EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002700 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 26603 bases
Position: chrGeneScaffold_2705:4962-31564
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002524	Ribonuc_P_40	PF08584.11	1.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002675	-	555	-	ENSPCAP00000002524	185 (aa)	-	UPI00018ADCFF

Gene Model

Click here to download ENSPCAG00000002700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002700	-	99	84.239	ENSG00000124787	RPP40	79	79.775	Homo_sapiens
ENSPCAG00000002700	-	99	86.413	ENSAMEG00000012938	RPP40	51	86.413	Ailuropoda_melanoleuca
ENSPCAG00000002700	-	97	39.444	ENSACIG00000003617	rpp40	54	39.444	Amphilophus_citrinellus
ENSPCAG00000002700	-	97	39.444	ENSAOCG00000011846	rpp40	52	39.444	Amphiprion_ocellaris
ENSPCAG00000002700	-	97	39.444	ENSAPEG00000001322	rpp40	52	39.444	Amphiprion_percula
ENSPCAG00000002700	-	97	41.667	ENSATEG00000006584	rpp40	51	41.667	Anabas_testudineus
ENSPCAG00000002700	-	99	82.609	ENSANAG00000029246	RPP40	51	82.609	Aotus_nancymaae
ENSPCAG00000002700	-	99	40.217	ENSACLG00000015883	rpp40	52	40.217	Astatotilapia_calliptera
ENSPCAG00000002700	-	99	86.413	ENSBTAG00000003332	RPP40	51	86.413	Bos_taurus
ENSPCAG00000002700	-	100	82.258	ENSCJAG00000021373	RPP40	83	82.258	Callithrix_jacchus
ENSPCAG00000002700	-	99	88.043	ENSCAFG00000009435	RPP40	51	88.043	Canis_familiaris
ENSPCAG00000002700	-	99	88.043	ENSCAFG00020013380	RPP40	51	88.043	Canis_lupus_dingo
ENSPCAG00000002700	-	99	85.326	ENSCHIG00000016849	RPP40	51	85.326	Capra_hircus
ENSPCAG00000002700	-	100	84.409	ENSTSYG00000032857	RPP40	51	84.409	Carlito_syrichta
ENSPCAG00000002700	-	99	83.152	ENSCPOG00000005855	RPP40	51	83.152	Cavia_porcellus
ENSPCAG00000002700	-	99	82.065	ENSCCAG00000019809	RPP40	51	82.065	Cebus_capucinus
ENSPCAG00000002700	-	99	84.783	ENSCATG00000038787	RPP40	51	84.783	Cercocebus_atys
ENSPCAG00000002700	-	99	82.609	ENSCLAG00000003235	RPP40	51	82.609	Chinchilla_lanigera
ENSPCAG00000002700	-	99	83.696	ENSCSAG00000007307	RPP40	51	83.696	Chlorocebus_sabaeus
ENSPCAG00000002700	-	97	65.746	ENSCPBG00000009003	RPP40	50	65.746	Chrysemys_picta_bellii
ENSPCAG00000002700	-	99	84.239	ENSCANG00000033965	RPP40	51	84.239	Colobus_angolensis_palliatus
ENSPCAG00000002700	-	99	77.174	ENSCGRG00001018328	Rpp40	50	77.174	Cricetulus_griseus_chok1gshd
ENSPCAG00000002700	-	99	77.174	ENSCGRG00000011344	Rpp40	50	77.174	Cricetulus_griseus_crigri
ENSPCAG00000002700	-	100	83.871	ENSDNOG00000048136	RPP40	62	83.871	Dasypus_novemcinctus
ENSPCAG00000002700	-	99	82.609	ENSDORG00000029944	-	51	82.609	Dipodomys_ordii
ENSPCAG00000002700	-	100	54.839	ENSETEG00000007458	RPP40	51	54.839	Echinops_telfairi
ENSPCAG00000002700	-	99	62.500	ENSEEUG00000012087	RPP40	62	62.500	Erinaceus_europaeus
ENSPCAG00000002700	-	99	88.043	ENSFCAG00000009249	RPP40	51	88.043	Felis_catus
ENSPCAG00000002700	-	99	88.043	ENSFDAG00000013001	-	51	88.043	Fukomys_damarensis
ENSPCAG00000002700	-	97	61.326	ENSGALG00000036074	RPP40	50	61.326	Gallus_gallus
