EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000003378 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 14313 bases
Position: chrGeneScaffold_6775:2488-16800
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003181	MMR_HSR1	PF01926.23	3.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003386	-	2661	-	ENSPCAP00000003181	886 (aa)	-	UPI00018AD7AE

Gene Model

Click here to download ENSPCAG00000003378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003378	-	51	95.575	ENSG00000185739	SRL	99	96.512	Homo_sapiens
ENSPCAG00000003378	-	50	76.871	ENSAPOG00000012432	SRL	98	75.336	Acanthochromis_polyacanthus
ENSPCAG00000003378	-	50	83.636	ENSAPOG00000018093	srl	99	83.636	Acanthochromis_polyacanthus
ENSPCAG00000003378	-	82	95.796	ENSAMEG00000010862	SRL	76	95.796	Ailuropoda_melanoleuca
ENSPCAG00000003378	-	51	82.522	ENSACIG00000015799	srl	99	82.522	Amphilophus_citrinellus
ENSPCAG00000003378	-	50	75.283	ENSACIG00000015419	SRL	98	75.283	Amphilophus_citrinellus
ENSPCAG00000003378	-	50	76.471	ENSAOCG00000017049	SRL	96	76.471	Amphiprion_ocellaris
ENSPCAG00000003378	-	51	82.418	ENSAPEG00000006911	srl	96	82.418	Amphiprion_percula
ENSPCAG00000003378	-	50	73.016	ENSAPEG00000006533	SRL	96	70.705	Amphiprion_percula
ENSPCAG00000003378	-	50	84.127	ENSATEG00000024315	srl	96	82.418	Anabas_testudineus
ENSPCAG00000003378	-	50	73.348	ENSATEG00000009643	SRL	52	73.348	Anabas_testudineus
ENSPCAG00000003378	-	50	90.929	ENSACAG00000016380	SRL	86	89.079	Anolis_carolinensis
ENSPCAG00000003378	-	56	67.387	ENSACLG00000024674	SRL	57	72.588	Astatotilapia_calliptera
ENSPCAG00000003378	-	52	81.659	ENSACLG00000027685	srl	99	81.659	Astatotilapia_calliptera
ENSPCAG00000003378	-	51	82.483	ENSAMXG00000018789	srl	88	82.483	Astyanax_mexicanus
ENSPCAG00000003378	-	80	91.441	ENSBTAG00000001078	SRL	86	91.494	Bos_taurus
ENSPCAG00000003378	-	50	96.380	ENSCJAG00000019750	SRL	96	95.575	Callithrix_jacchus
ENSPCAG00000003378	-	82	92.812	ENSCAFG00000019233	SRL	85	94.541	Canis_familiaris
ENSPCAG00000003378	-	86	90.161	ENSCAFG00020025024	SRL	90	90.161	Canis_lupus_dingo
ENSPCAG00000003378	-	84	92.276	ENSCHIG00000017927	SRL	85	92.324	Capra_hircus
ENSPCAG00000003378	-	51	96.681	ENSTSYG00000007919	SRL	99	96.977	Carlito_syrichta
ENSPCAG00000003378	-	51	95.364	ENSCPOG00000012643	SRL	96	95.364	Cavia_porcellus
ENSPCAG00000003378	-	50	90.045	ENSCCAG00000032646	SRL	99	97.090	Cebus_capucinus
ENSPCAG00000003378	-	86	91.165	ENSCATG00000032227	-	96	95.575	Cercocebus_atys
ENSPCAG00000003378	-	51	95.143	ENSCLAG00000016242	SRL	96	95.143	Chinchilla_lanigera
ENSPCAG00000003378	-	86	91.365	ENSCSAG00000009635	-	76	91.365	Chlorocebus_sabaeus
ENSPCAG00000003378	-	71	96.373	ENSCHOG00000001618	SRL	85	96.373	Choloepus_hoffmanni
