EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000003484 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 7844 bases
Position: chrscaffold_62946:4515-12358
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003265	DEAD	PF00270.29	9.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003478	DDX39B-201	852	-	ENSPCAP00000003265	283 (aa)	-	UPI00018AD4AF

Gene Model

Click here to download ENSPCAG00000003484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000003484	DDX39B	86	36.735	ENSPCAG00000010163	EIF4A2	59	36.735
ENSPCAG00000003484	DDX39B	94	35.821	ENSPCAG00000012966	EIF4A1	65	35.821
ENSPCAG00000003484	DDX39B	99	30.634	ENSPCAG00000004767	DDX6	57	30.634
ENSPCAG00000003484	DDX39B	100	75.000	ENSPCAG00000005768	DDX39A	66	75.000
ENSPCAG00000003484	DDX39B	85	34.274	ENSPCAG00000014309	DDX19A	54	34.274

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003484	DDX39B	100	99.648	ENSG00000198563	DDX39B	95	99.438	Homo_sapiens
ENSPCAG00000003484	DDX39B	100	99.648	ENSAMEG00000009508	DDX39B	66	99.648	Ailuropoda_melanoleuca
ENSPCAG00000003484	DDX39B	98	96.057	ENSACIG00000004534	ddx39b	64	96.057	Amphilophus_citrinellus
ENSPCAG00000003484	DDX39B	100	95.070	ENSATEG00000012366	ddx39b	66	95.070	Anabas_testudineus
ENSPCAG00000003484	DDX39B	100	98.947	ENSACAG00000012240	DDX39B	66	98.947	Anolis_carolinensis
ENSPCAG00000003484	DDX39B	100	99.648	ENSANAG00000030372	DDX39B	69	99.648	Aotus_nancymaae
ENSPCAG00000003484	DDX39B	99	93.286	ENSACLG00000018759	ddx39b	65	93.286	Astatotilapia_calliptera
ENSPCAG00000003484	DDX39B	100	95.775	ENSAMXG00000017837	ddx39b	65	95.775	Astyanax_mexicanus
ENSPCAG00000003484	DDX39B	100	99.648	ENSBTAG00000014490	DDX39B	66	99.648	Bos_taurus
ENSPCAG00000003484	DDX39B	100	99.648	ENSCJAG00000003152	DDX39B	66	99.648	Callithrix_jacchus
ENSPCAG00000003484	DDX39B	100	99.648	ENSCAFG00000000509	DDX39B	92	99.648	Canis_familiaris
ENSPCAG00000003484	DDX39B	100	99.648	ENSCAFG00020020530	DDX39B	66	99.648	Canis_lupus_dingo
ENSPCAG00000003484	DDX39B	100	99.648	ENSCHIG00000004579	DDX39B	66	99.648	Capra_hircus
ENSPCAG00000003484	DDX39B	100	83.451	ENSTSYG00000029741	-	69	83.451	Carlito_syrichta
ENSPCAG00000003484	DDX39B	100	99.648	ENSTSYG00000010226	-	69	99.648	Carlito_syrichta
ENSPCAG00000003484	DDX39B	100	99.296	ENSCAPG00000010066	DDX39B	66	99.296	Cavia_aperea
ENSPCAG00000003484	DDX39B	100	99.296	ENSCPOG00000002335	DDX39B	66	99.296	Cavia_porcellus
ENSPCAG00000003484	DDX39B	100	99.648	ENSCCAG00000027897	DDX39B	68	99.648	Cebus_capucinus
ENSPCAG00000003484	DDX39B	99	92.171	ENSCATG00000043709	DDX39B	67	92.171	Cercocebus_atys
ENSPCAG00000003484	DDX39B	100	99.296	ENSCLAG00000014555	DDX39B	66	99.296	Chinchilla_lanigera
ENSPCAG00000003484	DDX39B	99	99.288	ENSCSAG00000008517	DDX39B	66	99.288	Chlorocebus_sabaeus
ENSPCAG00000003484	DDX39B	96	99.634	ENSCPBG00000014671	-	100	99.634	Chrysemys_picta_bellii
ENSPCAG00000003484	DDX39B	100	99.648	ENSCANG00000041217	DDX39B	69	99.648	Colobus_angolensis_palliatus
ENSPCAG00000003484	DDX39B	99	81.625	ENSCGRG00001021916	-	68	81.625	Cricetulus_griseus_chok1gshd
ENSPCAG00000003484	DDX39B	100	95.775	ENSDARG00000036069	ddx39b	65	95.775	Danio_rerio
ENSPCAG00000003484	DDX39B	100	99.648	ENSDNOG00000010215	DDX39B	66	99.648	Dasypus_novemcinctus
