EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000002956 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 11903 bases
Position: chrGeneScaffold_2711:50031-61933
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000002761	PAP_assoc	PF03828.19	3.7e-05	1	1
ENSPCAP00000002761	RRM_1	PF00076.22	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000002935	-	2535	-	ENSPCAP00000002761	844 (aa)	-	UPI00018AE8CD

Gene Model

Click here to download ENSPCAG00000002956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000002956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000002956	-	99	84.634	ENSG00000149016	TUT1	97	84.634	Homo_sapiens
ENSPCAG00000002956	-	88	45.972	ENSAPOG00000016423	tut1	57	51.493	Acanthochromis_polyacanthus
ENSPCAG00000002956	-	100	84.634	ENSAMEG00000006723	-	97	83.806	Ailuropoda_melanoleuca
ENSPCAG00000002956	-	66	52.899	ENSACIG00000000948	tut1	57	53.160	Amphilophus_citrinellus
ENSPCAG00000002956	-	68	51.449	ENSAOCG00000021912	tut1	57	51.673	Amphiprion_ocellaris
ENSPCAG00000002956	-	68	51.449	ENSAPEG00000005144	tut1	59	51.673	Amphiprion_percula
ENSPCAG00000002956	-	75	46.445	ENSATEG00000014590	tut1	64	46.073	Anabas_testudineus
ENSPCAG00000002956	-	99	84.988	ENSANAG00000029063	-	97	84.988	Aotus_nancymaae
ENSPCAG00000002956	-	86	48.469	ENSACLG00000013406	tut1	57	50.558	Astatotilapia_calliptera
ENSPCAG00000002956	-	88	47.418	ENSAMXG00000042139	tut1	58	48.889	Astyanax_mexicanus
ENSPCAG00000002956	-	100	84.770	ENSBTAG00000011846	TUT1	97	84.888	Bos_taurus
ENSPCAG00000002956	-	99	83.924	ENSCJAG00000033294	-	97	84.397	Callithrix_jacchus
ENSPCAG00000002956	-	100	83.255	ENSCAFG00000015822	TUT1	97	82.429	Canis_familiaris
ENSPCAG00000002956	-	100	83.255	ENSCAFG00020013039	-	97	82.429	Canis_lupus_dingo
ENSPCAG00000002956	-	100	84.534	ENSCHIG00000006765	-	97	83.589	Capra_hircus
ENSPCAG00000002956	-	100	79.929	ENSTSYG00000000147	-	93	78.867	Carlito_syrichta
ENSPCAG00000002956	-	81	79.100	ENSCAPG00000013001	-	99	79.100	Cavia_aperea
ENSPCAG00000002956	-	100	74.205	ENSCPOG00000014281	-	97	74.087	Cavia_porcellus
ENSPCAG00000002956	-	99	85.225	ENSCCAG00000018819	-	93	85.225	Cebus_capucinus
ENSPCAG00000002956	-	99	84.988	ENSCATG00000036770	-	93	85.106	Cercocebus_atys
ENSPCAG00000002956	-	100	72.544	ENSCLAG00000000215	-	97	73.018	Chinchilla_lanigera
ENSPCAG00000002956	-	93	84.391	ENSCSAG00000006566	-	99	84.518	Chlorocebus_sabaeus
ENSPCAG00000002956	-	73	76.386	ENSCHOG00000007746	-	69	76.867	Choloepus_hoffmanni
ENSPCAG00000002956	-	89	57.328	ENSCPBG00000017909	-	75	61.579	Chrysemys_picta_bellii
ENSPCAG00000002956	-	99	84.806	ENSCANG00000043244	-	93	84.923	Colobus_angolensis_palliatus
ENSPCAG00000002956	-	100	74.148	ENSCGRG00001017583	Tut1	97	74.148	Cricetulus_griseus_chok1gshd
ENSPCAG00000002956	-	100	74.148	ENSCGRG00000015008	Tut1	97	74.148	Cricetulus_griseus_crigri
