EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000003490 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 14955 bases
Position: chrGeneScaffold_7167:10792-25746
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003310	R3H	PF01424.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003530	-	2946	-	ENSPCAP00000003310	981 (aa)	-	UPI00018ADC25

Gene Model

Click here to download ENSPCAG00000003490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003490	-	60	89.286	ENSG00000132740	IGHMBP2	97	89.286	Homo_sapiens
ENSPCAG00000003490	-	55	59.375	ENSAPOG00000009399	ighmbp2	54	59.375	Acanthochromis_polyacanthus
ENSPCAG00000003490	-	59	85.714	ENSAMEG00000008568	IGHMBP2	59	85.714	Ailuropoda_melanoleuca
ENSPCAG00000003490	-	55	57.812	ENSACIG00000004670	ighmbp2	55	57.812	Amphilophus_citrinellus
ENSPCAG00000003490	-	55	59.375	ENSAOCG00000019390	ighmbp2	55	59.375	Amphiprion_ocellaris
ENSPCAG00000003490	-	55	59.375	ENSAPEG00000021713	ighmbp2	55	59.375	Amphiprion_percula
ENSPCAG00000003490	-	55	60.938	ENSATEG00000010246	ighmbp2	52	60.938	Anabas_testudineus
ENSPCAG00000003490	-	63	50.233	ENSAPLG00000003251	IGHMBP2	57	75.385	Anas_platyrhynchos
ENSPCAG00000003490	-	54	71.429	ENSACAG00000013702	IGHMBP2	56	70.769	Anolis_carolinensis
ENSPCAG00000003490	-	57	76.190	ENSANAG00000027309	IGHMBP2	58	76.190	Aotus_nancymaae
ENSPCAG00000003490	-	55	57.812	ENSACLG00000014140	ighmbp2	55	57.812	Astatotilapia_calliptera
ENSPCAG00000003490	-	58	60.000	ENSAMXG00000000503	ighmbp2	56	60.000	Astyanax_mexicanus
ENSPCAG00000003490	-	56	80.000	ENSBTAG00000022185	IGHMBP2	56	80.000	Bos_taurus
ENSPCAG00000003490	-	57	76.190	ENSCJAG00000015887	IGHMBP2	57	85.714	Callithrix_jacchus
ENSPCAG00000003490	-	57	81.818	ENSCAFG00000010745	IGHMBP2	60	85.714	Canis_familiaris
ENSPCAG00000003490	-	57	81.818	ENSCAFG00020015362	IGHMBP2	72	83.077	Canis_lupus_dingo
ENSPCAG00000003490	-	58	80.000	ENSCHIG00000011703	IGHMBP2	56	80.000	Capra_hircus
ENSPCAG00000003490	-	56	79.365	ENSCAPG00000001471	IGHMBP2	56	79.365	Cavia_aperea
ENSPCAG00000003490	-	56	79.365	ENSCPOG00000007063	IGHMBP2	53	79.365	Cavia_porcellus
ENSPCAG00000003490	-	57	77.778	ENSCCAG00000027106	IGHMBP2	60	85.714	Cebus_capucinus
ENSPCAG00000003490	-	56	89.286	ENSCATG00000031229	IGHMBP2	59	89.286	Cercocebus_atys
ENSPCAG00000003490	-	56	76.190	ENSCLAG00000015500	IGHMBP2	56	76.190	Chinchilla_lanigera
ENSPCAG00000003490	-	56	89.286	ENSCSAG00000009185	IGHMBP2	57	89.286	Chlorocebus_sabaeus
ENSPCAG00000003490	-	51	53.257	ENSCPBG00000008799	IGHMBP2	53	53.937	Chrysemys_picta_bellii
ENSPCAG00000003490	-	53	50.769	ENSCING00000005102	zf(an1/a20like)-2	52	50.769	Ciona_intestinalis
ENSPCAG00000003490	-	54	52.459	ENSCSAVG00000006222	-	73	53.333	Ciona_savignyi
ENSPCAG00000003490	-	60	85.714	ENSCANG00000043714	IGHMBP2	60	85.714	Colobus_angolensis_palliatus
