EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000004187 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 13455 bases
Position: chrGeneScaffold_5988:3935-17389
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000003902	SMN	PF06003.12	3.3e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000004158	-	807	-	ENSPCAP00000003902	268 (aa)	-	UPI00018AD89C

Gene Model

Click here to download ENSPCAG00000004187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000004187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000004187	-	99	81.111	ENSG00000205571	SMN2	87	92.500	Homo_sapiens
ENSPCAG00000004187	-	99	81.111	ENSG00000172062	SMN1	90	81.481	Homo_sapiens
ENSPCAG00000004187	-	97	50.549	ENSAPOG00000011324	smn1	91	51.321	Acanthochromis_polyacanthus
ENSPCAG00000004187	-	100	83.704	ENSAMEG00000003316	-	88	84.444	Ailuropoda_melanoleuca
ENSPCAG00000004187	-	94	47.710	ENSACIG00000019772	-	94	47.244	Amphilophus_citrinellus
ENSPCAG00000004187	-	97	50.725	ENSAOCG00000024444	smn1	91	51.825	Amphiprion_ocellaris
ENSPCAG00000004187	-	98	51.460	ENSAPEG00000016504	smn1	93	51.825	Amphiprion_percula
ENSPCAG00000004187	-	96	51.351	ENSATEG00000002182	smn1	78	50.579	Anabas_testudineus
ENSPCAG00000004187	-	75	59.113	ENSAPLG00000010912	-	97	56.931	Anas_platyrhynchos
ENSPCAG00000004187	-	99	58.303	ENSACAG00000010017	-	92	57.934	Anolis_carolinensis
ENSPCAG00000004187	-	99	76.838	ENSANAG00000032133	-	90	78.022	Aotus_nancymaae
ENSPCAG00000004187	-	100	50.000	ENSACLG00000007308	smn1	90	51.493	Astatotilapia_calliptera
ENSPCAG00000004187	-	97	50.000	ENSAMXG00000013884	smn1	91	51.292	Astyanax_mexicanus
ENSPCAG00000004187	-	100	76.384	ENSBTAG00000005743	SMN2	92	75.277	Bos_taurus
ENSPCAG00000004187	-	99	78.967	ENSCJAG00000016290	-	87	84.375	Callithrix_jacchus
ENSPCAG00000004187	-	100	84.444	ENSCAFG00000007812	SMN	92	84.444	Canis_familiaris
ENSPCAG00000004187	-	99	84.387	ENSCAFG00020019229	-	85	84.387	Canis_lupus_dingo
ENSPCAG00000004187	-	100	76.557	ENSCHIG00000015559	-	90	75.458	Capra_hircus
ENSPCAG00000004187	-	99	82.463	ENSTSYG00000012058	-	89	89.062	Carlito_syrichta
ENSPCAG00000004187	-	84	64.629	ENSCAPG00000011021	-	100	64.192	Cavia_aperea
ENSPCAG00000004187	-	100	74.909	ENSCPOG00000012328	-	92	74.545	Cavia_porcellus
ENSPCAG00000004187	-	100	75.185	ENSCPOG00000036973	-	91	74.815	Cavia_porcellus
ENSPCAG00000004187	-	99	79.182	ENSCCAG00000018127	-	87	84.375	Cebus_capucinus
ENSPCAG00000004187	-	99	81.481	ENSCATG00000037002	-	87	84.375	Cercocebus_atys
ENSPCAG00000004187	-	100	75.458	ENSCLAG00000000284	-	91	75.824	Chinchilla_lanigera
ENSPCAG00000004187	-	99	81.111	ENSCSAG00000015688	-	90	81.481	Chlorocebus_sabaeus
ENSPCAG00000004187	-	75	93.333	ENSCHOG00000007346	-	100	72.374	Choloepus_hoffmanni