ENSPCAG00000003378	-	66	92.802	ENSCPBG00000026371	SRL	96	89.247	Chrysemys_picta_bellii
ENSPCAG00000003378	-	51	95.575	ENSCANG00000035872	SRL	99	96.512	Colobus_angolensis_palliatus
ENSPCAG00000003378	-	89	91.935	ENSCGRG00001016630	Srl	96	95.806	Cricetulus_griseus_chok1gshd
ENSPCAG00000003378	-	89	91.935	ENSCGRG00000005458	Srl	96	95.806	Cricetulus_griseus_crigri
ENSPCAG00000003378	-	51	82.705	ENSCSEG00000016151	srl	96	82.705	Cynoglossus_semilaevis
ENSPCAG00000003378	-	50	72.398	ENSCSEG00000011866	SRL	89	72.398	Cynoglossus_semilaevis
ENSPCAG00000003378	-	50	84.807	ENSCVAG00000003513	srl	95	84.807	Cyprinodon_variegatus
ENSPCAG00000003378	-	50	74.723	ENSCVAG00000022465	SRL	60	74.723	Cyprinodon_variegatus
ENSPCAG00000003378	-	52	82.789	ENSDARG00000104587	srl	96	84.035	Danio_rerio
ENSPCAG00000003378	-	87	90.486	ENSDNOG00000011643	SRL	86	90.891	Dasypus_novemcinctus
ENSPCAG00000003378	-	51	94.505	ENSDORG00000014807	Srl	96	94.505	Dipodomys_ordii
ENSPCAG00000003378	-	87	90.381	ENSEASG00005000942	SRL	87	90.982	Equus_asinus_asinus
ENSPCAG00000003378	-	87	85.230	ENSECAG00000024219	SRL	97	95.186	Equus_caballus
ENSPCAG00000003378	-	51	78.556	ENSELUG00000015616	srl	97	78.556	Esox_lucius
ENSPCAG00000003378	-	90	89.960	ENSFCAG00000022075	SRL	96	94.518	Felis_catus
ENSPCAG00000003378	-	55	86.382	ENSFALG00000004328	SRL	70	86.382	Ficedula_albicollis
ENSPCAG00000003378	-	51	96.247	ENSFDAG00000006199	SRL	96	96.247	Fukomys_damarensis
ENSPCAG00000003378	-	50	83.447	ENSFHEG00000011239	srl	98	81.400	Fundulus_heteroclitus
ENSPCAG00000003378	-	50	75.737	ENSFHEG00000011854	SRL	98	76.644	Fundulus_heteroclitus
ENSPCAG00000003378	-	50	81.236	ENSGMOG00000014954	srl	99	81.236	Gadus_morhua
ENSPCAG00000003378	-	51	90.728	ENSGALG00000038884	SRL	96	90.728	Gallus_gallus
ENSPCAG00000003378	-	50	76.871	ENSGAFG00000016984	SRL	98	75.391	Gambusia_affinis
ENSPCAG00000003378	-	50	83.673	ENSGAFG00000000010	srl	96	83.673	Gambusia_affinis
ENSPCAG00000003378	-	50	81.015	ENSGACG00000011332	srl	99	81.015	Gasterosteus_aculeatus
ENSPCAG00000003378	-	88	91.365	ENSGGOG00000011312	-	96	95.575	Gorilla_gorilla
ENSPCAG00000003378	-	52	70.551	ENSHBUG00000015710	SRL	61	68.560	Haplochromis_burtoni
ENSPCAG00000003378	-	52	81.659	ENSHBUG00000007581	srl	99	81.659	Haplochromis_burtoni
ENSPCAG00000003378	-	51	96.468	ENSHGLG00000015271	SRL	96	96.468	Heterocephalus_glaber_female
ENSPCAG00000003378	-	51	96.468	ENSHGLG00100019378	SRL	96	96.468	Heterocephalus_glaber_male
ENSPCAG00000003378	-	50	72.345	ENSHCOG00000001012	SRL	50	71.018	Hippocampus_comes
ENSPCAG00000003378	-	50	83.673	ENSHCOG00000008687	srl	98	83.673	Hippocampus_comes
ENSPCAG00000003378	-	50	82.766	ENSIPUG00000012513	srl	96	81.099	Ictalurus_punctatus