ENSPCAG00000002956	-	69	49.492	ENSCSEG00000012807	tut1	58	51.301	Cynoglossus_semilaevis
ENSPCAG00000002956	-	75	46.890	ENSCVAG00000005396	tut1	64	46.561	Cyprinodon_variegatus
ENSPCAG00000002956	-	88	49.289	ENSDARG00000057321	tut1	58	50.000	Danio_rerio
ENSPCAG00000002956	-	100	85.089	ENSDNOG00000038908	-	97	85.089	Dasypus_novemcinctus
ENSPCAG00000002956	-	100	80.307	ENSDORG00000004018	Tut1	95	80.307	Dipodomys_ordii
ENSPCAG00000002956	-	99	36.425	ENSEBUG00000014170	tut1	61	43.684	Eptatretus_burgeri
ENSPCAG00000002956	-	100	84.416	ENSEASG00005007531	-	97	85.714	Equus_asinus_asinus
ENSPCAG00000002956	-	100	84.534	ENSECAG00000009471	-	95	85.832	Equus_caballus
ENSPCAG00000002956	-	99	77.633	ENSEEUG00000001238	-	97	77.633	Erinaceus_europaeus
ENSPCAG00000002956	-	99	35.045	ENSELUG00000011532	tut1	57	50.566	Esox_lucius
ENSPCAG00000002956	-	100	84.179	ENSFCAG00000008859	-	93	84.416	Felis_catus
ENSPCAG00000002956	-	91	74.569	ENSFDAG00000021131	-	96	73.563	Fukomys_damarensis
ENSPCAG00000002956	-	93	47.368	ENSFHEG00000006279	tut1	64	47.090	Fundulus_heteroclitus
ENSPCAG00000002956	-	84	40.930	ENSGMOG00000013378	tut1	73	41.058	Gadus_morhua
ENSPCAG00000002956	-	70	48.308	ENSGACG00000009956	tut1	58	52.652	Gasterosteus_aculeatus
ENSPCAG00000002956	-	87	48.950	ENSGAGG00000007912	-	85	50.615	Gopherus_agassizii
ENSPCAG00000002956	-	99	84.634	ENSGGOG00000013564	-	93	84.634	Gorilla_gorilla
ENSPCAG00000002956	-	86	47.959	ENSHBUG00000022855	tut1	57	50.186	Haplochromis_burtoni
ENSPCAG00000002956	-	100	72.674	ENSHGLG00000002742	-	97	73.734	Heterocephalus_glaber_female
ENSPCAG00000002956	-	100	72.098	ENSHGLG00100017588	-	97	73.271	Heterocephalus_glaber_male
ENSPCAG00000002956	-	67	42.222	ENSHCOG00000016358	tut1	64	42.114	Hippocampus_comes
ENSPCAG00000002956	-	86	50.754	ENSIPUG00000017671	tut1	58	51.852	Ictalurus_punctatus
ENSPCAG00000002956	-	99	84.198	ENSSTOG00000002859	-	97	84.198	Ictidomys_tridecemlineatus
ENSPCAG00000002956	-	100	80.212	ENSJJAG00000022329	Tut1	97	81.390	Jaculus_jaculus
ENSPCAG00000002956	-	80	42.105	ENSKMAG00000010023	tut1	57	51.301	Kryptolebias_marmoratus
ENSPCAG00000002956	-	70	47.619	ENSLBEG00000014969	tut1	64	44.514	Labrus_bergylta
ENSPCAG00000002956	-	80	45.312	ENSLACG00000011278	tut1	81	45.439	Latimeria_chalumnae
ENSPCAG00000002956	-	87	51.675	ENSLOCG00000013105	tut1	70	56.107	Lepisosteus_oculatus
ENSPCAG00000002956	-	100	90.284	ENSLAFG00000003340	-	97	90.284	Loxodonta_africana
ENSPCAG00000002956	-	99	85.106	ENSMFAG00000000912	-	93	85.225	Macaca_fascicularis
ENSPCAG00000002956	-	99	84.752	ENSMMUG00000006595	-	93	84.870	Macaca_mulatta
ENSPCAG00000002956	-	99	84.988	ENSMNEG00000029841	-	93	85.106	Macaca_nemestrina
ENSPCAG00000002956	-	99	84.988	ENSMLEG00000040498	-	93	85.106	Mandrillus_leucophaeus