ENSPCAG00000004187	-	99	63.235	ENSCPBG00000010968	-	99	64.338	Chrysemys_picta_bellii
ENSPCAG00000004187	-	99	82.463	ENSCANG00000038242	-	87	85.938	Colobus_angolensis_palliatus
ENSPCAG00000004187	-	95	77.907	ENSCANG00000033324	-	86	77.519	Colobus_angolensis_palliatus
ENSPCAG00000004187	-	100	78.309	ENSCGRG00001017959	-	92	78.967	Cricetulus_griseus_chok1gshd
ENSPCAG00000004187	-	84	67.257	ENSCGRG00001016998	-	87	69.027	Cricetulus_griseus_chok1gshd
ENSPCAG00000004187	-	100	78.309	ENSCGRG00000007698	Smn1	92	78.967	Cricetulus_griseus_crigri
ENSPCAG00000004187	-	97	46.715	ENSCSEG00000015227	smn1	93	48.175	Cynoglossus_semilaevis
ENSPCAG00000004187	-	97	50.368	ENSCVAG00000007498	smn1	91	48.352	Cyprinodon_variegatus
ENSPCAG00000004187	-	99	52.416	ENSDARG00000018494	smn1	92	52.347	Danio_rerio
ENSPCAG00000004187	-	91	79.184	ENSDNOG00000007283	-	100	80.000	Dasypus_novemcinctus
ENSPCAG00000004187	-	73	69.231	ENSDNOG00000045949	-	85	68.116	Dasypus_novemcinctus
ENSPCAG00000004187	-	91	75.709	ENSDORG00000007082	Smn1	90	76.923	Dipodomys_ordii
ENSPCAG00000004187	-	70	70.213	ENSETEG00000001406	-	89	70.213	Echinops_telfairi
ENSPCAG00000004187	-	95	75.290	ENSEASG00005018000	-	89	75.676	Equus_asinus_asinus
ENSPCAG00000004187	-	100	79.412	ENSECAG00000015215	-	92	79.779	Equus_caballus
ENSPCAG00000004187	-	94	76.562	ENSEEUG00000015777	-	100	74.902	Erinaceus_europaeus
ENSPCAG00000004187	-	97	52.399	ENSELUG00000018067	smn1	91	52.222	Esox_lucius
ENSPCAG00000004187	-	100	81.550	ENSFCAG00000028292	SMN	92	82.657	Felis_catus
ENSPCAG00000004187	-	98	60.606	ENSFALG00000012320	-	91	60.606	Ficedula_albicollis
ENSPCAG00000004187	-	100	75.547	ENSFDAG00000017683	-	91	75.912	Fukomys_damarensis
ENSPCAG00000004187	-	65	49.730	ENSFHEG00000018508	smn1	96	48.339	Fundulus_heteroclitus
ENSPCAG00000004187	-	97	49.438	ENSGMOG00000017279	smn1	88	48.315	Gadus_morhua
ENSPCAG00000004187	-	98	59.848	ENSGALG00000002430	SMN	96	57.915	Gallus_gallus
ENSPCAG00000004187	-	97	50.370	ENSGAFG00000009501	smn1	91	50.562	Gambusia_affinis
ENSPCAG00000004187	-	97	51.908	ENSGACG00000010584	smn1	88	49.057	Gasterosteus_aculeatus
ENSPCAG00000004187	-	99	62.500	ENSGAGG00000011374	-	93	63.235	Gopherus_agassizii
ENSPCAG00000004187	-	95	39.823	ENSGAGG00000013639	-	85	39.823	Gopherus_agassizii
ENSPCAG00000004187	-	64	81.395	ENSGGOG00000026704	-	87	79.581	Gorilla_gorilla
ENSPCAG00000004187	-	94	71.146	ENSGGOG00000003872	-	89	71.937	Gorilla_gorilla
ENSPCAG00000004187	-	98	51.527	ENSHBUG00000013987	smn1	91	53.257	Haplochromis_burtoni
ENSPCAG00000004187	-	100	74.088	ENSHGLG00000001018	-	91	74.453	Heterocephalus_glaber_female
ENSPCAG00000004187	-	100	75.093	ENSHGLG00000001905	-	93	75.093	Heterocephalus_glaber_female
ENSPCAG00000004187	-	96	74.708	ENSHGLG00100018676	-	92	74.708	Heterocephalus_glaber_male
