EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000003393 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 4211 bases
Position: chrGeneScaffold_6561:50496-54706
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003151	zf-CCHC	PF00098.23	9.9e-08	1	1
ENSPCAP00000003151	RRM_5	PF13893.6	5.5e-07	1	2
ENSPCAP00000003151	RRM_5	PF13893.6	5.5e-07	2	2
ENSPCAP00000003151	RRM_1	PF00076.22	7.1e-31	1	2
ENSPCAP00000003151	RRM_1	PF00076.22	7.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003355	-	1092	-	ENSPCAP00000003151	363 (aa)	-	UPI00018B0925

Gene Model

Click here to download ENSPCAG00000003393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000003393	-	100	83.651	ENSPCAG00000003414	-	100	83.924

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003393	-	100	96.438	ENSG00000173933	RBM4	100	96.438	Homo_sapiens
ENSPCAG00000003393	-	100	88.767	ENSG00000173914	RBM4B	97	98.561	Homo_sapiens
ENSPCAG00000003393	-	99	71.585	ENSG00000248643	RBM14-RBM4	100	72.131	Homo_sapiens
ENSPCAG00000003393	-	100	89.315	ENSAMEG00000010906	RBM4B	100	88.493	Ailuropoda_melanoleuca
ENSPCAG00000003393	-	100	97.260	ENSAMEG00000010914	RBM4	100	97.260	Ailuropoda_melanoleuca
ENSPCAG00000003393	-	100	88.493	ENSANAG00000023478	RBM4B	97	98.561	Aotus_nancymaae
ENSPCAG00000003393	-	100	89.589	ENSBTAG00000000423	RBM4B	100	88.767	Bos_taurus
ENSPCAG00000003393	-	100	94.795	ENSBTAG00000031688	RBM4	100	95.342	Bos_taurus
ENSPCAG00000003393	-	100	88.493	ENSCJAG00000013666	RBM4B	97	98.561	Callithrix_jacchus
ENSPCAG00000003393	-	100	97.260	ENSCAFG00000012388	RBM4	100	97.260	Canis_familiaris
ENSPCAG00000003393	-	100	89.041	ENSCAFG00000012378	RBM4B	100	88.219	Canis_familiaris
ENSPCAG00000003393	-	100	89.041	ENSCAFG00020015519	RBM4B	100	88.219	Canis_lupus_dingo
ENSPCAG00000003393	-	100	97.260	ENSCAFG00020015515	RBM4	100	97.260	Canis_lupus_dingo
ENSPCAG00000003393	-	100	89.589	ENSCHIG00000008907	RBM4B	100	88.767	Capra_hircus
ENSPCAG00000003393	-	100	94.795	ENSCHIG00000020613	RBM4	100	95.342	Capra_hircus
ENSPCAG00000003393	-	66	80.498	ENSTSYG00000009580	RBM4B	96	79.253	Carlito_syrichta
ENSPCAG00000003393	-	100	96.986	ENSCAPG00000016600	RBM4	100	96.986	Cavia_aperea
ENSPCAG00000003393	-	100	88.767	ENSCAPG00000009570	RBM4B	100	86.301	Cavia_aperea
ENSPCAG00000003393	-	100	96.986	ENSCPOG00000013194	RBM4	100	96.986	Cavia_porcellus
ENSPCAG00000003393	-	100	88.767	ENSCPOG00000013689	RBM4B	100	86.301	Cavia_porcellus
ENSPCAG00000003393	-	55	72.139	ENSCCAG00000023319	-	100	72.139	Cebus_capucinus