ENSPCAG00000003378	-	83	92.929	ENSSTOG00000021151	-	96	95.585	Ictidomys_tridecemlineatus
ENSPCAG00000003378	-	51	94.923	ENSJJAG00000016400	Srl	96	94.923	Jaculus_jaculus
ENSPCAG00000003378	-	50	75.909	ENSKMAG00000019537	SRL	99	74.607	Kryptolebias_marmoratus
ENSPCAG00000003378	-	50	82.127	ENSKMAG00000014115	srl	93	84.524	Kryptolebias_marmoratus
ENSPCAG00000003378	-	51	82.040	ENSLBEG00000026643	srl	96	82.040	Labrus_bergylta
ENSPCAG00000003378	-	50	75.737	ENSLBEG00000013811	SRL	95	75.510	Labrus_bergylta
ENSPCAG00000003378	-	51	85.398	ENSLACG00000002825	SRL	99	85.398	Latimeria_chalumnae
ENSPCAG00000003378	-	51	84.802	ENSLOCG00000002644	srl	97	84.802	Lepisosteus_oculatus
ENSPCAG00000003378	-	89	92.323	ENSLAFG00000006329	SRL	91	92.323	Loxodonta_africana
ENSPCAG00000003378	-	86	91.165	ENSMNEG00000019236	-	96	95.354	Macaca_nemestrina
ENSPCAG00000003378	-	51	87.168	ENSMLEG00000032156	SRL	95	87.168	Mandrillus_leucophaeus
ENSPCAG00000003378	-	50	74.172	ENSMAMG00000013756	SRL	53	74.066	Mastacembelus_armatus
ENSPCAG00000003378	-	50	83.900	ENSMAMG00000023322	srl	94	83.900	Mastacembelus_armatus
ENSPCAG00000003378	-	52	81.659	ENSMZEG00005004548	srl	99	81.659	Maylandia_zebra
ENSPCAG00000003378	-	56	67.387	ENSMZEG00005004010	SRL	57	72.588	Maylandia_zebra
ENSPCAG00000003378	-	55	85.366	ENSMGAG00000009342	SRL	98	90.000	Meleagris_gallopavo
ENSPCAG00000003378	-	89	92.308	ENSMICG00000032307	SRL	96	95.575	Microcebus_murinus
ENSPCAG00000003378	-	51	95.143	ENSMOCG00000008208	Srl	96	95.143	Microtus_ochrogaster
ENSPCAG00000003378	-	50	82.766	ENSMMOG00000013970	srl	98	82.766	Mola_mola
ENSPCAG00000003378	-	50	72.467	ENSMMOG00000021572	SRL	99	72.467	Mola_mola
ENSPCAG00000003378	-	65	90.342	ENSMODG00000016380	-	64	90.342	Monodelphis_domestica
ENSPCAG00000003378	-	50	82.993	ENSMALG00000005039	srl	98	82.993	Monopterus_albus
ENSPCAG00000003378	-	75	89.919	MGP_CAROLIEiJ_G0020400	Srl	96	94.260	Mus_caroli
ENSPCAG00000003378	-	89	90.121	ENSMUSG00000022519	Srl	96	94.260	Mus_musculus
ENSPCAG00000003378	-	89	90.264	MGP_PahariEiJ_G0016108	Srl	91	90.264	Mus_pahari
ENSPCAG00000003378	-	84	90.121	MGP_SPRETEiJ_G0021294	Srl	96	94.260	Mus_spretus
ENSPCAG00000003378	-	89	90.562	ENSMPUG00000015025	SRL	86	90.562	Mustela_putorius_furo
ENSPCAG00000003378	-	90	90.818	ENSMLUG00000030733	SRL	89	90.818	Myotis_lucifugus
ENSPCAG00000003378	-	51	94.702	ENSNGAG00000019741	Srl	96	94.702	Nannospalax_galili
ENSPCAG00000003378	-	51	82.965	ENSNBRG00000023775	srl	96	82.965	Neolamprologus_brichardi
ENSPCAG00000003378	-	56	66.994	ENSNBRG00000002422	SRL	63	66.994	Neolamprologus_brichardi
ENSPCAG00000003378	-	51	88.470	ENSNLEG00000029051	SRL	95	88.470	Nomascus_leucogenys
ENSPCAG00000003378	-	84	84.929	ENSOPRG00000000477	-	86	84.929	Ochotona_princeps