ENSPCAG00000004187	-	100	74.088	ENSHGLG00100011252	-	91	74.453	Heterocephalus_glaber_male
ENSPCAG00000004187	-	94	44.195	ENSHCOG00000017136	smn1	84	47.674	Hippocampus_comes
ENSPCAG00000004187	-	99	50.355	ENSIPUG00000012580	smn1	83	51.246	Ictalurus_punctatus
ENSPCAG00000004187	-	94	81.569	ENSSTOG00000012288	-	90	81.569	Ictidomys_tridecemlineatus
ENSPCAG00000004187	-	64	60.819	ENSJJAG00000014853	-	95	61.170	Jaculus_jaculus
ENSPCAG00000004187	-	98	51.095	ENSKMAG00000007239	smn1	96	52.045	Kryptolebias_marmoratus
ENSPCAG00000004187	-	98	50.730	ENSLBEG00000022550	smn1	94	52.256	Labrus_bergylta
ENSPCAG00000004187	-	96	36.957	ENSLACG00000009808	-	85	39.927	Latimeria_chalumnae
ENSPCAG00000004187	-	97	50.562	ENSLOCG00000011339	smn1	91	51.838	Lepisosteus_oculatus
ENSPCAG00000004187	-	100	86.989	ENSLAFG00000003425	-	88	87.361	Loxodonta_africana
ENSPCAG00000004187	-	99	78.148	ENSMFAG00000008812	-	90	77.778	Macaca_fascicularis
ENSPCAG00000004187	-	99	81.852	ENSMFAG00000031523	SMN1	96	81.481	Macaca_fascicularis
ENSPCAG00000004187	-	99	77.778	ENSMMUG00000030594	-	90	77.407	Macaca_mulatta
ENSPCAG00000004187	-	99	81.111	ENSMMUG00000020214	SMN1	87	85.938	Macaca_mulatta
ENSPCAG00000004187	-	83	69.912	ENSMNEG00000036423	-	80	70.142	Macaca_nemestrina
ENSPCAG00000004187	-	99	80.741	ENSMNEG00000035094	-	87	85.938	Macaca_nemestrina
ENSPCAG00000004187	-	99	81.481	ENSMLEG00000041902	-	87	85.938	Mandrillus_leucophaeus
ENSPCAG00000004187	-	97	48.929	ENSMAMG00000011034	smn1	91	51.493	Mastacembelus_armatus
ENSPCAG00000004187	-	97	51.341	ENSMZEG00005013634	smn1	91	52.874	Maylandia_zebra
ENSPCAG00000004187	-	75	57.000	ENSMGAG00000008889	-	95	55.500	Meleagris_gallopavo
ENSPCAG00000004187	-	100	76.384	ENSMAUG00000010262	Smn1	92	77.491	Mesocricetus_auratus
ENSPCAG00000004187	-	100	66.667	ENSMICG00000034708	-	86	85.938	Microcebus_murinus
ENSPCAG00000004187	-	100	76.103	ENSMOCG00000017833	Smn1	92	76.753	Microtus_ochrogaster
ENSPCAG00000004187	-	97	44.569	ENSMMOG00000005504	smn1	91	45.385	Mola_mola
ENSPCAG00000004187	-	100	70.149	ENSMODG00000001436	-	91	69.403	Monodelphis_domestica
ENSPCAG00000004187	-	97	49.635	ENSMALG00000008025	smn1	91	50.746	Monopterus_albus
ENSPCAG00000004187	-	100	76.838	MGP_CAROLIEiJ_G0018836	Smn1	92	78.309	Mus_caroli
ENSPCAG00000004187	-	100	77.574	ENSMUSG00000021645	Smn1	92	78.309	Mus_musculus
ENSPCAG00000004187	-	100	76.667	MGP_PahariEiJ_G0015911	Smn1	92	76.667	Mus_pahari
ENSPCAG00000004187	-	100	76.838	MGP_SPRETEiJ_G0019718	Smn1	92	77.574	Mus_spretus
ENSPCAG00000004187	-	96	84.170	ENSMPUG00000014470	-	90	84.942	Mustela_putorius_furo
ENSPCAG00000004187	-	100	79.137	ENSMLUG00000010603	-	88	79.137	Myotis_lucifugus
ENSPCAG00000004187	-	100	78.598	ENSNGAG00000019833	Smn1	92	78.598	Nannospalax_galili
