EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002802 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 29218 bases
Position: chrGeneScaffold_6397:108170-137387
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002623	FDF	PF09532.10	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002782	EDC3-201	1530	-	ENSPCAP00000002623	509 (aa)	-	UPI00018AFEAD

Gene Model

Click here to download ENSPCAG00000002802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002802	EDC3	88	100.000	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSPCAG00000002802	EDC3	88	83.333	ENSAPOG00000010791	edc3	93	83.333	Acanthochromis_polyacanthus
ENSPCAG00000002802	EDC3	84	77.778	ENSAPOG00000008655	EDC3	89	77.778	Acanthochromis_polyacanthus
ENSPCAG00000002802	EDC3	88	98.148	ENSAMEG00000008963	EDC3	88	98.148	Ailuropoda_melanoleuca
ENSPCAG00000002802	EDC3	84	81.481	ENSACIG00000017751	edc3	90	81.481	Amphilophus_citrinellus
ENSPCAG00000002802	EDC3	79	74.074	ENSACIG00000005330	EDC3	82	74.074	Amphilophus_citrinellus
ENSPCAG00000002802	EDC3	80	81.481	ENSAOCG00000009103	-	87	81.481	Amphiprion_ocellaris
ENSPCAG00000002802	EDC3	88	81.481	ENSAOCG00000005431	edc3	93	81.481	Amphiprion_ocellaris
ENSPCAG00000002802	EDC3	88	81.481	ENSAPEG00000000968	edc3	93	81.481	Amphiprion_percula
ENSPCAG00000002802	EDC3	80	81.481	ENSAPEG00000007841	EDC3	87	81.481	Amphiprion_percula
ENSPCAG00000002802	EDC3	79	79.630	ENSATEG00000004205	-	86	79.630	Anabas_testudineus
ENSPCAG00000002802	EDC3	88	81.481	ENSATEG00000015505	edc3	93	81.481	Anabas_testudineus
ENSPCAG00000002802	EDC3	77	89.567	ENSAPLG00000008957	EDC3	87	89.567	Anas_platyrhynchos
ENSPCAG00000002802	EDC3	66	92.593	ENSACAG00000000460	-	85	92.593	Anolis_carolinensis
ENSPCAG00000002802	EDC3	88	100.000	ENSANAG00000024078	EDC3	88	100.000	Aotus_nancymaae
ENSPCAG00000002802	EDC3	82	77.778	ENSACLG00000018776	-	90	77.778	Astatotilapia_calliptera
ENSPCAG00000002802	EDC3	88	81.481	ENSACLG00000007232	edc3	93	81.481	Astatotilapia_calliptera
ENSPCAG00000002802	EDC3	88	81.481	ENSAMXG00000001589	edc3	89	81.481	Astyanax_mexicanus
ENSPCAG00000002802	EDC3	88	100.000	ENSBTAG00000007308	EDC3	88	100.000	Bos_taurus
ENSPCAG00000002802	EDC3	88	100.000	ENSCJAG00000017681	EDC3	88	100.000	Callithrix_jacchus
ENSPCAG00000002802	EDC3	88	100.000	ENSCAFG00000017935	EDC3	88	100.000	Canis_familiaris
ENSPCAG00000002802	EDC3	88	100.000	ENSCAFG00020003909	EDC3	88	100.000	Canis_lupus_dingo
ENSPCAG00000002802	EDC3	88	100.000	ENSCHIG00000023658	EDC3	88	100.000	Capra_hircus
ENSPCAG00000002802	EDC3	88	100.000	ENSTSYG00000004822	EDC3	88	100.000	Carlito_syrichta
ENSPCAG00000002802	EDC3	88	100.000	ENSCPOG00000015595	EDC3	88	100.000	Cavia_porcellus
ENSPCAG00000002802	EDC3	88	100.000	ENSCCAG00000021663	EDC3	88	100.000	Cebus_capucinus
