EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000003414 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 6551 bases
Position: chrGeneScaffold_6561:72105-78655
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003167	zf-CCHC	PF00098.23	9.1e-08	1	1
ENSPCAP00000003167	RRM_5	PF13893.6	1.3e-08	1	2
ENSPCAP00000003167	RRM_5	PF13893.6	1.3e-08	2	2
ENSPCAP00000003167	RRM_1	PF00076.22	4.1e-35	1	2
ENSPCAP00000003167	RRM_1	PF00076.22	4.1e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003371	-	1086	-	ENSPCAP00000003167	361 (aa)	-	UPI00018B0926

Gene Model

Click here to download ENSPCAG00000003414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000003414	-	100	83.924	ENSPCAG00000003393	-	100	83.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003414	-	100	73.699	ENSACAG00000007777	-	100	72.877	Anolis_carolinensis
ENSPCAG00000003414	-	100	67.313	ENSCCAG00000029710	-	96	81.022	Cebus_capucinus
ENSPCAG00000003414	-	59	81.221	ENSCANG00000043380	-	99	81.221	Colobus_angolensis_palliatus
ENSPCAG00000003414	-	100	69.806	ENSGGOG00000025398	-	98	77.857	Gorilla_gorilla
ENSPCAG00000003414	-	53	94.203	ENSHGLG00000007708	-	95	94.203	Heterocephalus_glaber_female
ENSPCAG00000003414	-	100	64.266	ENSHGLG00000007536	-	100	61.219	Heterocephalus_glaber_female
ENSPCAG00000003414	-	100	65.374	ENSHGLG00100011767	-	77	88.321	Heterocephalus_glaber_male
ENSPCAG00000003414	-	53	94.203	ENSHGLG00100011999	-	95	94.203	Heterocephalus_glaber_male
ENSPCAG00000003414	-	64	50.638	ENSLACG00000009547	-	89	51.271	Latimeria_chalumnae
ENSPCAG00000003414	-	60	82.949	ENSMFAG00000041731	-	93	82.949	Macaca_fascicularis
ENSPCAG00000003414	-	96	70.317	ENSMMUG00000003366	-	100	67.049	Macaca_mulatta
ENSPCAG00000003414	-	60	82.949	ENSMNEG00000036946	-	93	82.949	Macaca_nemestrina
ENSPCAG00000003414	-	60	81.567	ENSMLEG00000038589	-	93	81.567	Mandrillus_leucophaeus
ENSPCAG00000003414	-	100	66.205	ENSNLEG00000027654	-	100	64.266	Nomascus_leucogenys
ENSPCAG00000003414	-	99	68.314	ENSPPAG00000040796	-	100	66.279	Pan_paniscus
ENSPCAG00000003414	-	99	67.733	ENSPTRG00000046155	-	100	65.698	Pan_troglodytes
ENSPCAG00000003414	-	60	81.567	ENSPANG00000018676	-	93	81.567	Papio_anubis
ENSPCAG00000003414	-	95	64.035	ENSRBIG00000035855	-	100	78.824	Rhinopithecus_bieti
ENSPCAG00000003414	-	99	65.449	ENSRROG00000038956	-	100	78.824	Rhinopithecus_roxellana
ENSPCAG00000003414	-	98	83.746	ENSSHAG00000008133	-	99	83.746	Sarcophilus_harrisii
ENSPCAG00000003414	-	100	92.798	ENSSSCG00000038304	-	100	92.521	Sus_scrofa