EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000003266 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 24652 bases
Position: chrGeneScaffold_6536:62114-86765
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003084	PRP21_like_P	PF12230.8	1.8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003284	SF3A1-201	2382	-	ENSPCAP00000003084	793 (aa)	-	UPI00018AFA7E

Gene Model

Click here to download ENSPCAG00000003266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003266	SF3A1	57	99.528	ENSG00000099995	SF3A1	69	100.000	Homo_sapiens
ENSPCAG00000003266	SF3A1	57	84.286	ENSAPOG00000020465	sf3a1	58	84.711	Acanthochromis_polyacanthus
ENSPCAG00000003266	SF3A1	57	99.057	ENSAMEG00000007737	SF3A1	57	99.057	Ailuropoda_melanoleuca
ENSPCAG00000003266	SF3A1	57	84.711	ENSACIG00000020672	sf3a1	58	84.711	Amphilophus_citrinellus
ENSPCAG00000003266	SF3A1	57	84.762	ENSAOCG00000003060	sf3a1	58	84.762	Amphiprion_ocellaris
ENSPCAG00000003266	SF3A1	57	84.762	ENSAPEG00000010735	sf3a1	58	84.762	Amphiprion_percula
ENSPCAG00000003266	SF3A1	56	85.437	ENSATEG00000021201	sf3a1	57	85.377	Anabas_testudineus
ENSPCAG00000003266	SF3A1	56	96.266	ENSAPLG00000009057	SF3A1	59	96.266	Anas_platyrhynchos
ENSPCAG00000003266	SF3A1	57	92.823	ENSACAG00000009415	SF3A1	57	92.958	Anolis_carolinensis
ENSPCAG00000003266	SF3A1	57	100.000	ENSANAG00000032045	SF3A1	57	100.000	Aotus_nancymaae
ENSPCAG00000003266	SF3A1	57	85.537	ENSACLG00000012622	sf3a1	58	85.537	Astatotilapia_calliptera
ENSPCAG00000003266	SF3A1	56	82.645	ENSAMXG00000005382	sf3a1	58	82.645	Astyanax_mexicanus
ENSPCAG00000003266	SF3A1	57	99.057	ENSBTAG00000003390	SF3A1	57	99.057	Bos_taurus
ENSPCAG00000003266	SF3A1	57	99.528	ENSCJAG00000010370	SF3A1	57	99.528	Callithrix_jacchus
ENSPCAG00000003266	SF3A1	57	99.057	ENSCAFG00000012559	SF3A1	57	99.057	Canis_familiaris
ENSPCAG00000003266	SF3A1	57	99.057	ENSCAFG00020000838	SF3A1	57	99.057	Canis_lupus_dingo
ENSPCAG00000003266	SF3A1	57	99.057	ENSCHIG00000018642	SF3A1	58	99.057	Capra_hircus
ENSPCAG00000003266	SF3A1	57	99.528	ENSTSYG00000004739	SF3A1	57	99.528	Carlito_syrichta
ENSPCAG00000003266	SF3A1	54	84.783	ENSCAPG00000015414	SF3A1	59	92.237	Cavia_aperea
ENSPCAG00000003266	SF3A1	57	99.057	ENSCPOG00000014589	SF3A1	57	99.057	Cavia_porcellus
ENSPCAG00000003266	SF3A1	57	100.000	ENSCCAG00000032006	SF3A1	57	100.000	Cebus_capucinus
ENSPCAG00000003266	SF3A1	57	99.528	ENSCATG00000029241	SF3A1	57	99.528	Cercocebus_atys
ENSPCAG00000003266	SF3A1	57	98.585	ENSCLAG00000006508	SF3A1	57	98.585	Chinchilla_lanigera