ENSPCAG00000003490	-	57	75.385	ENSCGRG00001019126	Ighmbp2	57	75.385	Cricetulus_griseus_chok1gshd
ENSPCAG00000003490	-	57	75.385	ENSCGRG00000009642	Ighmbp2	57	75.385	Cricetulus_griseus_crigri
ENSPCAG00000003490	-	55	58.065	ENSCSEG00000007513	ighmbp2	54	58.065	Cynoglossus_semilaevis
ENSPCAG00000003490	-	56	59.375	ENSCVAG00000007876	ighmbp2	58	59.375	Cyprinodon_variegatus
ENSPCAG00000003490	-	56	60.938	ENSDARG00000069274	ighmbp2	56	60.938	Danio_rerio
ENSPCAG00000003490	-	55	81.818	ENSDNOG00000002334	IGHMBP2	57	83.077	Dasypus_novemcinctus
ENSPCAG00000003490	-	51	75.385	ENSETEG00000003178	IGHMBP2	51	75.385	Echinops_telfairi
ENSPCAG00000003490	-	56	50.000	ENSEBUG00000010471	ighmbp2	57	50.000	Eptatretus_burgeri
ENSPCAG00000003490	-	60	85.714	ENSEASG00005007735	IGHMBP2	59	85.714	Equus_asinus_asinus
ENSPCAG00000003490	-	54	83.871	ENSECAG00000019360	IGHMBP2	56	85.714	Equus_caballus
ENSPCAG00000003490	-	56	57.812	ENSELUG00000023450	ighmbp2	60	57.812	Esox_lucius
ENSPCAG00000003490	-	59	89.286	ENSFCAG00000010879	IGHMBP2	59	89.286	Felis_catus
ENSPCAG00000003490	-	57	73.214	ENSFALG00000011604	IGHMBP2	57	73.846	Ficedula_albicollis
ENSPCAG00000003490	-	56	59.375	ENSFHEG00000021211	ighmbp2	56	59.375	Fundulus_heteroclitus
ENSPCAG00000003490	-	56	60.317	ENSGMOG00000017553	ighmbp2	56	60.317	Gadus_morhua
ENSPCAG00000003490	-	57	66.071	ENSGALG00000004328	IGHMBP2	56	67.692	Gallus_gallus
ENSPCAG00000003490	-	56	60.938	ENSGAFG00000020770	ighmbp2	56	60.938	Gambusia_affinis
ENSPCAG00000003490	-	55	56.250	ENSGACG00000005293	ighmbp2	56	56.250	Gasterosteus_aculeatus
ENSPCAG00000003490	-	57	73.333	ENSGAGG00000020312	IGHMBP2	52	75.385	Gopherus_agassizii
ENSPCAG00000003490	-	60	89.286	ENSGGOG00000012131	IGHMBP2	60	89.286	Gorilla_gorilla
ENSPCAG00000003490	-	58	57.812	ENSHBUG00000018318	ighmbp2	55	57.812	Haplochromis_burtoni
ENSPCAG00000003490	-	56	79.365	ENSHGLG00000006468	IGHMBP2	56	79.365	Heterocephalus_glaber_female
ENSPCAG00000003490	-	56	79.365	ENSHGLG00100009290	IGHMBP2	56	79.365	Heterocephalus_glaber_male
ENSPCAG00000003490	-	55	57.812	ENSHCOG00000018786	ighmbp2	54	57.812	Hippocampus_comes
ENSPCAG00000003490	-	50	64.062	ENSIPUG00000023036	ighmbp2	55	64.062	Ictalurus_punctatus
ENSPCAG00000003490	-	59	85.714	ENSSTOG00000003792	IGHMBP2	55	85.714	Ictidomys_tridecemlineatus
ENSPCAG00000003490	-	56	78.462	ENSJJAG00000022964	Ighmbp2	56	78.462	Jaculus_jaculus
ENSPCAG00000003490	-	56	58.730	ENSKMAG00000020284	ighmbp2	58	58.730	Kryptolebias_marmoratus
ENSPCAG00000003490	-	55	57.143	ENSLBEG00000014501	ighmbp2	54	57.143	Labrus_bergylta
ENSPCAG00000003490	-	57	58.929	ENSLACG00000018792	IGHMBP2	58	60.000	Latimeria_chalumnae
ENSPCAG00000003490	-	56	61.905	ENSLOCG00000001512	ighmbp2	57	62.903	Lepisosteus_oculatus
