EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000003698 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 7099 bases
Position: chrGeneScaffold_6392:122771-129869
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003517	zf-CCCH	PF00642.24	1.4e-06	1	1
ENSPCAP00000003517	TRM	PF02005.16	7.9e-139	1	1
ENSPCAP00000003517	Met_10	PF02475.16	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000003745	TRMT1-201	1962	-	ENSPCAP00000003517	653 (aa)	-	UPI00018B0CA9

Gene Model

Click here to download ENSPCAG00000003698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000003698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000003698	TRMT1	98	80.685	ENSG00000104907	TRMT1	100	93.717	Homo_sapiens
ENSPCAG00000003698	TRMT1	99	79.134	ENSAMEG00000012598	TRMT1	96	79.134	Ailuropoda_melanoleuca
ENSPCAG00000003698	TRMT1	91	53.859	ENSACIG00000018680	trmt1	91	53.859	Amphilophus_citrinellus
ENSPCAG00000003698	TRMT1	92	60.199	ENSAOCG00000006781	trmt1	89	60.199	Amphiprion_ocellaris
ENSPCAG00000003698	TRMT1	92	60.199	ENSAPEG00000007712	trmt1	89	60.199	Amphiprion_percula
ENSPCAG00000003698	TRMT1	88	63.002	ENSATEG00000001872	trmt1	84	63.002	Anabas_testudineus
ENSPCAG00000003698	TRMT1	91	62.207	ENSACAG00000003825	TRMT1	96	62.207	Anolis_carolinensis
ENSPCAG00000003698	TRMT1	99	75.231	ENSANAG00000023016	TRMT1	99	77.508	Aotus_nancymaae
ENSPCAG00000003698	TRMT1	87	59.720	ENSACLG00000010073	trmt1	92	59.720	Astatotilapia_calliptera
ENSPCAG00000003698	TRMT1	88	63.021	ENSAMXG00000012026	trmt1	85	63.021	Astyanax_mexicanus
ENSPCAG00000003698	TRMT1	99	78.154	ENSBTAG00000019325	TRMT1	92	78.154	Bos_taurus
ENSPCAG00000003698	TRMT1	82	37.937	WBGene00006613	trm-1	97	37.937	Caenorhabditis_elegans
ENSPCAG00000003698	TRMT1	99	74.962	ENSCJAG00000004566	TRMT1	99	74.962	Callithrix_jacchus
ENSPCAG00000003698	TRMT1	99	80.680	ENSCAFG00000017070	TRMT1	99	80.794	Canis_familiaris
ENSPCAG00000003698	TRMT1	99	79.535	ENSCAFG00020005397	TRMT1	98	76.816	Canis_lupus_dingo
ENSPCAG00000003698	TRMT1	99	77.508	ENSCHIG00000013569	TRMT1	99	77.508	Capra_hircus
ENSPCAG00000003698	TRMT1	98	75.000	ENSTSYG00000003207	TRMT1	99	74.769	Carlito_syrichta
ENSPCAG00000003698	TRMT1	86	71.530	ENSCAPG00000003355	TRMT1	98	71.530	Cavia_aperea
ENSPCAG00000003698	TRMT1	99	75.231	ENSCPOG00000011754	TRMT1	98	75.231	Cavia_porcellus
ENSPCAG00000003698	TRMT1	99	74.729	ENSCCAG00000022263	TRMT1	99	76.499	Cebus_capucinus
ENSPCAG00000003698	TRMT1	99	79.692	ENSCATG00000039850	TRMT1	98	79.692	Cercocebus_atys
ENSPCAG00000003698	TRMT1	85	66.234	ENSCATG00000038220	-	97	66.234	Cercocebus_atys