ENSPCAG00000002802	EDC3	88	100.000	ENSCATG00000037511	EDC3	88	100.000	Cercocebus_atys
ENSPCAG00000002802	EDC3	88	100.000	ENSCLAG00000005700	EDC3	88	100.000	Chinchilla_lanigera
ENSPCAG00000002802	EDC3	88	100.000	ENSCSAG00000014239	EDC3	88	100.000	Chlorocebus_sabaeus
ENSPCAG00000002802	EDC3	88	98.148	ENSCPBG00000024239	EDC3	88	98.148	Chrysemys_picta_bellii
ENSPCAG00000002802	EDC3	65	47.181	ENSCING00000022142	-	66	47.181	Ciona_intestinalis
ENSPCAG00000002802	EDC3	88	100.000	ENSCANG00000028699	EDC3	88	100.000	Colobus_angolensis_palliatus
ENSPCAG00000002802	EDC3	88	98.148	ENSCGRG00001013874	Edc3	88	98.148	Cricetulus_griseus_chok1gshd
ENSPCAG00000002802	EDC3	88	98.148	ENSCGRG00000011885	Edc3	88	98.148	Cricetulus_griseus_crigri
ENSPCAG00000002802	EDC3	87	81.481	ENSCSEG00000012996	edc3	93	81.481	Cynoglossus_semilaevis
ENSPCAG00000002802	EDC3	84	79.630	ENSCVAG00000008023	edc3	90	79.630	Cyprinodon_variegatus
ENSPCAG00000002802	EDC3	87	74.112	ENSDARG00000051931	edc3	88	74.112	Danio_rerio
ENSPCAG00000002802	EDC3	88	100.000	ENSDNOG00000030661	EDC3	88	100.000	Dasypus_novemcinctus
ENSPCAG00000002802	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSPCAG00000002802	EDC3	88	100.000	ENSEASG00005005071	EDC3	88	100.000	Equus_asinus_asinus
ENSPCAG00000002802	EDC3	88	100.000	ENSECAG00000017994	EDC3	88	100.000	Equus_caballus
ENSPCAG00000002802	EDC3	88	81.481	ENSELUG00000005794	edc3	94	81.481	Esox_lucius
ENSPCAG00000002802	EDC3	79	75.926	ENSELUG00000007607	EDC3	85	75.926	Esox_lucius
ENSPCAG00000002802	EDC3	88	98.148	ENSFCAG00000002014	EDC3	88	98.148	Felis_catus
ENSPCAG00000002802	EDC3	86	98.148	ENSFALG00000004543	EDC3	84	98.148	Ficedula_albicollis
ENSPCAG00000002802	EDC3	88	100.000	ENSFDAG00000012582	EDC3	88	100.000	Fukomys_damarensis
ENSPCAG00000002802	EDC3	88	81.481	ENSFHEG00000009375	edc3	93	81.481	Fundulus_heteroclitus
ENSPCAG00000002802	EDC3	88	81.481	ENSGMOG00000002715	edc3	93	81.481	Gadus_morhua
ENSPCAG00000002802	EDC3	88	98.148	ENSGALG00000040181	EDC3	88	98.148	Gallus_gallus
ENSPCAG00000002802	EDC3	88	79.630	ENSGAFG00000014433	edc3	93	79.630	Gambusia_affinis
ENSPCAG00000002802	EDC3	78	72.222	ENSGACG00000014671	EDC3	79	72.222	Gasterosteus_aculeatus
ENSPCAG00000002802	EDC3	87	77.778	ENSGACG00000009783	edc3	92	77.778	Gasterosteus_aculeatus
ENSPCAG00000002802	EDC3	88	98.148	ENSGAGG00000023477	EDC3	88	98.148	Gopherus_agassizii
ENSPCAG00000002802	EDC3	88	100.000	ENSGGOG00000003552	EDC3	88	100.000	Gorilla_gorilla
ENSPCAG00000002802	EDC3	88	81.481	ENSHBUG00000003635	edc3	93	81.481	Haplochromis_burtoni
ENSPCAG00000002802	EDC3	82	77.778	ENSHBUG00000020817	EDC3	90	77.778	Haplochromis_burtoni
ENSPCAG00000002802	EDC3	84	79.630	ENSHCOG00000016834	edc3	90	79.630	Hippocampus_comes
ENSPCAG00000002802	EDC3	88	77.778	ENSIPUG00000005695	edc3	90	77.778	Ictalurus_punctatus