ENSPCAG00000003484	DDX39B	100	99.648	ENSDORG00000004985	Ddx39b	71	99.648	Dipodomys_ordii
ENSPCAG00000003484	DDX39B	81	79.130	ENSETEG00000009649	DDX39B	54	79.130	Echinops_telfairi
ENSPCAG00000003484	DDX39B	100	99.648	ENSEASG00005017156	DDX39B	66	99.648	Equus_asinus_asinus
ENSPCAG00000003484	DDX39B	100	99.648	ENSECAG00000007750	DDX39B	66	99.648	Equus_caballus
ENSPCAG00000003484	DDX39B	100	95.423	ENSELUG00000017904	ddx39b	66	95.423	Esox_lucius
ENSPCAG00000003484	DDX39B	100	99.648	ENSFCAG00000004497	DDX39B	66	99.648	Felis_catus
ENSPCAG00000003484	DDX39B	100	99.296	ENSFDAG00000011074	DDX39B	66	99.296	Fukomys_damarensis
ENSPCAG00000003484	DDX39B	100	99.648	ENSGAGG00000001300	-	72	99.648	Gopherus_agassizii
ENSPCAG00000003484	DDX39B	100	99.648	ENSGGOG00000005989	DDX39B	69	99.648	Gorilla_gorilla
ENSPCAG00000003484	DDX39B	100	99.296	ENSHGLG00000019248	DDX39B	66	99.296	Heterocephalus_glaber_female
ENSPCAG00000003484	DDX39B	100	99.296	ENSHGLG00100011850	DDX39B	66	99.296	Heterocephalus_glaber_male
ENSPCAG00000003484	DDX39B	100	95.070	ENSIPUG00000015733	DDX39B	61	95.070	Ictalurus_punctatus
ENSPCAG00000003484	DDX39B	100	98.944	ENSSTOG00000012838	DDX39B	66	98.944	Ictidomys_tridecemlineatus
ENSPCAG00000003484	DDX39B	100	99.296	ENSJJAG00000005660	-	66	99.296	Jaculus_jaculus
ENSPCAG00000003484	DDX39B	98	79.570	ENSLBEG00000012254	ddx39b	65	79.570	Labrus_bergylta
ENSPCAG00000003484	DDX39B	100	99.296	ENSLACG00000002110	DDX39B	66	99.296	Latimeria_chalumnae
ENSPCAG00000003484	DDX39B	100	99.296	ENSLAFG00000014202	DDX39B	66	99.296	Loxodonta_africana
ENSPCAG00000003484	DDX39B	100	99.648	ENSMFAG00000034233	DDX39B	69	99.648	Macaca_fascicularis
ENSPCAG00000003484	DDX39B	100	99.648	ENSMMUG00000008839	DDX39B	69	99.648	Macaca_mulatta
ENSPCAG00000003484	DDX39B	100	99.648	ENSMNEG00000041059	DDX39B	69	99.648	Macaca_nemestrina
ENSPCAG00000003484	DDX39B	100	99.648	ENSMLEG00000043791	DDX39B	69	99.648	Mandrillus_leucophaeus
ENSPCAG00000003484	DDX39B	99	93.286	ENSMZEG00005017654	ddx39b	65	93.286	Maylandia_zebra
ENSPCAG00000003484	DDX39B	100	99.296	ENSMAUG00000008059	Ddx39b	66	99.296	Mesocricetus_auratus
ENSPCAG00000003484	DDX39B	100	99.648	ENSMICG00000017349	DDX39B	66	99.648	Microcebus_murinus
ENSPCAG00000003484	DDX39B	100	99.648	ENSMOCG00000011169	Ddx39b	66	99.648	Microtus_ochrogaster
ENSPCAG00000003484	DDX39B	82	99.138	ENSMODG00000015791	DDX39B	55	99.138	Monodelphis_domestica
ENSPCAG00000003484	DDX39B	100	99.648	ENSMUSG00000019432	Ddx39b	66	99.648	Mus_musculus
ENSPCAG00000003484	DDX39B	100	99.648	MGP_PahariEiJ_G0020513	Ddx39b	66	99.648	Mus_pahari
ENSPCAG00000003484	DDX39B	100	99.648	MGP_SPRETEiJ_G0022424	Ddx39b	66	99.648	Mus_spretus
ENSPCAG00000003484	DDX39B	100	99.648	ENSMPUG00000011407	DDX39B	66	99.648	Mustela_putorius_furo
ENSPCAG00000003484	DDX39B	100	99.648	ENSMLUG00000001681	DDX39B	91	99.648	Myotis_lucifugus
ENSPCAG00000003484	DDX39B	100	99.648	ENSNGAG00000022948	Ddx39b	66	99.648	Nannospalax_galili
ENSPCAG00000003484	DDX39B	100	99.648	ENSNLEG00000006094	DDX39B	80	99.648	Nomascus_leucogenys
ENSPCAG00000003484	DDX39B	78	99.550	ENSMEUG00000008264	DDX39B	52	99.550	Notamacropus_eugenii
ENSPCAG00000003484	DDX39B	100	99.648	ENSOPRG00000011923	DDX39B	66	99.648	Ochotona_princeps
ENSPCAG00000003484	DDX39B	100	99.296	ENSODEG00000018083	DDX39B	66	99.296	Octodon_degus