ENSPCAG00000003698	TRMT1	99	78.019	ENSCLAG00000015295	TRMT1	95	78.019	Chinchilla_lanigera
ENSPCAG00000003698	TRMT1	80	79.048	ENSCSAG00000006500	TRMT1	99	79.048	Chlorocebus_sabaeus
ENSPCAG00000003698	TRMT1	91	63.621	ENSCPBG00000023866	TRMT1	87	63.621	Chrysemys_picta_bellii
ENSPCAG00000003698	TRMT1	85	43.929	ENSCING00000002884	-	98	43.929	Ciona_intestinalis
ENSPCAG00000003698	TRMT1	84	43.682	ENSCSAVG00000010927	-	100	43.680	Ciona_savignyi
ENSPCAG00000003698	TRMT1	99	65.271	ENSCANG00000040631	TRMT1	98	65.271	Colobus_angolensis_palliatus
ENSPCAG00000003698	TRMT1	93	61.967	ENSCANG00000031650	-	95	61.951	Colobus_angolensis_palliatus
ENSPCAG00000003698	TRMT1	99	75.809	ENSCGRG00001022594	Trmt1	97	75.809	Cricetulus_griseus_chok1gshd
ENSPCAG00000003698	TRMT1	99	75.809	ENSCGRG00000017732	Trmt1	97	75.809	Cricetulus_griseus_crigri
ENSPCAG00000003698	TRMT1	87	61.189	ENSCSEG00000001643	trmt1	84	61.988	Cynoglossus_semilaevis
ENSPCAG00000003698	TRMT1	87	62.697	ENSCVAG00000011886	trmt1	85	62.697	Cyprinodon_variegatus
ENSPCAG00000003698	TRMT1	87	61.419	ENSDARG00000010978	trmt1	85	61.419	Danio_rerio
ENSPCAG00000003698	TRMT1	84	54.973	ENSDNOG00000048240	-	94	54.973	Dasypus_novemcinctus
ENSPCAG00000003698	TRMT1	99	75.420	ENSDORG00000014298	Trmt1	99	75.420	Dipodomys_ordii
ENSPCAG00000003698	TRMT1	78	44.466	FBgn0032430	CG6388	87	44.466	Drosophila_melanogaster
ENSPCAG00000003698	TRMT1	54	74.740	ENSETEG00000015483	-	54	74.740	Echinops_telfairi
ENSPCAG00000003698	TRMT1	79	51.451	ENSEBUG00000003449	trmt1	76	51.336	Eptatretus_burgeri
ENSPCAG00000003698	TRMT1	96	78.205	ENSEASG00005004050	TRMT1	99	78.060	Equus_asinus_asinus
ENSPCAG00000003698	TRMT1	96	78.526	ENSECAG00000016149	TRMT1	99	78.378	Equus_caballus
ENSPCAG00000003698	TRMT1	61	75.819	ENSEEUG00000014102	-	100	75.819	Erinaceus_europaeus
ENSPCAG00000003698	TRMT1	93	59.046	ENSELUG00000021659	trmt1	90	59.046	Esox_lucius
ENSPCAG00000003698	TRMT1	99	79.483	ENSFCAG00000000483	TRMT1	99	79.483	Felis_catus
ENSPCAG00000003698	TRMT1	99	76.543	ENSFDAG00000007386	TRMT1	98	76.543	Fukomys_damarensis
ENSPCAG00000003698	TRMT1	91	58.872	ENSFHEG00000012865	trmt1	90	62.431	Fundulus_heteroclitus
ENSPCAG00000003698	TRMT1	88	55.672	ENSGMOG00000006564	trmt1	98	55.672	Gadus_morhua
ENSPCAG00000003698	TRMT1	91	61.745	ENSGAFG00000011862	trmt1	92	61.745	Gambusia_affinis
ENSPCAG00000003698	TRMT1	95	55.538	ENSGACG00000000227	trmt1	99	55.538	Gasterosteus_aculeatus
ENSPCAG00000003698	TRMT1	94	62.500	ENSGAGG00000016432	TRMT1	90	62.500	Gopherus_agassizii
ENSPCAG00000003698	TRMT1	98	80.715	ENSGGOG00000014007	TRMT1	98	80.556	Gorilla_gorilla
ENSPCAG00000003698	TRMT1	88	53.368	ENSHBUG00000008821	trmt1	94	53.368	Haplochromis_burtoni