ENSPCAG00000002802	EDC3	88	100.000	ENSSTOG00000013936	EDC3	88	100.000	Ictidomys_tridecemlineatus
ENSPCAG00000002802	EDC3	88	98.148	ENSJJAG00000008074	Edc3	88	98.148	Jaculus_jaculus
ENSPCAG00000002802	EDC3	80	74.074	ENSKMAG00000001987	EDC3	87	74.074	Kryptolebias_marmoratus
ENSPCAG00000002802	EDC3	88	81.481	ENSKMAG00000001243	edc3	93	81.481	Kryptolebias_marmoratus
ENSPCAG00000002802	EDC3	88	79.630	ENSLBEG00000013435	edc3	92	79.630	Labrus_bergylta
ENSPCAG00000002802	EDC3	80	75.926	ENSLBEG00000017984	EDC3	87	75.926	Labrus_bergylta
ENSPCAG00000002802	EDC3	88	84.478	ENSLACG00000014149	EDC3	87	84.478	Latimeria_chalumnae
ENSPCAG00000002802	EDC3	87	79.630	ENSLOCG00000014625	edc3	90	79.630	Lepisosteus_oculatus
ENSPCAG00000002802	EDC3	88	96.438	ENSLAFG00000002992	EDC3	88	96.438	Loxodonta_africana
ENSPCAG00000002802	EDC3	88	98.148	ENSMFAG00000043074	EDC3	88	98.148	Macaca_fascicularis
ENSPCAG00000002802	EDC3	88	98.148	ENSMMUG00000011071	EDC3	88	98.148	Macaca_mulatta
ENSPCAG00000002802	EDC3	88	98.148	ENSMNEG00000035316	EDC3	88	98.148	Macaca_nemestrina
ENSPCAG00000002802	EDC3	88	100.000	ENSMLEG00000030372	EDC3	88	100.000	Mandrillus_leucophaeus
ENSPCAG00000002802	EDC3	78	70.370	ENSMAMG00000005423	-	85	70.370	Mastacembelus_armatus
ENSPCAG00000002802	EDC3	88	81.481	ENSMAMG00000000505	edc3	93	81.481	Mastacembelus_armatus
ENSPCAG00000002802	EDC3	88	81.481	ENSMZEG00005004892	edc3	93	81.481	Maylandia_zebra
ENSPCAG00000002802	EDC3	78	77.778	ENSMZEG00005005654	EDC3	84	77.778	Maylandia_zebra
ENSPCAG00000002802	EDC3	88	98.148	ENSMGAG00000002617	EDC3	88	98.148	Meleagris_gallopavo
ENSPCAG00000002802	EDC3	88	98.148	ENSMICG00000043190	EDC3	88	98.148	Microcebus_murinus
ENSPCAG00000002802	EDC3	88	96.947	ENSMOCG00000016205	Edc3	88	96.947	Microtus_ochrogaster
ENSPCAG00000002802	EDC3	87	79.630	ENSMMOG00000012278	edc3	93	79.630	Mola_mola
ENSPCAG00000002802	EDC3	88	98.148	ENSMODG00000009442	EDC3	88	98.148	Monodelphis_domestica
ENSPCAG00000002802	EDC3	88	79.630	ENSMALG00000008658	edc3	93	79.630	Monopterus_albus
ENSPCAG00000002802	EDC3	88	98.148	MGP_CAROLIEiJ_G0032280	Edc3	95	98.148	Mus_caroli
ENSPCAG00000002802	EDC3	88	98.148	ENSMUSG00000038957	Edc3	95	98.148	Mus_musculus
ENSPCAG00000002802	EDC3	88	98.148	MGP_PahariEiJ_G0015146	Edc3	95	98.148	Mus_pahari
ENSPCAG00000002802	EDC3	88	98.148	MGP_SPRETEiJ_G0033420	Edc3	95	98.148	Mus_spretus
ENSPCAG00000002802	EDC3	88	98.148	ENSMPUG00000017293	EDC3	88	98.148	Mustela_putorius_furo
ENSPCAG00000002802	EDC3	88	100.000	ENSMLUG00000016382	EDC3	88	100.000	Myotis_lucifugus
ENSPCAG00000002802	EDC3	88	98.148	ENSNGAG00000010923	Edc3	88	98.148	Nannospalax_galili
ENSPCAG00000002802	EDC3	78	77.778	ENSNBRG00000007881	EDC3	84	77.778	Neolamprologus_brichardi
ENSPCAG00000002802	EDC3	88	81.481	ENSNBRG00000002434	edc3	93	81.481	Neolamprologus_brichardi