ENSPCAG00000003266	SF3A1	57	99.528	ENSCSAG00000009470	SF3A1	57	99.528	Chlorocebus_sabaeus
ENSPCAG00000003266	SF3A1	57	97.510	ENSCPBG00000007595	SF3A1	57	97.510	Chrysemys_picta_bellii
ENSPCAG00000003266	SF3A1	56	46.411	ENSCSAVG00000005608	-	53	62.712	Ciona_savignyi
ENSPCAG00000003266	SF3A1	57	99.528	ENSCANG00000033564	SF3A1	57	99.528	Colobus_angolensis_palliatus
ENSPCAG00000003266	SF3A1	57	98.340	ENSCGRG00001008933	Sf3a1	57	98.340	Cricetulus_griseus_chok1gshd
ENSPCAG00000003266	SF3A1	57	98.340	ENSCGRG00000006127	Sf3a1	57	98.340	Cricetulus_griseus_crigri
ENSPCAG00000003266	SF3A1	57	82.231	ENSCSEG00000010792	sf3a1	58	82.231	Cynoglossus_semilaevis
ENSPCAG00000003266	SF3A1	57	83.058	ENSCVAG00000004560	sf3a1	58	83.058	Cyprinodon_variegatus
ENSPCAG00000003266	SF3A1	57	84.298	ENSDARG00000041887	sf3a1	58	84.298	Danio_rerio
ENSPCAG00000003266	SF3A1	57	99.528	ENSDNOG00000010629	SF3A1	57	99.528	Dasypus_novemcinctus
ENSPCAG00000003266	SF3A1	57	99.528	ENSDORG00000005613	Sf3a1	57	99.528	Dipodomys_ordii
ENSPCAG00000003266	SF3A1	57	63.063	ENSEBUG00000001285	sf3a1	58	65.056	Eptatretus_burgeri
ENSPCAG00000003266	SF3A1	57	99.057	ENSEASG00005010254	SF3A1	57	99.057	Equus_asinus_asinus
ENSPCAG00000003266	SF3A1	57	99.057	ENSECAG00000023962	SF3A1	57	99.057	Equus_caballus
ENSPCAG00000003266	SF3A1	57	82.716	ENSELUG00000022578	sf3a1	58	82.305	Esox_lucius
ENSPCAG00000003266	SF3A1	57	98.585	ENSFCAG00000011932	SF3A1	57	98.585	Felis_catus
ENSPCAG00000003266	SF3A1	56	95.021	ENSFALG00000006944	SF3A1	57	95.021	Ficedula_albicollis
ENSPCAG00000003266	SF3A1	57	99.057	ENSFDAG00000009560	SF3A1	57	99.057	Fukomys_damarensis
ENSPCAG00000003266	SF3A1	57	83.884	ENSFHEG00000010866	sf3a1	57	83.884	Fundulus_heteroclitus
ENSPCAG00000003266	SF3A1	57	83.884	ENSGMOG00000016024	sf3a1	58	83.471	Gadus_morhua
ENSPCAG00000003266	SF3A1	56	95.851	ENSGALG00000007937	SF3A1	57	95.851	Gallus_gallus
ENSPCAG00000003266	SF3A1	57	83.471	ENSGAFG00000009111	sf3a1	58	83.471	Gambusia_affinis
ENSPCAG00000003266	SF3A1	57	83.471	ENSGACG00000011893	sf3a1	58	83.471	Gasterosteus_aculeatus
ENSPCAG00000003266	SF3A1	53	97.510	ENSGAGG00000000762	SF3A1	55	97.510	Gopherus_agassizii
ENSPCAG00000003266	SF3A1	57	99.528	ENSGGOG00000012631	SF3A1	57	99.528	Gorilla_gorilla
ENSPCAG00000003266	SF3A1	57	85.537	ENSHBUG00000015795	sf3a1	58	85.537	Haplochromis_burtoni
ENSPCAG00000003266	SF3A1	57	99.057	ENSHGLG00000007907	SF3A1	57	99.057	Heterocephalus_glaber_female