ENSPCAG00000003698	TRMT1	99	77.607	ENSHGLG00000015972	TRMT1	98	77.607	Heterocephalus_glaber_female
ENSPCAG00000003698	TRMT1	99	71.669	ENSHGLG00100018112	TRMT1	98	71.669	Heterocephalus_glaber_male
ENSPCAG00000003698	TRMT1	88	58.813	ENSHCOG00000009447	trmt1	88	58.813	Hippocampus_comes
ENSPCAG00000003698	TRMT1	89	60.000	ENSIPUG00000002899	trmt1	86	60.000	Ictalurus_punctatus
ENSPCAG00000003698	TRMT1	99	77.812	ENSSTOG00000012531	TRMT1	99	77.812	Ictidomys_tridecemlineatus
ENSPCAG00000003698	TRMT1	95	75.323	ENSJJAG00000017154	Trmt1	97	73.879	Jaculus_jaculus
ENSPCAG00000003698	TRMT1	87	62.872	ENSKMAG00000011809	trmt1	95	62.697	Kryptolebias_marmoratus
ENSPCAG00000003698	TRMT1	87	62.697	ENSLBEG00000012703	trmt1	84	62.697	Labrus_bergylta
ENSPCAG00000003698	TRMT1	87	52.613	ENSLACG00000014585	TRMT1	93	52.613	Latimeria_chalumnae
ENSPCAG00000003698	TRMT1	87	57.363	ENSLOCG00000006479	trmt1	97	58.103	Lepisosteus_oculatus
ENSPCAG00000003698	TRMT1	99	82.844	ENSLAFG00000014072	TRMT1	99	82.844	Loxodonta_africana
ENSPCAG00000003698	TRMT1	99	79.846	ENSMFAG00000033143	TRMT1	98	79.846	Macaca_fascicularis
ENSPCAG00000003698	TRMT1	99	73.344	ENSMMUG00000001167	TRMT1	99	73.344	Macaca_mulatta
ENSPCAG00000003698	TRMT1	94	87.200	ENSMNEG00000037867	TRMT1	98	79.846	Macaca_nemestrina
ENSPCAG00000003698	TRMT1	99	79.538	ENSMLEG00000016142	TRMT1	99	79.538	Mandrillus_leucophaeus
ENSPCAG00000003698	TRMT1	91	61.037	ENSMAMG00000004357	trmt1	88	61.037	Mastacembelus_armatus
ENSPCAG00000003698	TRMT1	87	60.245	ENSMZEG00005014510	trmt1	85	60.245	Maylandia_zebra
ENSPCAG00000003698	TRMT1	98	75.389	ENSMAUG00000011134	Trmt1	99	74.091	Mesocricetus_auratus
ENSPCAG00000003698	TRMT1	99	80.184	ENSMICG00000000793	TRMT1	98	80.184	Microcebus_murinus
ENSPCAG00000003698	TRMT1	99	75.000	ENSMOCG00000015895	Trmt1	97	74.730	Microtus_ochrogaster
ENSPCAG00000003698	TRMT1	87	60.832	ENSMMOG00000011097	trmt1	92	60.832	Mola_mola
ENSPCAG00000003698	TRMT1	93	69.572	ENSMODG00000011619	TRMT1	98	69.572	Monodelphis_domestica
ENSPCAG00000003698	TRMT1	99	75.926	MGP_CAROLIEiJ_G0031304	Trmt1	97	75.926	Mus_caroli
ENSPCAG00000003698	TRMT1	99	75.501	ENSMUSG00000001909	Trmt1	97	75.501	Mus_musculus
ENSPCAG00000003698	TRMT1	99	75.347	MGP_SPRETEiJ_G0032422	Trmt1	97	75.347	Mus_spretus
ENSPCAG00000003698	TRMT1	99	79.167	ENSMPUG00000004210	TRMT1	93	79.167	Mustela_putorius_furo
ENSPCAG00000003698	TRMT1	99	77.778	ENSMLUG00000012809	TRMT1	98	77.778	Myotis_lucifugus
ENSPCAG00000003698	TRMT1	97	74.143	ENSNGAG00000022486	Trmt1	96	74.143	Nannospalax_galili
ENSPCAG00000003698	TRMT1	76	64.179	ENSNBRG00000024376	trmt1	85	64.179	Neolamprologus_brichardi
