSPCAG00000002665	RNF17	76	84.211	ENSMICG00000010364	RNF17	74	84.211	Microcebus_murinus
ENSPCAG00000002665	RNF17	76	78.947	ENSMODG00000007827	RNF17	72	78.947	Monodelphis_domestica
ENSPCAG00000002665	RNF17	76	84.211	MGP_CAROLIEiJ_G0019337	Rnf17	72	84.211	Mus_caroli
ENSPCAG00000002665	RNF17	76	84.211	ENSMUSG00000000365	Rnf17	72	84.211	Mus_musculus
ENSPCAG00000002665	RNF17	76	84.211	MGP_PahariEiJ_G0030355	Rnf17	73	84.211	Mus_pahari
ENSPCAG00000002665	RNF17	76	84.211	MGP_SPRETEiJ_G0020228	Rnf17	72	84.211	Mus_spretus
ENSPCAG00000002665	RNF17	76	84.964	ENSMPUG00000013305	RNF17	74	84.964	Mustela_putorius_furo
ENSPCAG00000002665	RNF17	76	84.248	ENSMLUG00000003903	RNF17	74	84.248	Myotis_lucifugus
ENSPCAG00000002665	RNF17	76	77.804	ENSNGAG00000013553	Rnf17	72	77.804	Nannospalax_galili
ENSPCAG00000002665	RNF17	76	81.579	ENSNLEG00000013780	RNF17	73	81.579	Nomascus_leucogenys
ENSPCAG00000002665	RNF17	64	78.947	ENSOPRG00000016743	-	65	78.947	Ochotona_princeps
ENSPCAG00000002665	RNF17	51	38.313	ENSONIG00000015746	rnf17	64	38.313	Oreochromis_niloticus
ENSPCAG00000002665	RNF17	76	81.579	ENSOCUG00000007384	RNF17	73	81.579	Oryctolagus_cuniculus
ENSPCAG00000002665	RNF17	50	38.406	ENSORLG00000012818	rnf17	54	38.406	Oryzias_latipes
ENSPCAG00000002665	RNF17	76	81.579	ENSOGAG00000014803	RNF17	74	81.623	Otolemur_garnettii
ENSPCAG00000002665	RNF17	76	89.189	ENSOARG00000014641	RNF17	74	89.189	Ovis_aries
ENSPCAG00000002665	RNF17	69	84.211	ENSPPAG00000028779	RNF17	70	84.211	Pan_paniscus
ENSPCAG00000002665	RNF17	76	84.726	ENSPPRG00000009230	RNF17	74	84.726	Panthera_pardus
ENSPCAG00000002665	RNF17	76	84.726	ENSPTIG00000001738	RNF17	74	84.726	Panthera_tigris_altaica
ENSPCAG00000002665	RNF17	76	84.211	ENSPTRG00000005713	RNF17	74	84.211	Pan_troglodytes
ENSPCAG00000002665	RNF17	76	84.211	ENSPANG00000007640	RNF17	74	84.211	Papio_anubis
ENSPCAG00000002665	RNF17	51	39.078	ENSPKIG00000001648	rnf17	59	39.078	Paramormyrops_kingsleyae
ENSPCAG00000002665	RNF17	59	63.158	ENSPSIG00000011245	RNF17	75	63.158	Pelodiscus_sinensis
ENSPCAG00000002665	RNF17	76	81.579	ENSPEMG00000008693	Rnf17	73	81.579	Peromyscus_maniculatus_bairdii
ENSPCAG00000002665	RNF17	76	84.211	ENSPPYG00000005215	RNF17	74	84.211	Pongo_abelii
ENSPCAG00000002665	RNF17	56	73.600	ENSPCOG00000020211	RNF17	63	73.600	Propithecus_coquereli
ENSPCAG00000002665	RNF17	73	76.316	ENSPVAG00000013021	RNF17	72	76.316	Pteropus_vampyrus
ENSPCAG00000002665	RNF17	52	38.592	ENSPNAG00000027505	rnf17	57	38.592	Pygocentrus_nattereri
ENSPCAG00000002665	RNF17	76	78.947	ENSRNOG00000008059	Rnf17	73	78.947	Rattus_norvegicus
ENSPCAG00000002665	RNF17	76	84.211	ENSRBIG00000027010	RNF17	69	84.211	Rhinopithecus_bieti
ENSPCAG00000002665	RNF17	76	84.211	ENSRROG00000022801	RNF17	74	84.211	Rhinopithecus_roxellana
ENSPCAG00000002665	RNF17	76	84.211	ENSSBOG00000021661	RNF17	74	84.211	Saimiri_boliviensis_boliviensis
ENSPCAG00000002665	RNF17	76	78.947	ENSSHAG00000005609	RNF17	73	78.947	Sarcophilus_harrisii
ENSPCAG00000002665	RNF17	62	83.193	ENSSARG00000003016	RNF17	60	83.193	Sorex_araneus
ENSPCAG00000002665	RNF17	58	58.046	ENSSPUG00000008917	RNF17	59	61.111	Sphenodon_punctatus
ENSPCAG00000002665	RNF17	76	84.211	ENSSSCG00000009572	RNF17	72	84.211	Sus_scrofa
ENSPCAG00000002665	RNF17	51	36.473	ENSTRUG00000015498	rnf17	51	36.473	Takifugu_rubripes
ENSPCAG00000002665	RNF17	51	34.689	ENSTNIG00000015681	rnf17	66	34.689	Tetraodon_nigroviridis
ENSPCAG00000002665	RNF17	56	87.288	ENSTBEG00000000282	RNF17	55	87.288	Tupaia_belangeri
ENSPCAG00000002665	RNF17	69	81.384	ENSTTRG00000012698	RNF17	67	81.384	Tursiops_truncatus
ENSPCAG00000002665	RNF17	67	84.211	ENSVPAG00000011388	RNF17	66	84.211	Vicugna_pacos
ENSPCAG00000002665	RNF17	76	84.487	ENSVVUG00000006226	RNF17	74	84.487	Vulpes_vulpes