ENSPCAG00000003393	-	100	88.767	ENSCCAG00000016501	RBM4B	97	98.561	Cebus_capucinus
ENSPCAG00000003393	-	100	88.767	ENSCATG00000035353	RBM4B	97	98.561	Cercocebus_atys
ENSPCAG00000003393	-	100	96.712	ENSCLAG00000014756	RBM4	100	96.712	Chinchilla_lanigera
ENSPCAG00000003393	-	100	88.767	ENSCLAG00000015287	RBM4B	100	87.945	Chinchilla_lanigera
ENSPCAG00000003393	-	100	88.767	ENSCSAG00000008361	RBM4B	100	87.945	Chlorocebus_sabaeus
ENSPCAG00000003393	-	62	96.476	ENSCHOG00000009753	RBM14-RBM4	100	96.476	Choloepus_hoffmanni
ENSPCAG00000003393	-	100	89.863	ENSCHOG00000002892	RBM4B	100	89.041	Choloepus_hoffmanni
ENSPCAG00000003393	-	100	74.869	ENSCPBG00000023800	-	100	74.005	Chrysemys_picta_bellii
ENSPCAG00000003393	-	100	88.767	ENSCANG00000021868	RBM4B	97	98.561	Colobus_angolensis_palliatus
ENSPCAG00000003393	-	100	93.425	ENSCGRG00001016609	-	97	99.275	Cricetulus_griseus_chok1gshd
ENSPCAG00000003393	-	100	84.932	ENSCGRG00001024693	Rbm4b	100	85.479	Cricetulus_griseus_chok1gshd
ENSPCAG00000003393	-	100	84.932	ENSCGRG00000012112	Rbm4b	100	85.479	Cricetulus_griseus_crigri
ENSPCAG00000003393	-	100	93.425	ENSCGRG00000010183	-	97	99.275	Cricetulus_griseus_crigri
ENSPCAG00000003393	-	100	96.712	ENSDNOG00000032390	RBM4	100	96.712	Dasypus_novemcinctus
ENSPCAG00000003393	-	100	89.315	ENSDNOG00000019500	-	100	88.493	Dasypus_novemcinctus
ENSPCAG00000003393	-	100	88.493	ENSDNOG00000045639	-	100	87.671	Dasypus_novemcinctus
ENSPCAG00000003393	-	100	85.753	ENSDORG00000029108	Rbm4b	100	86.301	Dipodomys_ordii
ENSPCAG00000003393	-	100	93.699	ENSDORG00000004538	-	97	97.101	Dipodomys_ordii
ENSPCAG00000003393	-	62	64.159	ENSETEG00000018142	-	100	64.159	Echinops_telfairi
ENSPCAG00000003393	-	100	89.041	ENSEASG00005005068	RBM4B	100	88.219	Equus_asinus_asinus
ENSPCAG00000003393	-	100	95.616	ENSEASG00005005064	RBM4	100	95.616	Equus_asinus_asinus
ENSPCAG00000003393	-	100	95.616	ENSECAG00000022940	RBM4	100	95.616	Equus_caballus
ENSPCAG00000003393	-	100	88.767	ENSECAG00000022987	RBM4B	100	87.945	Equus_caballus
ENSPCAG00000003393	-	100	87.397	ENSEEUG00000000058	RBM4B	100	86.849	Erinaceus_europaeus
ENSPCAG00000003393	-	100	88.219	ENSFCAG00000007394	RBM4B	97	98.561	Felis_catus
ENSPCAG00000003393	-	100	97.260	ENSFCAG00000029651	RBM4	100	97.260	Felis_catus
ENSPCAG00000003393	-	100	69.003	ENSFALG00000002073	-	100	67.838	Ficedula_albicollis
ENSPCAG00000003393	-	100	88.767	ENSFDAG00000015530	RBM4B	100	87.945	Fukomys_damarensis
ENSPCAG00000003393	-	100	96.164	ENSFDAG00000005447	RBM4	100	96.164	Fukomys_damarensis
ENSPCAG00000003393	-	100	77.128	ENSGALG00000037946	-	100	76.011	Gallus_gallus