ENSPCAG00000003698	TRMT1	76	85.890	ENSNLEG00000013019	-	94	85.119	Nomascus_leucogenys
ENSPCAG00000003698	TRMT1	89	70.639	ENSMEUG00000013756	TRMT1	98	70.639	Notamacropus_eugenii
ENSPCAG00000003698	TRMT1	80	85.036	ENSOPRG00000009471	-	79	85.036	Ochotona_princeps
ENSPCAG00000003698	TRMT1	99	78.140	ENSODEG00000010323	TRMT1	98	78.140	Octodon_degus
ENSPCAG00000003698	TRMT1	95	59.968	ENSONIG00000000400	trmt1	99	59.968	Oreochromis_niloticus
ENSPCAG00000003698	TRMT1	80	79.159	ENSOCUG00000021934	TRMT1	99	79.159	Oryctolagus_cuniculus
ENSPCAG00000003698	TRMT1	90	57.621	ENSORLG00000020074	trmt1	93	57.621	Oryzias_latipes
ENSPCAG00000003698	TRMT1	90	60.508	ENSORLG00020007561	trmt1	92	60.169	Oryzias_latipes_hni
ENSPCAG00000003698	TRMT1	90	60.678	ENSORLG00015006547	trmt1	89	60.678	Oryzias_latipes_hsok
ENSPCAG00000003698	TRMT1	95	58.386	ENSOMEG00000019343	trmt1	95	58.386	Oryzias_melastigma
ENSPCAG00000003698	TRMT1	96	77.690	ENSOGAG00000025576	TRMT1	99	77.690	Otolemur_garnettii
ENSPCAG00000003698	TRMT1	99	62.730	ENSOARG00000009397	TRMT1	92	63.190	Ovis_aries
ENSPCAG00000003698	TRMT1	98	71.341	ENSPPRG00000012117	TRMT1	99	71.341	Panthera_pardus
ENSPCAG00000003698	TRMT1	76	80.571	ENSPTIG00000008833	TRMT1	96	80.571	Panthera_tigris_altaica
ENSPCAG00000003698	TRMT1	98	80.560	ENSPTRG00000010557	TRMT1	98	80.401	Pan_troglodytes
ENSPCAG00000003698	TRMT1	98	59.565	ENSPTRG00000050421	-	98	59.565	Pan_troglodytes
ENSPCAG00000003698	TRMT1	85	64.990	ENSPANG00000034058	-	94	64.990	Papio_anubis
ENSPCAG00000003698	TRMT1	99	80.062	ENSPANG00000009247	TRMT1	98	80.062	Papio_anubis
ENSPCAG00000003698	TRMT1	88	63.176	ENSPKIG00000005309	trmt1	84	63.176	Paramormyrops_kingsleyae
ENSPCAG00000003698	TRMT1	96	53.218	ENSPSIG00000008762	TRMT1	90	53.375	Pelodiscus_sinensis
ENSPCAG00000003698	TRMT1	91	59.228	ENSPMGG00000019764	trmt1	94	59.228	Periophthalmus_magnuspinnatus
ENSPCAG00000003698	TRMT1	99	77.174	ENSPEMG00000016247	Trmt1	99	75.946	Peromyscus_maniculatus_bairdii
ENSPCAG00000003698	TRMT1	88	55.846	ENSPMAG00000004329	trmt1	89	55.846	Petromyzon_marinus
ENSPCAG00000003698	TRMT1	96	68.297	ENSPCIG00000019273	TRMT1	98	68.297	Phascolarctos_cinereus
ENSPCAG00000003698	TRMT1	91	63.423	ENSPFOG00000008527	trmt1	92	63.423	Poecilia_formosa
ENSPCAG00000003698	TRMT1	91	63.423	ENSPLAG00000018788	trmt1	92	65.065	Poecilia_latipinna
ENSPCAG00000003698	TRMT1	91	63.423	ENSPMEG00000013120	trmt1	92	63.423	Poecilia_mexicana
ENSPCAG00000003698	TRMT1	87	64.273	ENSPREG00000000211	trmt1	85	64.273	Poecilia_reticulata
ENSPCAG00000003698	TRMT1	98	80.249	ENSPPYG00000009622	TRMT1	98	80.093	Pongo_abelii