ENSPCAG00000004187	-	97	51.136	ENSNBRG00000023000	smn1	91	52.652	Neolamprologus_brichardi
ENSPCAG00000004187	-	99	80.741	ENSNLEG00000004454	-	90	81.111	Nomascus_leucogenys
ENSPCAG00000004187	-	85	66.228	ENSMEUG00000011393	-	99	65.351	Notamacropus_eugenii
ENSPCAG00000004187	-	94	78.988	ENSOPRG00000002015	-	100	79.377	Ochotona_princeps
ENSPCAG00000004187	-	94	75.000	ENSODEG00000015976	-	88	76.172	Octodon_degus
ENSPCAG00000004187	-	97	50.758	ENSONIG00000011799	smn1	91	52.652	Oreochromis_niloticus
ENSPCAG00000004187	-	99	62.963	ENSOANG00000001626	-	93	63.704	Ornithorhynchus_anatinus
ENSPCAG00000004187	-	91	76.190	ENSOCUG00000025183	-	91	77.381	Oryctolagus_cuniculus
ENSPCAG00000004187	-	99	76.471	ENSOCUG00000026649	-	91	77.206	Oryctolagus_cuniculus
ENSPCAG00000004187	-	100	79.851	ENSOCUG00000017097	-	90	80.224	Oryctolagus_cuniculus
ENSPCAG00000004187	-	56	57.616	ENSORLG00000010552	smn1	91	51.119	Oryzias_latipes
ENSPCAG00000004187	-	97	50.951	ENSORLG00020007936	smn1	90	48.659	Oryzias_latipes_hni
ENSPCAG00000004187	-	56	57.616	ENSORLG00015022425	smn1	91	51.493	Oryzias_latipes_hsok
ENSPCAG00000004187	-	54	57.534	ENSOMEG00000007824	smn1	91	51.119	Oryzias_melastigma
ENSPCAG00000004187	-	94	69.349	ENSOGAG00000031414	-	89	69.349	Otolemur_garnettii
ENSPCAG00000004187	-	100	77.122	ENSOARG00000005425	-	97	76.384	Ovis_aries
ENSPCAG00000004187	-	99	80.741	ENSPPAG00000036640	-	90	81.111	Pan_paniscus
ENSPCAG00000004187	-	100	81.919	ENSPPRG00000005575	-	92	83.026	Panthera_pardus
ENSPCAG00000004187	-	100	81.618	ENSPTIG00000007745	-	92	82.353	Panthera_tigris_altaica
ENSPCAG00000004187	-	99	79.853	ENSPTRG00000016955	-	90	80.220	Pan_troglodytes
ENSPCAG00000004187	-	98	77.903	ENSPANG00000000253	-	88	77.528	Papio_anubis
ENSPCAG00000004187	-	99	81.111	ENSPANG00000013601	-	87	85.938	Papio_anubis
ENSPCAG00000004187	-	97	46.947	ENSPKIG00000011096	smn1	94	47.292	Paramormyrops_kingsleyae
ENSPCAG00000004187	-	99	61.029	ENSPSIG00000014787	-	85	61.029	Pelodiscus_sinensis
ENSPCAG00000004187	-	98	46.494	ENSPMGG00000012285	smn1	91	47.778	Periophthalmus_magnuspinnatus
ENSPCAG00000004187	-	97	40.755	ENSPMAG00000005004	smn1	89	40.000	Petromyzon_marinus
ENSPCAG00000004187	-	100	70.149	ENSPCIG00000025764	-	92	69.403	Phascolarctos_cinereus
ENSPCAG00000004187	-	97	50.370	ENSPFOG00000007786	smn1	91	50.746	Poecilia_formosa
ENSPCAG00000004187	-	97	50.741	ENSPLAG00000012071	smn1	91	51.119	Poecilia_latipinna
ENSPCAG00000004187	-	97	50.370	ENSPMEG00000017085	smn1	91	50.746	Poecilia_mexicana
ENSPCAG00000004187	-	97	50.741	ENSPREG00000005824	smn1	91	48.699	Poecilia_reticulata
ENSPCAG00000004187	-	94	53.968	ENSPPYG00000019189	-	88	76.923	Pongo_abelii
ENSPCAG00000004187	-	99	81.481	ENSPPYG00000015533	-	96	81.111	Pongo_abelii