ENSPCAG00000002700	-	97	41.111	ENSGACG00000002472	rpp40	51	41.111	Gasterosteus_aculeatus
ENSPCAG00000002700	-	97	66.298	ENSGAGG00000012918	RPP40	50	66.298	Gopherus_agassizii
ENSPCAG00000002700	-	99	84.239	ENSGGOG00000013764	RPP40	51	84.239	Gorilla_gorilla
ENSPCAG00000002700	-	99	85.870	ENSHGLG00000004871	RPP40	51	85.870	Heterocephalus_glaber_female
ENSPCAG00000002700	-	99	85.870	ENSHGLG00100002080	RPP40	51	85.870	Heterocephalus_glaber_male
ENSPCAG00000002700	-	96	46.369	ENSIPUG00000008951	RPP40	50	46.369	Ictalurus_punctatus
ENSPCAG00000002700	-	99	85.870	ENSSTOG00000011199	RPP40	51	85.870	Ictidomys_tridecemlineatus
ENSPCAG00000002700	-	99	75.543	ENSJJAG00000020629	Rpp40	51	75.543	Jaculus_jaculus
ENSPCAG00000002700	-	97	41.111	ENSKMAG00000019358	rpp40	52	41.111	Kryptolebias_marmoratus
ENSPCAG00000002700	-	97	41.111	ENSLBEG00000022724	rpp40	51	41.111	Labrus_bergylta
ENSPCAG00000002700	-	98	53.552	ENSLACG00000014848	RPP40	51	53.552	Latimeria_chalumnae
ENSPCAG00000002700	-	99	52.717	ENSLOCG00000011650	rpp40	51	52.717	Lepisosteus_oculatus
ENSPCAG00000002700	-	99	84.239	ENSMFAG00000043100	RPP40	51	84.239	Macaca_fascicularis
ENSPCAG00000002700	-	99	84.239	ENSMMUG00000004966	RPP40	51	84.239	Macaca_mulatta
ENSPCAG00000002700	-	99	84.783	ENSMNEG00000041986	RPP40	51	84.783	Macaca_nemestrina
ENSPCAG00000002700	-	97	43.333	ENSMAMG00000019551	rpp40	51	43.333	Mastacembelus_armatus
ENSPCAG00000002700	-	99	40.217	ENSMZEG00005019475	rpp40	53	40.217	Maylandia_zebra
ENSPCAG00000002700	-	97	56.216	ENSMGAG00000004009	RPP40	50	56.216	Meleagris_gallopavo
ENSPCAG00000002700	-	99	78.804	ENSMAUG00000010268	Rpp40	51	78.804	Mesocricetus_auratus
ENSPCAG00000002700	-	100	80.645	ENSMOCG00000000305	Rpp40	51	80.645	Microtus_ochrogaster
ENSPCAG00000002700	-	99	78.804	ENSMODG00000009826	RPP40	51	78.804	Monodelphis_domestica
ENSPCAG00000002700	-	97	41.667	ENSMALG00000020133	rpp40	52	41.667	Monopterus_albus
ENSPCAG00000002700	-	99	84.239	MGP_CAROLIEiJ_G0018429	Rpp40	51	84.239	Mus_caroli
ENSPCAG00000002700	-	100	83.871	ENSMUSG00000021418	Rpp40	51	83.871	Mus_musculus
ENSPCAG00000002700	-	99	82.609	MGP_PahariEiJ_G0019497	Rpp40	51	82.609	Mus_pahari
ENSPCAG00000002700	-	99	83.696	MGP_SPRETEiJ_G0019309	Rpp40	51	83.696	Mus_spretus
ENSPCAG00000002700	-	99	85.326	ENSMLUG00000000501	RPP40	51	85.326	Myotis_lucifugus
ENSPCAG00000002700	-	99	84.239	ENSNGAG00000023955	-	51	84.239	Nannospalax_galili
ENSPCAG00000002700	-	99	83.152	ENSNLEG00000034397	RPP40	51	83.152	Nomascus_leucogenys
ENSPCAG00000002700	-	99	65.761	ENSMEUG00000005300	RPP40	50	65.761	Notamacropus_eugenii
ENSPCAG00000002700	-	99	84.239	ENSODEG00000007255	-	51	84.239	Octodon_degus
ENSPCAG00000002700	-	99	83.696	ENSODEG00000018153	-	52	83.696	Octodon_degus
ENSPCAG00000002700	-	99	41.848	ENSONIG00000014016	rpp40	52	41.848	Oreochromis_niloticus
ENSPCAG00000002700	-	99	77.717	ENSOCUG00000000354	RPP40	51	77.717	Oryctolagus_cuniculus
ENSPCAG00000002700	-	98	39.891	ENSORLG00000008242	-	53	39.891	Oryzias_latipes