ENSPCAG00000003698	TRMT1	99	80.000	ENSPCOG00000008653	TRMT1	99	80.000	Propithecus_coquereli
ENSPCAG00000003698	TRMT1	99	79.598	ENSPVAG00000015076	TRMT1	98	79.598	Pteropus_vampyrus
ENSPCAG00000003698	TRMT1	87	58.669	ENSPNYG00000013960	trmt1	92	58.669	Pundamilia_nyererei
ENSPCAG00000003698	TRMT1	82	65.208	ENSPNAG00000024859	trmt1	88	65.208	Pygocentrus_nattereri
ENSPCAG00000003698	TRMT1	96	76.592	ENSRNOG00000002914	Trmt1	98	76.592	Rattus_norvegicus
ENSPCAG00000003698	TRMT1	99	80.000	ENSRBIG00000038324	TRMT1	98	80.000	Rhinopithecus_bieti
ENSPCAG00000003698	TRMT1	94	61.526	ENSRBIG00000037505	-	97	61.514	Rhinopithecus_bieti
ENSPCAG00000003698	TRMT1	99	79.846	ENSRROG00000028599	TRMT1	98	79.846	Rhinopithecus_roxellana
ENSPCAG00000003698	TRMT1	94	61.039	ENSRROG00000031847	-	96	61.031	Rhinopithecus_roxellana
ENSPCAG00000003698	TRMT1	78	35.261	YDR120C	-	92	35.261	Saccharomyces_cerevisiae
ENSPCAG00000003698	TRMT1	99	74.729	ENSSBOG00000028861	TRMT1	99	76.013	Saimiri_boliviensis_boliviensis
ENSPCAG00000003698	TRMT1	88	71.750	ENSSHAG00000014381	TRMT1	94	71.649	Sarcophilus_harrisii
ENSPCAG00000003698	TRMT1	88	61.955	ENSSFOG00015004139	trmt1	84	61.955	Scleropages_formosus
ENSPCAG00000003698	TRMT1	87	62.063	ENSSMAG00000021136	trmt1	85	62.063	Scophthalmus_maximus
ENSPCAG00000003698	TRMT1	87	63.047	ENSSDUG00000012740	trmt1	84	63.047	Seriola_dumerili
ENSPCAG00000003698	TRMT1	87	63.047	ENSSLDG00000005971	trmt1	84	63.047	Seriola_lalandi_dorsalis
ENSPCAG00000003698	TRMT1	87	76.014	ENSSARG00000005138	TRMT1	99	76.014	Sorex_araneus
ENSPCAG00000003698	TRMT1	88	48.270	ENSSPUG00000001084	TRMT1	90	48.616	Sphenodon_punctatus
ENSPCAG00000003698	TRMT1	92	58.706	ENSSPAG00000007153	trmt1	99	58.706	Stegastes_partitus
ENSPCAG00000003698	TRMT1	96	80.159	ENSSSCG00000013744	TRMT1	99	80.159	Sus_scrofa
ENSPCAG00000003698	TRMT1	87	57.913	ENSTRUG00000010700	trmt1	86	57.913	Takifugu_rubripes
ENSPCAG00000003698	TRMT1	88	61.955	ENSTNIG00000018808	trmt1	98	61.955	Tetraodon_nigroviridis
ENSPCAG00000003698	TRMT1	99	76.344	ENSTTRG00000006379	TRMT1	99	76.344	Tursiops_truncatus
ENSPCAG00000003698	TRMT1	99	79.503	ENSUAMG00000022911	TRMT1	99	79.503	Ursus_americanus
ENSPCAG00000003698	TRMT1	96	79.683	ENSUMAG00000006027	TRMT1	99	79.683	Ursus_maritimus
ENSPCAG00000003698	TRMT1	99	80.371	ENSVVUG00000024177	TRMT1	98	80.371	Vulpes_vulpes
ENSPCAG00000003698	TRMT1	73	62.422	ENSXETG00000033863	TRMT1	95	62.422	Xenopus_tropicalis
ENSPCAG00000003698	TRMT1	87	64.098	ENSXCOG00000015733	trmt1	88	64.098	Xiphophorus_couchianus
ENSPCAG00000003698	TRMT1	88	63.937	ENSXMAG00000013823	trmt1	98	63.937	Xiphophorus_maculatus