ENSPCAG00000003266	SF3A1	57	99.057	ENSHGLG00100013799	SF3A1	57	99.057	Heterocephalus_glaber_male
ENSPCAG00000003266	SF3A1	57	81.405	ENSHCOG00000015423	sf3a1	58	80.992	Hippocampus_comes
ENSPCAG00000003266	SF3A1	57	81.405	ENSIPUG00000002470	sf3a1	59	81.405	Ictalurus_punctatus
ENSPCAG00000003266	SF3A1	57	99.057	ENSSTOG00000013892	SF3A1	57	99.057	Ictidomys_tridecemlineatus
ENSPCAG00000003266	SF3A1	57	99.057	ENSJJAG00000022566	Sf3a1	57	99.057	Jaculus_jaculus
ENSPCAG00000003266	SF3A1	57	84.711	ENSKMAG00000002400	sf3a1	58	84.711	Kryptolebias_marmoratus
ENSPCAG00000003266	SF3A1	57	83.471	ENSLBEG00000022974	sf3a1	58	83.471	Labrus_bergylta
ENSPCAG00000003266	SF3A1	57	86.603	ENSLACG00000003565	SF3A1	57	88.843	Latimeria_chalumnae
ENSPCAG00000003266	SF3A1	56	85.124	ENSLOCG00000008251	sf3a1	58	85.124	Lepisosteus_oculatus
ENSPCAG00000003266	SF3A1	57	64.050	ENSLAFG00000026032	-	58	64.050	Loxodonta_africana
ENSPCAG00000003266	SF3A1	57	100.000	ENSLAFG00000000448	SF3A1	57	100.000	Loxodonta_africana
ENSPCAG00000003266	SF3A1	57	99.528	ENSMFAG00000031979	SF3A1	57	99.528	Macaca_fascicularis
ENSPCAG00000003266	SF3A1	57	99.528	ENSMMUG00000005547	SF3A1	69	100.000	Macaca_mulatta
ENSPCAG00000003266	SF3A1	57	99.528	ENSMNEG00000037229	SF3A1	57	99.528	Macaca_nemestrina
ENSPCAG00000003266	SF3A1	57	99.528	ENSMLEG00000041908	SF3A1	57	99.528	Mandrillus_leucophaeus
ENSPCAG00000003266	SF3A1	57	85.537	ENSMAMG00000006460	sf3a1	58	85.537	Mastacembelus_armatus
ENSPCAG00000003266	SF3A1	57	85.537	ENSMZEG00005009633	sf3a1	58	85.537	Maylandia_zebra
ENSPCAG00000003266	SF3A1	56	95.851	ENSMGAG00000001330	SF3A1	59	95.851	Meleagris_gallopavo
ENSPCAG00000003266	SF3A1	57	98.755	ENSMAUG00000020317	Sf3a1	60	98.755	Mesocricetus_auratus
ENSPCAG00000003266	SF3A1	57	100.000	ENSMICG00000010038	SF3A1	57	100.000	Microcebus_murinus
ENSPCAG00000003266	SF3A1	57	99.170	ENSMOCG00000008438	Sf3a1	57	99.170	Microtus_ochrogaster
ENSPCAG00000003266	SF3A1	57	85.537	ENSMMOG00000015588	sf3a1	59	85.537	Mola_mola
ENSPCAG00000003266	SF3A1	57	97.642	ENSMODG00000009270	SF3A1	57	97.642	Monodelphis_domestica
ENSPCAG00000003266	SF3A1	56	84.298	ENSMALG00000000148	sf3a1	61	84.298	Monopterus_albus
ENSPCAG00000003266	SF3A1	57	97.642	MGP_CAROLIEiJ_G0016029	Sf3a1	57	97.642	Mus_caroli
ENSPCAG00000003266	SF3A1	57	97.642	ENSMUSG00000002129	Sf3a1	57	97.642	Mus_musculus
ENSPCAG00000003266	SF3A1	57	97.642	MGP_PahariEiJ_G0016862	Sf3a1	57	97.642	Mus_pahari
ENSPCAG00000003266	SF3A1	57	97.642	MGP_SPRETEiJ_G0016870	Sf3a1	57	97.642	Mus_spretus