ENSPCAG00000002700	-	98	40.437	ENSORLG00015000887	-	53	40.437	Oryzias_latipes_hsok
ENSPCAG00000002700	-	98	39.344	ENSOMEG00000002747	rpp40	53	39.344	Oryzias_melastigma
ENSPCAG00000002700	-	99	85.870	ENSOGAG00000006055	RPP40	51	85.870	Otolemur_garnettii
ENSPCAG00000002700	-	99	83.152	ENSPPAG00000023703	RPP40	51	83.152	Pan_paniscus
ENSPCAG00000002700	-	99	87.500	ENSPPRG00000005612	RPP40	51	87.500	Panthera_pardus
ENSPCAG00000002700	-	99	88.043	ENSPTIG00000018847	RPP40	51	88.043	Panthera_tigris_altaica
ENSPCAG00000002700	-	99	84.239	ENSPTRG00000017690	RPP40	51	84.239	Pan_troglodytes
ENSPCAG00000002700	-	99	84.239	ENSPANG00000017865	RPP40	51	84.239	Papio_anubis
ENSPCAG00000002700	-	96	50.838	ENSPKIG00000006311	rpp40	50	50.838	Paramormyrops_kingsleyae
ENSPCAG00000002700	-	99	78.804	ENSPCIG00000010682	RPP40	51	78.804	Phascolarctos_cinereus
ENSPCAG00000002700	-	97	39.560	ENSPFOG00000011460	rpp40	51	39.560	Poecilia_formosa
ENSPCAG00000002700	-	97	40.000	ENSPLAG00000001334	rpp40	51	40.000	Poecilia_latipinna
ENSPCAG00000002700	-	97	39.444	ENSPMEG00000007721	rpp40	51	39.444	Poecilia_mexicana
ENSPCAG00000002700	-	97	41.667	ENSPREG00000009215	rpp40	51	41.667	Poecilia_reticulata
ENSPCAG00000002700	-	99	84.239	ENSPPYG00000016194	RPP40	51	84.239	Pongo_abelii
ENSPCAG00000002700	-	99	87.500	ENSPCOG00000003907	RPP40	51	87.500	Propithecus_coquereli
ENSPCAG00000002700	-	99	86.957	ENSPVAG00000011325	RPP40	51	86.957	Pteropus_vampyrus
ENSPCAG00000002700	-	97	46.961	ENSPNAG00000019125	rpp40	50	46.961	Pygocentrus_nattereri
ENSPCAG00000002700	-	99	83.696	ENSRNOG00000016226	Rpp40	51	83.696	Rattus_norvegicus
ENSPCAG00000002700	-	99	84.783	ENSRBIG00000035800	RPP40	51	84.783	Rhinopithecus_bieti
ENSPCAG00000002700	-	99	84.783	ENSRROG00000039116	RPP40	51	84.783	Rhinopithecus_roxellana
ENSPCAG00000002700	-	99	82.065	ENSSBOG00000020297	RPP40	51	82.065	Saimiri_boliviensis_boliviensis
ENSPCAG00000002700	-	97	39.444	ENSSDUG00000007202	rpp40	51	39.444	Seriola_dumerili
ENSPCAG00000002700	-	97	39.444	ENSSLDG00000017563	rpp40	51	39.444	Seriola_lalandi_dorsalis
ENSPCAG00000002700	-	98	65.027	ENSSPUG00000017487	-	50	65.027	Sphenodon_punctatus
ENSPCAG00000002700	-	97	40.000	ENSSPAG00000022716	rpp40	52	40.000	Stegastes_partitus
ENSPCAG00000002700	-	99	82.065	ENSSSCG00000000998	RPP40	51	82.065	Sus_scrofa
ENSPCAG00000002700	-	96	60.335	ENSTGUG00000002258	-	50	60.335	Taeniopygia_guttata
ENSPCAG00000002700	-	95	39.773	ENSTRUG00000003755	rpp40	50	39.773	Takifugu_rubripes
ENSPCAG00000002700	-	95	40.909	ENSTNIG00000003077	rpp40	50	40.909	Tetraodon_nigroviridis
ENSPCAG00000002700	-	98	73.224	ENSTTRG00000007319	RPP40	51	73.224	Tursiops_truncatus
ENSPCAG00000002700	-	99	85.870	ENSUAMG00000002159	RPP40	51	85.870	Ursus_americanus
ENSPCAG00000002700	-	97	60.000	ENSVPAG00000004652	-	60	60.000	Vicugna_pacos
ENSPCAG00000002700	-	99	87.500	ENSVVUG00000005451	RPP40	51	87.500	Vulpes_vulpes
ENSPCAG00000002700	-	98	51.630	ENSXETG00000017617	rpp40	50	51.630	Xenopus_tropicalis