ENSPCAG00000002956	-	88	46.411	ENSMAMG00000008173	tut1	64	46.708	Mastacembelus_armatus
ENSPCAG00000002956	-	86	48.469	ENSMZEG00005009777	tut1	57	50.558	Maylandia_zebra
ENSPCAG00000002956	-	90	86.275	ENSMAUG00000012453	Tut1	96	84.615	Mesocricetus_auratus
ENSPCAG00000002956	-	99	83.669	ENSMICG00000009841	-	93	83.787	Microcebus_murinus
ENSPCAG00000002956	-	100	74.383	ENSMOCG00000015834	Tut1	97	74.383	Microtus_ochrogaster
ENSPCAG00000002956	-	82	48.990	ENSMMOG00000002589	tut1	64	47.340	Mola_mola
ENSPCAG00000002956	-	99	67.176	ENSMODG00000007710	-	96	67.371	Monodelphis_domestica
ENSPCAG00000002956	-	67	51.254	ENSMALG00000003624	tut1	57	51.471	Monopterus_albus
ENSPCAG00000002956	-	100	73.882	MGP_CAROLIEiJ_G0022670	Tut1	97	74.000	Mus_caroli
ENSPCAG00000002956	-	100	73.505	ENSMUSG00000071645	Tut1	97	74.560	Mus_musculus
ENSPCAG00000002956	-	100	75.441	MGP_PahariEiJ_G0014164	Tut1	97	75.441	Mus_pahari
ENSPCAG00000002956	-	100	73.271	MGP_SPRETEiJ_G0023583	Tut1	97	74.326	Mus_spretus
ENSPCAG00000002956	-	100	83.353	ENSMPUG00000013938	-	97	82.645	Mustela_putorius_furo
ENSPCAG00000002956	-	100	71.074	ENSMLUG00000000349	-	97	71.429	Myotis_lucifugus
ENSPCAG00000002956	-	100	79.695	ENSNGAG00000002988	Tut1	97	78.991	Nannospalax_galili
ENSPCAG00000002956	-	66	50.362	ENSNBRG00000022055	tut1	57	50.558	Neolamprologus_brichardi
ENSPCAG00000002956	-	99	84.515	ENSNLEG00000003780	-	93	84.515	Nomascus_leucogenys
ENSPCAG00000002956	-	91	77.468	ENSMEUG00000012756	-	88	77.468	Notamacropus_eugenii
ENSPCAG00000002956	-	69	86.667	ENSOPRG00000011835	-	74	85.766	Ochotona_princeps
ENSPCAG00000002956	-	99	71.158	ENSODEG00000002204	-	97	71.158	Octodon_degus
ENSPCAG00000002956	-	93	47.596	ENSONIG00000019913	tut1	64	47.340	Oreochromis_niloticus
ENSPCAG00000002956	-	55	71.584	ENSOANG00000012458	-	91	71.584	Ornithorhynchus_anatinus
ENSPCAG00000002956	-	99	84.043	ENSOCUG00000017215	-	93	84.279	Oryctolagus_cuniculus
ENSPCAG00000002956	-	73	46.193	ENSOMEG00000005129	tut1	58	51.321	Oryzias_melastigma
ENSPCAG00000002956	-	100	82.938	ENSOGAG00000000828	-	97	81.872	Otolemur_garnettii
ENSPCAG00000002956	-	100	80.747	ENSOARG00000015269	-	97	80.863	Ovis_aries
ENSPCAG00000002956	-	99	84.988	ENSPPAG00000037200	-	93	84.988	Pan_paniscus
ENSPCAG00000002956	-	100	84.770	ENSPPRG00000000257	-	97	85.006	Panthera_pardus
ENSPCAG00000002956	-	100	84.770	ENSPTIG00000017573	-	93	85.006	Panthera_tigris_altaica
ENSPCAG00000002956	-	99	84.752	ENSPTRG00000003770	TUT1	93	84.752	Pan_troglodytes
ENSPCAG00000002956	-	89	82.048	ENSPANG00000010908	-	89	82.000	Papio_anubis
ENSPCAG00000002956	-	99	36.013	ENSPKIG00000022062	tut1	59	49.468	Paramormyrops_kingsleyae
ENSPCAG00000002956	-	99	44.394	ENSPSIG00000004972	-	80	53.229	Pelodiscus_sinensis
ENSPCAG00000002956	-	61	45.933	ENSPMGG00000004299	tut1	77	44.974	Periophthalmus_magnuspinnatus