ENSPCAG00000003266	SF3A1	57	99.057	ENSMPUG00000013144	SF3A1	57	99.057	Mustela_putorius_furo
ENSPCAG00000003266	SF3A1	57	98.585	ENSMLUG00000002139	SF3A1	57	98.585	Myotis_lucifugus
ENSPCAG00000003266	SF3A1	57	99.057	ENSNGAG00000016977	Sf3a1	57	99.057	Nannospalax_galili
ENSPCAG00000003266	SF3A1	57	85.537	ENSNBRG00000016642	sf3a1	58	85.537	Neolamprologus_brichardi
ENSPCAG00000003266	SF3A1	57	99.528	ENSNLEG00000003686	SF3A1	57	99.528	Nomascus_leucogenys
ENSPCAG00000003266	SF3A1	57	100.000	ENSOPRG00000016636	SF3A1	57	100.000	Ochotona_princeps
ENSPCAG00000003266	SF3A1	57	99.057	ENSODEG00000002571	SF3A1	57	99.057	Octodon_degus
ENSPCAG00000003266	SF3A1	57	83.810	ENSONIG00000010848	sf3a1	58	85.124	Oreochromis_niloticus
ENSPCAG00000003266	SF3A1	57	99.057	ENSOCUG00000007633	SF3A1	57	99.057	Oryctolagus_cuniculus
ENSPCAG00000003266	SF3A1	53	84.711	ENSORLG00000013050	sf3a1	56	84.711	Oryzias_latipes
ENSPCAG00000003266	SF3A1	56	84.711	ENSORLG00020003236	sf3a1	56	84.711	Oryzias_latipes_hni
ENSPCAG00000003266	SF3A1	57	84.711	ENSORLG00015017411	sf3a1	58	84.711	Oryzias_latipes_hsok
ENSPCAG00000003266	SF3A1	57	84.298	ENSOMEG00000013362	sf3a1	58	84.298	Oryzias_melastigma
ENSPCAG00000003266	SF3A1	57	99.528	ENSOGAG00000012931	SF3A1	57	99.528	Otolemur_garnettii
ENSPCAG00000003266	SF3A1	57	97.095	ENSOARG00000006849	SF3A1	57	97.095	Ovis_aries
ENSPCAG00000003266	SF3A1	57	98.340	ENSPPAG00000041790	SF3A1	57	98.340	Pan_paniscus
ENSPCAG00000003266	SF3A1	57	98.585	ENSPPRG00000004391	SF3A1	57	98.585	Panthera_pardus
ENSPCAG00000003266	SF3A1	57	98.340	ENSPTIG00000000844	SF3A1	59	98.340	Panthera_tigris_altaica
ENSPCAG00000003266	SF3A1	57	99.528	ENSPTRG00000014240	SF3A1	57	99.528	Pan_troglodytes
ENSPCAG00000003266	SF3A1	57	99.528	ENSPANG00000020772	SF3A1	57	99.528	Papio_anubis
ENSPCAG00000003266	SF3A1	56	83.884	ENSPMGG00000023096	sf3a1	60	84.298	Periophthalmus_magnuspinnatus
ENSPCAG00000003266	SF3A1	57	99.170	ENSPEMG00000009494	Sf3a1	57	99.170	Peromyscus_maniculatus_bairdii
ENSPCAG00000003266	SF3A1	57	97.925	ENSPCIG00000022692	SF3A1	57	97.925	Phascolarctos_cinereus
ENSPCAG00000003266	SF3A1	57	83.884	ENSPFOG00000016768	sf3a1	58	83.884	Poecilia_formosa
ENSPCAG00000003266	SF3A1	57	83.884	ENSPLAG00000017268	sf3a1	57	83.884	Poecilia_latipinna
ENSPCAG00000003266	SF3A1	57	84.298	ENSPMEG00000019811	sf3a1	67	84.298	Poecilia_mexicana
ENSPCAG00000003266	SF3A1	57	84.298	ENSPREG00000010347	sf3a1	57	84.298	Poecilia_reticulata