ENSPCAG00000002802	EDC3	88	100.000	ENSNLEG00000014577	EDC3	87	100.000	Nomascus_leucogenys
ENSPCAG00000002802	EDC3	88	96.296	ENSMEUG00000009077	EDC3	88	96.296	Notamacropus_eugenii
ENSPCAG00000002802	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSPCAG00000002802	EDC3	87	77.778	ENSONIG00000002932	-	88	77.778	Oreochromis_niloticus
ENSPCAG00000002802	EDC3	88	81.481	ENSONIG00000008434	edc3	93	81.481	Oreochromis_niloticus
ENSPCAG00000002802	EDC3	66	96.296	ENSOCUG00000017740	EDC3	73	96.296	Oryctolagus_cuniculus
ENSPCAG00000002802	EDC3	88	77.778	ENSORLG00000004883	edc3	93	77.778	Oryzias_latipes
ENSPCAG00000002802	EDC3	80	74.074	ENSORLG00000014399	-	85	74.074	Oryzias_latipes
ENSPCAG00000002802	EDC3	80	74.074	ENSORLG00020019446	-	87	74.074	Oryzias_latipes_hni
ENSPCAG00000002802	EDC3	88	77.778	ENSORLG00020012262	edc3	93	77.778	Oryzias_latipes_hni
ENSPCAG00000002802	EDC3	80	72.222	ENSORLG00015017635	-	83	72.222	Oryzias_latipes_hsok
ENSPCAG00000002802	EDC3	88	77.778	ENSORLG00015005634	edc3	93	77.778	Oryzias_latipes_hsok
ENSPCAG00000002802	EDC3	88	77.778	ENSOMEG00000014026	edc3	93	77.778	Oryzias_melastigma
ENSPCAG00000002802	EDC3	80	74.074	ENSOMEG00000017354	EDC3	87	74.074	Oryzias_melastigma
ENSPCAG00000002802	EDC3	88	100.000	ENSOGAG00000014441	EDC3	88	100.000	Otolemur_garnettii
ENSPCAG00000002802	EDC3	88	100.000	ENSOARG00000003476	EDC3	88	100.000	Ovis_aries
ENSPCAG00000002802	EDC3	88	100.000	ENSPPAG00000040143	EDC3	88	100.000	Pan_paniscus
ENSPCAG00000002802	EDC3	88	98.148	ENSPPRG00000006257	EDC3	88	98.148	Panthera_pardus
ENSPCAG00000002802	EDC3	88	98.148	ENSPTIG00000017424	EDC3	88	98.148	Panthera_tigris_altaica
ENSPCAG00000002802	EDC3	88	100.000	ENSPTRG00000007279	EDC3	88	100.000	Pan_troglodytes
ENSPCAG00000002802	EDC3	88	100.000	ENSPANG00000015997	EDC3	88	100.000	Papio_anubis
ENSPCAG00000002802	EDC3	88	73.232	ENSPKIG00000019810	EDC3	91	73.232	Paramormyrops_kingsleyae
ENSPCAG00000002802	EDC3	88	83.333	ENSPKIG00000004416	edc3	89	83.333	Paramormyrops_kingsleyae
ENSPCAG00000002802	EDC3	88	94.444	ENSPSIG00000008474	EDC3	87	94.444	Pelodiscus_sinensis
ENSPCAG00000002802	EDC3	84	81.481	ENSPMGG00000007223	edc3	93	81.481	Periophthalmus_magnuspinnatus
ENSPCAG00000002802	EDC3	88	96.692	ENSPEMG00000015260	Edc3	88	96.692	Peromyscus_maniculatus_bairdii
ENSPCAG00000002802	EDC3	88	98.148	ENSPCIG00000006276	EDC3	62	98.148	Phascolarctos_cinereus
ENSPCAG00000002802	EDC3	88	79.630	ENSPFOG00000012204	edc3	93	79.630	Poecilia_formosa
ENSPCAG00000002802	EDC3	88	79.630	ENSPLAG00000014420	edc3	93	79.630	Poecilia_latipinna
ENSPCAG00000002802	EDC3	88	79.630	ENSPMEG00000023289	edc3	93	79.630	Poecilia_mexicana
ENSPCAG00000002802	EDC3	88	79.630	ENSPREG00000016022	edc3	93	79.630	Poecilia_reticulata
ENSPCAG00000002802	EDC3	88	100.000	ENSPPYG00000006642	EDC3	88	100.000	Pongo_abelii