ENSPCAG00000004187	-	98	62.738	ENSPCOG00000022307	-	100	63.498	Propithecus_coquereli
ENSPCAG00000004187	-	100	83.333	ENSPVAG00000005977	-	91	84.074	Pteropus_vampyrus
ENSPCAG00000004187	-	97	51.136	ENSPNYG00000014148	smn1	91	52.652	Pundamilia_nyererei
ENSPCAG00000004187	-	98	47.584	ENSPNAG00000014007	smn1	80	49.815	Pygocentrus_nattereri
ENSPCAG00000004187	-	100	75.092	ENSRNOG00000018067	Smn1	92	75.735	Rattus_norvegicus
ENSPCAG00000004187	-	95	71.260	ENSRBIG00000036775	-	85	71.654	Rhinopithecus_bieti
ENSPCAG00000004187	-	99	82.593	ENSRBIG00000037052	-	87	85.938	Rhinopithecus_bieti
ENSPCAG00000004187	-	99	82.593	ENSRROG00000039399	-	87	85.938	Rhinopithecus_roxellana
ENSPCAG00000004187	-	99	68.302	ENSRROG00000031088	-	89	68.302	Rhinopithecus_roxellana
ENSPCAG00000004187	-	99	78.652	ENSSBOG00000011665	-	90	79.851	Saimiri_boliviensis_boliviensis
ENSPCAG00000004187	-	91	73.047	ENSSBOG00000020112	-	87	72.549	Saimiri_boliviensis_boliviensis
ENSPCAG00000004187	-	100	69.776	ENSSHAG00000001499	-	97	69.030	Sarcophilus_harrisii
ENSPCAG00000004187	-	98	50.382	ENSSFOG00015015507	smn1	91	52.015	Scleropages_formosus
ENSPCAG00000004187	-	98	47.761	ENSSMAG00000007922	smn1	91	48.905	Scophthalmus_maximus
ENSPCAG00000004187	-	98	48.889	ENSSDUG00000018533	smn1	91	50.190	Seriola_dumerili
ENSPCAG00000004187	-	98	47.826	ENSSLDG00000021135	smn1	91	50.570	Seriola_lalandi_dorsalis
ENSPCAG00000004187	-	97	65.530	ENSSPUG00000000373	-	90	65.909	Sphenodon_punctatus
ENSPCAG00000004187	-	98	48.175	ENSSPAG00000004345	smn1	91	51.136	Stegastes_partitus
ENSPCAG00000004187	-	100	58.955	ENSSSCG00000029127	-	88	60.075	Sus_scrofa
ENSPCAG00000004187	-	100	80.443	ENSSSCG00000016970	-	91	81.919	Sus_scrofa
ENSPCAG00000004187	-	81	55.093	ENSSSCG00000033865	-	93	55.189	Sus_scrofa
ENSPCAG00000004187	-	94	59.846	ENSTGUG00000001548	-	92	59.073	Taeniopygia_guttata
ENSPCAG00000004187	-	97	44.569	ENSTRUG00000000736	smn	91	45.149	Takifugu_rubripes
ENSPCAG00000004187	-	98	45.000	ENSTNIG00000009892	smn1	91	48.014	Tetraodon_nigroviridis
ENSPCAG00000004187	-	64	83.140	ENSTBEG00000002399	-	88	81.915	Tupaia_belangeri
ENSPCAG00000004187	-	100	81.343	ENSTTRG00000005080	-	90	81.716	Tursiops_truncatus
ENSPCAG00000004187	-	64	86.628	ENSUAMG00000024947	-	67	85.106	Ursus_americanus
ENSPCAG00000004187	-	100	84.444	ENSUMAG00000007842	-	68	85.185	Ursus_maritimus
ENSPCAG00000004187	-	94	69.804	ENSVPAG00000009887	-	90	70.196	Vicugna_pacos
ENSPCAG00000004187	-	100	84.444	ENSVVUG00000006934	-	92	84.444	Vulpes_vulpes
ENSPCAG00000004187	-	97	53.585	ENSXETG00000018189	smn2	90	53.285	Xenopus_tropicalis
ENSPCAG00000004187	-	99	36.842	ENSXETG00000004912	-	75	55.738	Xenopus_tropicalis
ENSPCAG00000004187	-	97	51.111	ENSXMAG00000001521	smn1	91	51.866	Xiphophorus_maculatus