ENSPCAG00000003393	-	100	75.718	ENSGAGG00000008553	-	100	74.271	Gopherus_agassizii
ENSPCAG00000003393	-	100	88.767	ENSGGOG00000011698	RBM4B	97	98.561	Gorilla_gorilla
ENSPCAG00000003393	-	79	56.250	ENSHGLG00000000117	-	95	66.027	Heterocephalus_glaber_female
ENSPCAG00000003393	-	100	74.247	ENSHGLG00000002853	-	100	73.973	Heterocephalus_glaber_female
ENSPCAG00000003393	-	100	89.041	ENSHGLG00000016412	-	100	88.219	Heterocephalus_glaber_female
ENSPCAG00000003393	-	100	96.164	ENSHGLG00000009991	RBM4	100	96.164	Heterocephalus_glaber_female
ENSPCAG00000003393	-	100	83.288	ENSHGLG00100003854	RBM4	97	98.551	Heterocephalus_glaber_male
ENSPCAG00000003393	-	100	88.251	ENSHGLG00100003978	-	100	87.432	Heterocephalus_glaber_male
ENSPCAG00000003393	-	96	75.358	ENSHGLG00100020033	-	100	75.072	Heterocephalus_glaber_male
ENSPCAG00000003393	-	100	88.767	ENSSTOG00000011226	RBM4B	100	88.219	Ictidomys_tridecemlineatus
ENSPCAG00000003393	-	100	96.986	ENSSTOG00000022811	RBM4	100	96.986	Ictidomys_tridecemlineatus
ENSPCAG00000003393	-	100	84.658	ENSJJAG00000020870	Rbm4b	100	84.110	Jaculus_jaculus
ENSPCAG00000003393	-	100	97.808	ENSLAFG00000028147	-	100	97.808	Loxodonta_africana
ENSPCAG00000003393	-	100	84.658	ENSLAFG00000002285	RBM4B	100	85.205	Loxodonta_africana
ENSPCAG00000003393	-	100	88.767	ENSMFAG00000033927	RBM4B	97	99.275	Macaca_fascicularis
ENSPCAG00000003393	-	100	88.767	ENSMNEG00000043371	RBM4B	97	98.561	Macaca_nemestrina
ENSPCAG00000003393	-	100	88.767	ENSMLEG00000028563	RBM4B	97	99.275	Mandrillus_leucophaeus
ENSPCAG00000003393	-	100	84.658	ENSMAUG00000017027	Rbm4b	100	84.932	Mesocricetus_auratus
ENSPCAG00000003393	-	100	89.041	ENSMICG00000003820	RBM4B	97	98.561	Microcebus_murinus
ENSPCAG00000003393	-	100	84.932	ENSMOCG00000001835	Rbm4b	100	85.479	Microtus_ochrogaster
ENSPCAG00000003393	-	100	90.463	ENSMODG00000008056	-	100	90.191	Monodelphis_domestica
ENSPCAG00000003393	-	100	90.984	MGP_CAROLIEiJ_G0022516	-	97	99.275	Mus_caroli
ENSPCAG00000003393	-	99	66.213	MGP_CAROLIEiJ_G0022514	-	100	67.302	Mus_caroli
ENSPCAG00000003393	-	100	85.753	MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.301	Mus_caroli
ENSPCAG00000003393	-	100	85.479	ENSMUSG00000033760	Rbm4b	91	98.561	Mus_musculus
ENSPCAG00000003393	-	100	90.984	ENSMUSG00000096370	Gm21992	100	92.077	Mus_musculus
ENSPCAG00000003393	-	100	90.984	ENSMUSG00000094936	Rbm4	100	99.419	Mus_musculus
ENSPCAG00000003393	-	100	91.257	MGP_PahariEiJ_G0014011	-	100	92.077	Mus_pahari
ENSPCAG00000003393	-	100	91.257	MGP_PahariEiJ_G0014013	-	97	99.275	Mus_pahari