ENSPCAG00000003266	SF3A1	57	99.528	ENSPPYG00000011707	SF3A1	57	99.528	Pongo_abelii
ENSPCAG00000003266	SF3A1	57	99.528	ENSPCOG00000026630	SF3A1	57	99.528	Propithecus_coquereli
ENSPCAG00000003266	SF3A1	57	99.057	ENSPVAG00000017719	SF3A1	57	99.057	Pteropus_vampyrus
ENSPCAG00000003266	SF3A1	57	85.537	ENSPNYG00000018706	sf3a1	58	85.537	Pundamilia_nyererei
ENSPCAG00000003266	SF3A1	56	83.058	ENSPNAG00000003721	sf3a1	58	83.058	Pygocentrus_nattereri
ENSPCAG00000003266	SF3A1	57	97.642	ENSRNOG00000005218	Sf3a1	57	97.642	Rattus_norvegicus
ENSPCAG00000003266	SF3A1	57	99.528	ENSRBIG00000032167	SF3A1	57	99.528	Rhinopithecus_bieti
ENSPCAG00000003266	SF3A1	57	99.528	ENSRROG00000044908	SF3A1	57	99.528	Rhinopithecus_roxellana
ENSPCAG00000003266	SF3A1	57	100.000	ENSSBOG00000021960	SF3A1	69	98.340	Saimiri_boliviensis_boliviensis
ENSPCAG00000003266	SF3A1	57	97.170	ENSSHAG00000003666	SF3A1	57	97.170	Sarcophilus_harrisii
ENSPCAG00000003266	SF3A1	56	85.537	ENSSFOG00015004579	sf3a1	58	85.537	Scleropages_formosus
ENSPCAG00000003266	SF3A1	57	78.512	ENSSMAG00000004275	sf3a1	58	81.818	Scophthalmus_maximus
ENSPCAG00000003266	SF3A1	57	84.762	ENSSDUG00000022219	sf3a1	58	84.762	Seriola_dumerili
ENSPCAG00000003266	SF3A1	57	84.762	ENSSLDG00000012642	sf3a1	58	84.762	Seriola_lalandi_dorsalis
ENSPCAG00000003266	SF3A1	57	99.528	ENSSARG00000005960	SF3A1	59	99.528	Sorex_araneus
ENSPCAG00000003266	SF3A1	57	96.266	ENSSPUG00000018863	SF3A1	58	96.266	Sphenodon_punctatus
ENSPCAG00000003266	SF3A1	57	85.537	ENSSPAG00000011856	sf3a1	58	85.537	Stegastes_partitus
ENSPCAG00000003266	SF3A1	57	99.057	ENSSSCG00000010002	SF3A1	57	99.057	Sus_scrofa
ENSPCAG00000003266	SF3A1	57	96.680	ENSTGUG00000010547	SF3A1	59	96.680	Taeniopygia_guttata
ENSPCAG00000003266	SF3A1	57	81.818	ENSTRUG00000006118	sf3a1	58	81.818	Takifugu_rubripes
ENSPCAG00000003266	SF3A1	53	99.074	ENSTBEG00000012771	SF3A1	54	99.074	Tupaia_belangeri
ENSPCAG00000003266	SF3A1	57	99.528	ENSTTRG00000001535	SF3A1	57	99.528	Tursiops_truncatus
ENSPCAG00000003266	SF3A1	56	98.755	ENSUAMG00000006750	SF3A1	56	98.755	Ursus_americanus
ENSPCAG00000003266	SF3A1	57	99.528	ENSUMAG00000016665	SF3A1	69	99.528	Ursus_maritimus
ENSPCAG00000003266	SF3A1	57	99.057	ENSVVUG00000003075	SF3A1	57	99.057	Vulpes_vulpes
ENSPCAG00000003266	SF3A1	57	86.364	ENSXETG00000016144	sf3a1	57	85.915	Xenopus_tropicalis
ENSPCAG00000003266	SF3A1	57	83.884	ENSXCOG00000015653	sf3a1	58	83.884	Xiphophorus_couchianus
ENSPCAG00000003266	SF3A1	57	83.884	ENSXMAG00000002753	sf3a1	58	83.884	Xiphophorus_maculatus