ENSPCAG00000003490	-	57	92.308	ENSLAFG00000022445	IGHMBP2	76	92.308	Loxodonta_africana
ENSPCAG00000003490	-	56	89.286	ENSMFAG00000043909	IGHMBP2	57	89.286	Macaca_fascicularis
ENSPCAG00000003490	-	61	89.286	ENSMNEG00000043511	IGHMBP2	61	89.286	Macaca_nemestrina
ENSPCAG00000003490	-	56	89.286	ENSMLEG00000043529	IGHMBP2	61	89.286	Mandrillus_leucophaeus
ENSPCAG00000003490	-	55	56.250	ENSMAMG00000005532	ighmbp2	57	56.250	Mastacembelus_armatus
ENSPCAG00000003490	-	55	57.812	ENSMZEG00005000665	ighmbp2	55	57.812	Maylandia_zebra
ENSPCAG00000003490	-	55	67.857	ENSMGAG00000002792	IGHMBP2	56	69.231	Meleagris_gallopavo
ENSPCAG00000003490	-	56	75.385	ENSMAUG00000019893	Ighmbp2	56	75.385	Mesocricetus_auratus
ENSPCAG00000003490	-	60	89.286	ENSMICG00000043944	IGHMBP2	64	89.286	Microcebus_murinus
ENSPCAG00000003490	-	56	76.923	ENSMOCG00000018939	Ighmbp2	56	76.923	Microtus_ochrogaster
ENSPCAG00000003490	-	55	60.317	ENSMMOG00000001234	ighmbp2	54	60.317	Mola_mola
ENSPCAG00000003490	-	55	60.938	ENSMALG00000006457	ighmbp2	55	60.938	Monopterus_albus
ENSPCAG00000003490	-	57	75.385	MGP_CAROLIEiJ_G0022463	Ighmbp2	57	75.385	Mus_caroli
ENSPCAG00000003490	-	57	75.385	ENSMUSG00000024831	Ighmbp2	57	75.385	Mus_musculus
ENSPCAG00000003490	-	57	78.462	MGP_PahariEiJ_G0013960	Ighmbp2	57	78.462	Mus_pahari
ENSPCAG00000003490	-	57	75.385	MGP_SPRETEiJ_G0014700	Ighmbp2	57	75.385	Mus_spretus
ENSPCAG00000003490	-	56	78.462	ENSMPUG00000004439	IGHMBP2	58	78.462	Mustela_putorius_furo
ENSPCAG00000003490	-	56	75.385	ENSNGAG00000006566	Ighmbp2	56	75.385	Nannospalax_galili
ENSPCAG00000003490	-	60	89.286	ENSNLEG00000006609	IGHMBP2	62	89.286	Nomascus_leucogenys
ENSPCAG00000003490	-	56	76.190	ENSODEG00000017354	IGHMBP2	56	76.190	Octodon_degus
ENSPCAG00000003490	-	55	59.375	ENSONIG00000015506	ighmbp2	55	59.375	Oreochromis_niloticus
ENSPCAG00000003490	-	57	58.462	ENSORLG00000006561	ighmbp2	56	59.375	Oryzias_latipes
ENSPCAG00000003490	-	58	59.375	ENSORLG00020008462	ighmbp2	56	59.375	Oryzias_latipes_hni
ENSPCAG00000003490	-	56	59.375	ENSORLG00015001563	ighmbp2	57	59.375	Oryzias_latipes_hsok
ENSPCAG00000003490	-	56	60.938	ENSOMEG00000019296	ighmbp2	56	60.938	Oryzias_melastigma
ENSPCAG00000003490	-	67	89.286	ENSOGAG00000011671	IGHMBP2	60	89.286	Otolemur_garnettii
ENSPCAG00000003490	-	51	80.000	ENSOARG00000016959	IGHMBP2	51	80.000	Ovis_aries
ENSPCAG00000003490	-	60	89.286	ENSPPAG00000027355	IGHMBP2	60	89.286	Pan_paniscus
ENSPCAG00000003490	-	57	89.286	ENSPPRG00000024194	IGHMBP2	59	89.286	Panthera_pardus
ENSPCAG00000003490	-	60	89.286	ENSPTRG00000003989	IGHMBP2	60	89.286	Pan_troglodytes
ENSPCAG00000003490	-	56	89.286	ENSPANG00000023650	IGHMBP2	59	89.286	Papio_anubis
ENSPCAG00000003490	-	56	58.462	ENSPKIG00000019306	ighmbp2	56	58.462	Paramormyrops_kingsleyae