ENSPCAG00000003378	-	51	94.260	ENSODEG00000013256	SRL	96	94.260	Octodon_degus
ENSPCAG00000003378	-	51	82.522	ENSONIG00000005192	srl	96	82.522	Oreochromis_niloticus
ENSPCAG00000003378	-	87	92.121	ENSOCUG00000025140	SRL	82	92.121	Oryctolagus_cuniculus
ENSPCAG00000003378	-	50	83.447	ENSORLG00000008291	srl	91	85.492	Oryzias_latipes
ENSPCAG00000003378	-	50	74.603	ENSORLG00000015064	SRL	96	74.603	Oryzias_latipes
ENSPCAG00000003378	-	50	74.830	ENSORLG00020018173	SRL	96	74.830	Oryzias_latipes_hni
ENSPCAG00000003378	-	50	83.220	ENSORLG00020019784	srl	79	85.233	Oryzias_latipes_hni
ENSPCAG00000003378	-	50	82.766	ENSORLG00015009342	srl	91	82.766	Oryzias_latipes_hsok
ENSPCAG00000003378	-	50	75.057	ENSORLG00015019063	SRL	96	75.057	Oryzias_latipes_hsok
ENSPCAG00000003378	-	50	72.467	ENSOMEG00000005682	SRL	53	72.368	Oryzias_melastigma
ENSPCAG00000003378	-	50	82.993	ENSOMEG00000010006	srl	97	83.144	Oryzias_melastigma
ENSPCAG00000003378	-	89	91.165	ENSOGAG00000029266	SRL	88	91.165	Otolemur_garnettii
ENSPCAG00000003378	-	63	94.702	ENSOARG00000003074	SRL	79	94.702	Ovis_aries
ENSPCAG00000003378	-	88	91.165	ENSPPAG00000024919	-	99	96.512	Pan_paniscus
ENSPCAG00000003378	-	50	95.701	ENSPPRG00000010274	SRL	99	95.814	Panthera_pardus
ENSPCAG00000003378	-	50	95.701	ENSPTIG00000015162	SRL	99	95.814	Panthera_tigris_altaica
ENSPCAG00000003378	-	88	91.165	ENSPTRG00000007712	SRL	99	96.512	Pan_troglodytes
ENSPCAG00000003378	-	51	95.575	ENSPANG00000013804	SRL	97	95.575	Papio_anubis
ENSPCAG00000003378	-	50	76.417	ENSPKIG00000024974	SRL	88	76.417	Paramormyrops_kingsleyae
ENSPCAG00000003378	-	51	83.297	ENSPKIG00000006405	srl	96	83.297	Paramormyrops_kingsleyae
ENSPCAG00000003378	-	52	89.610	ENSPSIG00000008586	SRL	61	89.610	Pelodiscus_sinensis
ENSPCAG00000003378	-	51	83.814	ENSPMGG00000021081	srl	97	83.814	Periophthalmus_magnuspinnatus
ENSPCAG00000003378	-	50	73.469	ENSPMGG00000023505	-	99	73.243	Periophthalmus_magnuspinnatus
ENSPCAG00000003378	-	51	95.143	ENSPEMG00000015842	Srl	96	95.143	Peromyscus_maniculatus_bairdii
ENSPCAG00000003378	-	51	94.311	ENSPCIG00000012128	SRL	99	94.311	Phascolarctos_cinereus
ENSPCAG00000003378	-	50	81.457	ENSPFOG00000011408	srl	93	81.457	Poecilia_formosa
ENSPCAG00000003378	-	50	76.190	ENSPLAG00000002932	SRL	98	75.057	Poecilia_latipinna
ENSPCAG00000003378	-	50	83.447	ENSPLAG00000008017	srl	96	83.447	Poecilia_latipinna
ENSPCAG00000003378	-	50	73.904	ENSPMEG00000005890	SRL	59	74.229	Poecilia_mexicana
ENSPCAG00000003378	-	50	83.447	ENSPMEG00000006745	srl	96	83.447	Poecilia_mexicana
ENSPCAG00000003378	-	50	77.324	ENSPREG00000000315	SRL	98	76.190	Poecilia_reticulata
ENSPCAG00000003378	-	50	83.673	ENSPREG00000007751	srl	98	83.673	Poecilia_reticulata
ENSPCAG00000003378	-	51	96.018	ENSPCOG00000023135	SRL	99	96.744	Propithecus_coquereli