ENSPCAG00000003484	DDX39B	100	93.662	ENSONIG00000004740	ddx39b	66	93.662	Oreochromis_niloticus
ENSPCAG00000003484	DDX39B	100	99.648	ENSOCUG00000024126	DDX39B	64	99.648	Oryctolagus_cuniculus
ENSPCAG00000003484	DDX39B	100	98.592	ENSOGAG00000028850	-	66	98.592	Otolemur_garnettii
ENSPCAG00000003484	DDX39B	99	97.865	ENSOGAG00000009067	-	87	97.865	Otolemur_garnettii
ENSPCAG00000003484	DDX39B	100	99.648	ENSOARG00000008787	DDX39B	65	99.648	Ovis_aries
ENSPCAG00000003484	DDX39B	100	99.648	ENSPPAG00000043072	DDX39B	69	99.648	Pan_paniscus
ENSPCAG00000003484	DDX39B	100	99.648	ENSPPRG00000001913	DDX39B	68	99.648	Panthera_pardus
ENSPCAG00000003484	DDX39B	100	99.296	ENSPTIG00000017669	DDX39B	66	99.296	Panthera_tigris_altaica
ENSPCAG00000003484	DDX39B	100	99.648	ENSPTRG00000032509	DDX39B	69	99.648	Pan_troglodytes
ENSPCAG00000003484	DDX39B	100	99.648	ENSPANG00000018609	DDX39B	69	99.648	Papio_anubis
ENSPCAG00000003484	DDX39B	100	95.070	ENSPKIG00000011324	ddx39b	65	95.070	Paramormyrops_kingsleyae
ENSPCAG00000003484	DDX39B	100	99.648	ENSPEMG00000016905	Ddx39b	66	99.648	Peromyscus_maniculatus_bairdii
ENSPCAG00000003484	DDX39B	100	99.648	ENSPCIG00000017572	DDX39B	66	99.648	Phascolarctos_cinereus
ENSPCAG00000003484	DDX39B	100	99.648	ENSPPYG00000016433	DDX39B	66	99.648	Pongo_abelii
ENSPCAG00000003484	DDX39B	100	99.648	ENSPCOG00000018656	DDX39B	66	99.648	Propithecus_coquereli
ENSPCAG00000003484	DDX39B	100	99.648	ENSPVAG00000004653	DDX39B	66	99.648	Pteropus_vampyrus
ENSPCAG00000003484	DDX39B	98	79.928	ENSPNYG00000010382	ddx39b	62	79.928	Pundamilia_nyererei
ENSPCAG00000003484	DDX39B	100	95.775	ENSPNAG00000026926	ddx39b	65	95.775	Pygocentrus_nattereri
ENSPCAG00000003484	DDX39B	100	99.648	ENSRNOG00000000841	Ddx39b	66	99.648	Rattus_norvegicus
ENSPCAG00000003484	DDX39B	100	84.155	ENSRBIG00000031309	DDX39B	63	84.155	Rhinopithecus_bieti
ENSPCAG00000003484	DDX39B	100	99.648	ENSRROG00000039517	DDX39B	69	99.648	Rhinopithecus_roxellana
ENSPCAG00000003484	DDX39B	100	84.155	ENSSBOG00000035513	-	63	84.155	Saimiri_boliviensis_boliviensis
ENSPCAG00000003484	DDX39B	100	99.648	ENSSHAG00000003209	DDX39B	66	99.648	Sarcophilus_harrisii
ENSPCAG00000003484	DDX39B	100	95.070	ENSSFOG00015016107	ddx39b	66	95.070	Scleropages_formosus
ENSPCAG00000003484	DDX39B	100	95.775	ENSSDUG00000011557	ddx39b	66	95.775	Seriola_dumerili
ENSPCAG00000003484	DDX39B	100	95.423	ENSSLDG00000015763	ddx39b	66	95.423	Seriola_lalandi_dorsalis
ENSPCAG00000003484	DDX39B	81	80.435	ENSSARG00000005245	DDX39B	61	80.435	Sorex_araneus
ENSPCAG00000003484	DDX39B	100	99.296	ENSSPUG00000012805	DDX39B	66	99.296	Sphenodon_punctatus
ENSPCAG00000003484	DDX39B	100	99.648	ENSSSCG00000001400	DDX39B	82	99.648	Sus_scrofa
ENSPCAG00000003484	DDX39B	100	75.704	ENSTBEG00000003721	DDX39B	66	75.704	Tupaia_belangeri
ENSPCAG00000003484	DDX39B	88	99.200	ENSTTRG00000014074	DDX39B	58	99.200	Tursiops_truncatus
ENSPCAG00000003484	DDX39B	100	80.420	ENSUAMG00000027335	DDX39B	65	80.420	Ursus_americanus
ENSPCAG00000003484	DDX39B	100	94.014	ENSUMAG00000015124	DDX39B	69	94.014	Ursus_maritimus
ENSPCAG00000003484	DDX39B	100	99.648	ENSVVUG00000019518	DDX39B	66	99.648	Vulpes_vulpes
ENSPCAG00000003484	DDX39B	92	85.606	ENSXETG00000002498	ddx39b	61	85.606	Xenopus_tropicalis