ENSPCAG00000002956	-	100	75.088	ENSPEMG00000018332	Tut1	97	74.501	Peromyscus_maniculatus_bairdii
ENSPCAG00000002956	-	64	49.827	ENSPMAG00000005825	tut1	78	50.177	Petromyzon_marinus
ENSPCAG00000002956	-	100	63.882	ENSPCIG00000017805	-	96	64.353	Phascolarctos_cinereus
ENSPCAG00000002956	-	73	45.794	ENSPFOG00000016195	tut1	65	45.541	Poecilia_formosa
ENSPCAG00000002956	-	73	45.794	ENSPLAG00000022064	tut1	65	45.541	Poecilia_latipinna
ENSPCAG00000002956	-	74	46.106	ENSPMEG00000019175	tut1	65	45.860	Poecilia_mexicana
ENSPCAG00000002956	-	68	50.185	ENSPREG00000020464	tut1	58	50.379	Poecilia_reticulata
ENSPCAG00000002956	-	99	84.615	ENSPPYG00000003162	-	97	84.615	Pongo_abelii
ENSPCAG00000002956	-	99	82.670	ENSPCOG00000017464	-	94	82.787	Propithecus_coquereli
ENSPCAG00000002956	-	85	87.041	ENSPVAG00000003444	-	82	87.041	Pteropus_vampyrus
ENSPCAG00000002956	-	91	47.449	ENSPNYG00000018764	tut1	57	50.558	Pundamilia_nyererei
ENSPCAG00000002956	-	74	52.041	ENSPNAG00000011889	tut1	61	50.532	Pygocentrus_nattereri
ENSPCAG00000002956	-	100	75.088	ENSRNOG00000020047	Tut1	97	75.088	Rattus_norvegicus
ENSPCAG00000002956	-	99	85.159	ENSRBIG00000021240	-	93	85.277	Rhinopithecus_bieti
ENSPCAG00000002956	-	99	85.159	ENSRROG00000043315	-	97	85.277	Rhinopithecus_roxellana
ENSPCAG00000002956	-	99	84.870	ENSSBOG00000003827	-	97	84.870	Saimiri_boliviensis_boliviensis
ENSPCAG00000002956	-	99	66.392	ENSSHAG00000003368	-	99	66.510	Sarcophilus_harrisii
ENSPCAG00000002956	-	76	53.807	ENSSFOG00015005639	tut1	59	52.406	Scleropages_formosus
ENSPCAG00000002956	-	86	45.729	ENSSMAG00000011449	tut1	57	50.929	Scophthalmus_maximus
ENSPCAG00000002956	-	85	46.561	ENSSDUG00000003613	tut1	58	50.186	Seriola_dumerili
ENSPCAG00000002956	-	85	46.561	ENSSLDG00000022487	tut1	57	50.558	Seriola_lalandi_dorsalis
ENSPCAG00000002956	-	86	53.535	ENSSPUG00000008143	-	78	42.395	Sphenodon_punctatus
ENSPCAG00000002956	-	86	48.731	ENSSPAG00000023390	tut1	57	52.788	Stegastes_partitus
ENSPCAG00000002956	-	88	83.578	ENSSSCG00000013063	-	100	82.328	Sus_scrofa
ENSPCAG00000002956	-	80	44.712	ENSTRUG00000016451	tut1	64	47.077	Takifugu_rubripes
ENSPCAG00000002956	-	72	43.464	ENSTNIG00000012852	tut1	95	43.464	Tetraodon_nigroviridis
ENSPCAG00000002956	-	100	81.087	ENSTTRG00000002460	-	97	81.206	Tursiops_truncatus
ENSPCAG00000002956	-	100	83.924	ENSUAMG00000027237	-	97	83.097	Ursus_americanus
ENSPCAG00000002956	-	100	83.924	ENSUMAG00000012710	-	97	83.097	Ursus_maritimus
ENSPCAG00000002956	-	76	85.559	ENSVPAG00000005413	-	96	85.559	Vicugna_pacos
ENSPCAG00000002956	-	100	83.608	ENSVVUG00000029882	-	97	82.783	Vulpes_vulpes
ENSPCAG00000002956	-	99	38.134	ENSXETG00000005640	tut1	96	37.341	Xenopus_tropicalis
ENSPCAG00000002956	-	51	41.435	ENSXCOG00000017824	tut1	67	61.207	Xiphophorus_couchianus
ENSPCAG00000002956	-	74	46.417	ENSXMAG00000027272	tut1	65	46.178	Xiphophorus_maculatus