ENSPCAG00000003490	-	50	54.618	ENSPSIG00000015808	IGHMBP2	54	54.418	Pelodiscus_sinensis
ENSPCAG00000003490	-	57	75.385	ENSPEMG00000017775	Ighmbp2	57	75.385	Peromyscus_maniculatus_bairdii
ENSPCAG00000003490	-	56	60.938	ENSPFOG00000010607	ighmbp2	58	60.938	Poecilia_formosa
ENSPCAG00000003490	-	56	60.938	ENSPLAG00000003917	ighmbp2	56	60.938	Poecilia_latipinna
ENSPCAG00000003490	-	56	60.938	ENSPMEG00000021063	ighmbp2	56	60.938	Poecilia_mexicana
ENSPCAG00000003490	-	56	57.812	ENSPREG00000011223	ighmbp2	56	57.812	Poecilia_reticulata
ENSPCAG00000003490	-	57	74.603	ENSPPYG00000002965	-	87	74.603	Pongo_abelii
ENSPCAG00000003490	-	60	89.286	ENSPCOG00000018759	IGHMBP2	59	89.286	Propithecus_coquereli
ENSPCAG00000003490	-	55	57.812	ENSPNYG00000015003	ighmbp2	55	57.812	Pundamilia_nyererei
ENSPCAG00000003490	-	55	62.500	ENSPNAG00000013815	ighmbp2	55	62.500	Pygocentrus_nattereri
ENSPCAG00000003490	-	55	75.385	ENSRNOG00000013456	Ighmbp2	55	75.385	Rattus_norvegicus
ENSPCAG00000003490	-	59	89.286	ENSRBIG00000044249	IGHMBP2	60	89.286	Rhinopithecus_bieti
ENSPCAG00000003490	-	59	89.286	ENSRROG00000045646	IGHMBP2	60	89.286	Rhinopithecus_roxellana
ENSPCAG00000003490	-	59	89.286	ENSSBOG00000021342	IGHMBP2	61	89.286	Saimiri_boliviensis_boliviensis
ENSPCAG00000003490	-	50	67.692	ENSSHAG00000001585	-	67	67.692	Sarcophilus_harrisii
ENSPCAG00000003490	-	58	60.000	ENSSFOG00015016074	ighmbp2	50	60.000	Scleropages_formosus
ENSPCAG00000003490	-	55	56.250	ENSSMAG00000013687	ighmbp2	55	56.250	Scophthalmus_maximus
ENSPCAG00000003490	-	55	59.375	ENSSDUG00000013150	ighmbp2	55	59.375	Seriola_dumerili
ENSPCAG00000003490	-	55	59.375	ENSSLDG00000023119	ighmbp2	55	59.375	Seriola_lalandi_dorsalis
ENSPCAG00000003490	-	55	69.643	ENSSPUG00000008810	IGHMBP2	85	70.769	Sphenodon_punctatus
ENSPCAG00000003490	-	55	59.677	ENSSPAG00000011541	ighmbp2	54	59.677	Stegastes_partitus
ENSPCAG00000003490	-	60	89.286	ENSSSCG00000012878	IGHMBP2	58	89.286	Sus_scrofa
ENSPCAG00000003490	-	57	71.429	ENSTGUG00000006705	-	59	70.769	Taeniopygia_guttata
ENSPCAG00000003490	-	55	57.143	ENSTRUG00000003491	ighmbp2	54	57.143	Takifugu_rubripes
ENSPCAG00000003490	-	55	56.923	ENSTNIG00000016069	ighmbp2	54	56.923	Tetraodon_nigroviridis
ENSPCAG00000003490	-	56	78.462	ENSTTRG00000013636	IGHMBP2	56	78.462	Tursiops_truncatus
ENSPCAG00000003490	-	59	85.714	ENSUAMG00000024817	IGHMBP2	60	85.714	Ursus_americanus
ENSPCAG00000003490	-	54	84.127	ENSUMAG00000018347	IGHMBP2	55	84.127	Ursus_maritimus
ENSPCAG00000003490	-	57	83.636	ENSVVUG00000004811	IGHMBP2	57	84.615	Vulpes_vulpes
ENSPCAG00000003490	-	64	46.635	ENSXETG00000031258	IGHMBP2	60	61.905	Xenopus_tropicalis
ENSPCAG00000003490	-	56	59.375	ENSXCOG00000003758	ighmbp2	56	59.375	Xiphophorus_couchianus
ENSPCAG00000003490	-	56	59.375	ENSXMAG00000003705	ighmbp2	56	59.375	Xiphophorus_maculatus