ENSPCAG00000003378	-	85	91.313	ENSPVAG00000006586	SRL	85	91.313	Pteropus_vampyrus
ENSPCAG00000003378	-	51	82.637	ENSPNYG00000001200	srl	99	81.441	Pundamilia_nyererei
ENSPCAG00000003378	-	56	67.387	ENSPNYG00000003423	SRL	57	72.588	Pundamilia_nyererei
ENSPCAG00000003378	-	51	82.040	ENSPNAG00000023106	srl	96	82.040	Pygocentrus_nattereri
ENSPCAG00000003378	-	50	74.603	ENSPNAG00000007361	-	91	74.603	Pygocentrus_nattereri
ENSPCAG00000003378	-	89	90.726	ENSRNOG00000005269	Srl	79	90.726	Rattus_norvegicus
ENSPCAG00000003378	-	86	91.566	ENSRBIG00000042358	SRL	83	91.566	Rhinopithecus_bieti
ENSPCAG00000003378	-	85	91.767	ENSSBOG00000029273	SRL	96	95.575	Saimiri_boliviensis_boliviensis
ENSPCAG00000003378	-	85	94.760	ENSSHAG00000011715	-	62	93.939	Sarcophilus_harrisii
ENSPCAG00000003378	-	50	77.324	ENSSFOG00015021327	SRL	51	76.044	Scleropages_formosus
ENSPCAG00000003378	-	50	84.127	ENSSFOG00015009773	srl	97	83.002	Scleropages_formosus
ENSPCAG00000003378	-	51	82.183	ENSSMAG00000016274	srl	98	82.183	Scophthalmus_maximus
ENSPCAG00000003378	-	50	73.465	ENSSMAG00000002232	SRL	50	72.467	Scophthalmus_maximus
ENSPCAG00000003378	-	50	84.354	ENSSDUG00000010808	srl	97	84.354	Seriola_dumerili
ENSPCAG00000003378	-	50	75.223	ENSSDUG00000009161	SRL	98	75.223	Seriola_dumerili
ENSPCAG00000003378	-	50	84.354	ENSSLDG00000022024	srl	95	84.354	Seriola_lalandi_dorsalis
ENSPCAG00000003378	-	50	74.561	ENSSLDG00000014601	SRL	99	74.670	Seriola_lalandi_dorsalis
ENSPCAG00000003378	-	51	89.625	ENSSPUG00000016859	SRL	99	89.625	Sphenodon_punctatus
ENSPCAG00000003378	-	50	76.364	ENSSPAG00000014254	SRL	98	75.227	Stegastes_partitus
ENSPCAG00000003378	-	50	84.127	ENSSPAG00000019105	srl	96	82.781	Stegastes_partitus
ENSPCAG00000003378	-	89	88.778	ENSSSCG00000007949	SRL	100	94.878	Sus_scrofa
ENSPCAG00000003378	-	51	90.789	ENSTGUG00000003951	-	100	90.789	Taeniopygia_guttata
ENSPCAG00000003378	-	50	82.766	ENSTRUG00000006005	srl	94	82.766	Takifugu_rubripes
ENSPCAG00000003378	-	50	82.540	ENSTNIG00000009739	srl	96	81.375	Tetraodon_nigroviridis
ENSPCAG00000003378	-	68	94.773	ENSTTRG00000002709	-	67	94.773	Tursiops_truncatus
ENSPCAG00000003378	-	87	88.956	ENSUAMG00000005701	SRL	86	88.956	Ursus_americanus
ENSPCAG00000003378	-	87	89.157	ENSUMAG00000002574	SRL	86	89.157	Ursus_maritimus
ENSPCAG00000003378	-	85	90.161	ENSVVUG00000016331	-	77	90.161	Vulpes_vulpes
ENSPCAG00000003378	-	51	88.914	ENSXETG00000017313	srl	99	88.914	Xenopus_tropicalis
ENSPCAG00000003378	-	50	76.417	ENSXCOG00000014584	SRL	99	74.123	Xiphophorus_couchianus
ENSPCAG00000003378	-	50	74.229	ENSXMAG00000027598	SRL	62	74.890	Xiphophorus_maculatus
ENSPCAG00000003378	-	50	84.127	ENSXMAG00000004625	srl	89	84.127	Xiphophorus_maculatus