ENSPCAG00000002802	EDC3	88	100.000	ENSPCOG00000013364	EDC3	88	100.000	Propithecus_coquereli
ENSPCAG00000002802	EDC3	88	100.000	ENSPVAG00000014733	EDC3	88	100.000	Pteropus_vampyrus
ENSPCAG00000002802	EDC3	82	77.778	ENSPNYG00000009669	EDC3	90	77.778	Pundamilia_nyererei
ENSPCAG00000002802	EDC3	88	81.481	ENSPNYG00000021797	edc3	93	81.481	Pundamilia_nyererei
ENSPCAG00000002802	EDC3	88	81.481	ENSPNAG00000019657	edc3	89	81.481	Pygocentrus_nattereri
ENSPCAG00000002802	EDC3	87	100.000	ENSRNOG00000019579	Edc3	88	100.000	Rattus_norvegicus
ENSPCAG00000002802	EDC3	88	100.000	ENSRBIG00000019488	EDC3	88	100.000	Rhinopithecus_bieti
ENSPCAG00000002802	EDC3	88	100.000	ENSRROG00000034959	EDC3	88	100.000	Rhinopithecus_roxellana
ENSPCAG00000002802	EDC3	88	100.000	ENSSBOG00000004896	EDC3	88	100.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000002802	EDC3	84	98.148	ENSSHAG00000015075	EDC3	83	98.148	Sarcophilus_harrisii
ENSPCAG00000002802	EDC3	88	81.481	ENSSFOG00015016939	edc3	89	81.481	Scleropages_formosus
ENSPCAG00000002802	EDC3	79	81.481	ENSSFOG00015002439	edc3	87	81.481	Scleropages_formosus
ENSPCAG00000002802	EDC3	78	72.222	ENSSMAG00000010176	-	85	72.222	Scophthalmus_maximus
ENSPCAG00000002802	EDC3	88	77.778	ENSSMAG00000010695	edc3	93	77.778	Scophthalmus_maximus
ENSPCAG00000002802	EDC3	88	79.630	ENSSDUG00000021844	edc3	93	79.630	Seriola_dumerili
ENSPCAG00000002802	EDC3	79	77.778	ENSSDUG00000007671	EDC3	86	77.778	Seriola_dumerili
ENSPCAG00000002802	EDC3	88	79.630	ENSSLDG00000022046	edc3	93	79.630	Seriola_lalandi_dorsalis
ENSPCAG00000002802	EDC3	68	95.968	ENSSARG00000003907	EDC3	69	95.968	Sorex_araneus
ENSPCAG00000002802	EDC3	88	98.148	ENSSPUG00000008232	EDC3	88	98.148	Sphenodon_punctatus
ENSPCAG00000002802	EDC3	80	77.778	ENSSPAG00000020327	EDC3	87	77.778	Stegastes_partitus
ENSPCAG00000002802	EDC3	88	81.481	ENSSPAG00000010009	edc3	93	81.481	Stegastes_partitus
ENSPCAG00000002802	EDC3	88	100.000	ENSSSCG00000001903	EDC3	92	100.000	Sus_scrofa
ENSPCAG00000002802	EDC3	88	98.148	ENSTGUG00000004007	EDC3	88	98.148	Taeniopygia_guttata
ENSPCAG00000002802	EDC3	88	77.778	ENSTRUG00000017078	edc3	94	77.778	Takifugu_rubripes
ENSPCAG00000002802	EDC3	84	77.778	ENSTNIG00000016047	edc3	89	77.778	Tetraodon_nigroviridis
ENSPCAG00000002802	EDC3	88	98.148	ENSTTRG00000007990	EDC3	88	98.148	Tursiops_truncatus
ENSPCAG00000002802	EDC3	88	98.148	ENSUAMG00000026710	-	88	98.148	Ursus_americanus
ENSPCAG00000002802	EDC3	88	98.148	ENSUMAG00000005006	EDC3	84	98.148	Ursus_maritimus
ENSPCAG00000002802	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSPCAG00000002802	EDC3	88	100.000	ENSVVUG00000018601	EDC3	88	100.000	Vulpes_vulpes
ENSPCAG00000002802	EDC3	68	81.609	ENSXETG00000010622	edc3	99	82.759	Xenopus_tropicalis
ENSPCAG00000002802	EDC3	88	79.630	ENSXMAG00000007377	edc3	93	79.630	Xiphophorus_maculatus