ENSPCAG00000003393	-	100	85.205	MGP_PahariEiJ_G0014012	Rbm4b	100	85.753	Mus_pahari
ENSPCAG00000003393	-	100	74.085	MGP_SPRETEiJ_G0023430	-	100	75.305	Mus_spretus
ENSPCAG00000003393	-	100	74.085	MGP_SPRETEiJ_G0023428	-	94	75.305	Mus_spretus
ENSPCAG00000003393	-	100	74.653	MGP_SPRETEiJ_G0023429	-	100	75.347	Mus_spretus
ENSPCAG00000003393	-	100	96.986	ENSMPUG00000003443	RBM4	100	96.986	Mustela_putorius_furo
ENSPCAG00000003393	-	100	89.589	ENSMPUG00000003450	RBM4B	100	88.767	Mustela_putorius_furo
ENSPCAG00000003393	-	100	86.849	ENSMLUG00000001290	RBM4B	100	86.301	Myotis_lucifugus
ENSPCAG00000003393	-	99	94.766	ENSMLUG00000004076	RBM4	95	95.317	Myotis_lucifugus
ENSPCAG00000003393	-	100	86.301	ENSNGAG00000016292	Rbm4b	100	86.301	Nannospalax_galili
ENSPCAG00000003393	-	100	87.945	ENSNLEG00000006213	RBM4B	97	98.561	Nomascus_leucogenys
ENSPCAG00000003393	-	100	96.438	ENSNLEG00000035021	RBM4	100	96.438	Nomascus_leucogenys
ENSPCAG00000003393	-	100	89.589	ENSMEUG00000001445	-	100	89.041	Notamacropus_eugenii
ENSPCAG00000003393	-	62	85.463	ENSMEUG00000005739	-	100	85.463	Notamacropus_eugenii
ENSPCAG00000003393	-	100	95.890	ENSOPRG00000009149	RBM4	100	95.890	Ochotona_princeps
ENSPCAG00000003393	-	100	89.041	ENSOPRG00000009158	RBM4B	100	88.493	Ochotona_princeps
ENSPCAG00000003393	-	100	88.493	ENSODEG00000017696	-	100	87.671	Octodon_degus
ENSPCAG00000003393	-	100	77.260	ENSODEG00000001866	-	100	77.808	Octodon_degus
ENSPCAG00000003393	-	100	85.440	ENSOANG00000011036	-	100	84.890	Ornithorhynchus_anatinus
ENSPCAG00000003393	-	100	79.396	ENSOANG00000003143	-	84	79.121	Ornithorhynchus_anatinus
ENSPCAG00000003393	-	100	96.986	ENSOCUG00000004731	RBM4	100	96.986	Oryctolagus_cuniculus
ENSPCAG00000003393	-	100	89.041	ENSOCUG00000006695	LARK	100	88.219	Oryctolagus_cuniculus
ENSPCAG00000003393	-	100	89.041	ENSOGAG00000015648	RBM4B	100	88.219	Otolemur_garnettii
ENSPCAG00000003393	-	100	96.438	ENSOGAG00000015647	RBM4	100	96.438	Otolemur_garnettii
ENSPCAG00000003393	-	100	92.308	ENSOARG00000007700	RBM4	100	92.857	Ovis_aries
ENSPCAG00000003393	-	100	89.315	ENSOARG00000007759	RBM4B	100	89.041	Ovis_aries
ENSPCAG00000003393	-	100	88.767	ENSPPAG00000015125	RBM4B	97	98.561	Pan_paniscus
ENSPCAG00000003393	-	100	88.219	ENSPPRG00000003388	RBM4B	97	98.561	Panthera_pardus
ENSPCAG00000003393	-	100	97.260	ENSPPRG00000003533	RBM4	100	97.260	Panthera_pardus
ENSPCAG00000003393	-	100	84.110	ENSPTIG00000016180	RBM4	97	98.551	Panthera_tigris_altaica
ENSPCAG00000003393	-	100	88.219	ENSPTIG00000015426	RBM4B	97	98.561	Panthera_tigris_altaica
ENSPCAG00000003393	-	100	88.767	ENSPTRG00000003935	RBM4B	97	98.561	Pan_troglodytes
ENSPCAG00000003393	-	100	88.767	ENSPANG00000020672	RBM4B	97	98.561	Papio_anubis
ENSPCAG00000003393	-	76	78.125	ENSPSIG00000003477	-	95	77.700	Pelodiscus_sinensis
ENSPCAG00000003393	-	100	75.000	ENSPSIG00000003430	-	100	74.124	Pelodiscus_sinensis
ENSPCAG00000003393	-	100	85.753	ENSPEMG00000009144	Rbm4b	100	86.027	Peromyscus_maniculatus_bairdii
ENSPCAG00000003393	-	100	95.342	ENSPPYG00000003012	RBM4	100	95.342	Pongo_abelii
ENSPCAG00000003393	-	100	88.767	ENSPPYG00000003010	RBM4B	100	87.945	Pongo_abelii
ENSPCAG00000003393	-	100	89.041	ENSPCOG00000027885	RBM4B	97	98.561	Propithecus_coquereli
ENSPCAG00000003393	-	100	96.986	ENSPVAG00000010486	RBM4	100	96.986	Pteropus_vampyrus
ENSPCAG00000003393	-	100	89.315	ENSPVAG00000010487	RBM4B	100	88.493	Pteropus_vampyrus
ENSPCAG00000003393	-	100	86.027	ENSRNOG00000061795	Rbm4b	100	86.575	Rattus_norvegicus
ENSPCAG00000003393	-	100	93.443	ENSRNOG00000050741	Rbm4	97	99.275	Rattus_norvegicus
ENSPCAG00000003393	-	100	88.767	ENSRBIG00000019394	RBM4B	97	98.561	Rhinopithecus_bieti
ENSPCAG00000003393	-	100	88.767	ENSRROG00000032850	RBM4B	97	98.561	Rhinopithecus_roxellana
ENSPCAG00000003393	-	100	88.219	ENSSBOG00000034474	RBM4B	97	97.842	Saimiri_boliviensis_boliviensis
ENSPCAG00000003393	-	100	86.849	ENSSHAG00000008386	-	100	86.575	Sarcophilus_harrisii
ENSPCAG00000003393	-	100	88.767	ENSSARG00000010710	RBM4B	100	87.945	Sorex_araneus
ENSPCAG00000003393	-	100	97.260	ENSSSCG00000032437	RBM4	100	97.260	Sus_scrofa
ENSPCAG00000003393	-	77	78.767	ENSTGUG00000016779	-	94	77.700	Taeniopygia_guttata
ENSPCAG00000003393	-	60	97.727	ENSTBEG00000003727	-	70	97.727	Tupaia_belangeri
ENSPCAG00000003393	-	100	86.849	ENSTBEG00000003748	RBM4B	100	86.301	Tupaia_belangeri
ENSPCAG00000003393	-	100	89.041	ENSTTRG00000011166	RBM4B	100	88.219	Tursiops_truncatus
ENSPCAG00000003393	-	100	95.890	ENSTTRG00000011164	RBM4	100	95.890	Tursiops_truncatus
ENSPCAG00000003393	-	100	97.260	ENSUAMG00000014882	RBM4	100	97.260	Ursus_americanus
ENSPCAG00000003393	-	100	89.589	ENSUAMG00000004745	RBM4B	100	88.767	Ursus_americanus
ENSPCAG00000003393	-	64	98.723	ENSUMAG00000011738	-	97	98.551	Ursus_maritimus
ENSPCAG00000003393	-	100	89.041	ENSVPAG00000001950	RBM4B	100	88.219	Vicugna_pacos
ENSPCAG00000003393	-	100	95.604	ENSVPAG00000001949	RBM4	100	95.604	Vicugna_pacos
ENSPCAG00000003393	-	100	89.041	ENSVVUG00000010619	RBM4B	100	88.219	Vulpes_vulpes
ENSPCAG00000003393	-	100	96.712	ENSVVUG00000010622	RBM4	100	96.712	Vulpes_vulpes