EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000004350 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 19946 bases
Position: chrGeneScaffold_5807:11765-31710
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004225	ResIII	PF04851.15	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000004505	CHD3-201	5892	-	ENSPCAP00000004225	1963 (aa)	-	UPI00018AEC8C

Gene Model

Click here to download ENSPCAG00000004350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000004350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000004350	CHD3	50	80.124	ENSPCAG00000007120	-	84	80.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000004350	CHD3	96	97.761	ENSG00000170004	CHD3	95	97.761	Homo_sapiens
ENSPCAG00000004350	CHD3	77	87.350	ENSAPOG00000005614	chd3	90	87.350	Acanthochromis_polyacanthus
ENSPCAG00000004350	CHD3	69	96.552	ENSAMEG00000003025	-	99	96.552	Ailuropoda_melanoleuca
ENSPCAG00000004350	CHD3	76	88.372	ENSACIG00000019671	chd3	93	88.372	Amphilophus_citrinellus
ENSPCAG00000004350	CHD3	77	87.241	ENSAOCG00000023784	chd3	92	87.241	Amphiprion_ocellaris
ENSPCAG00000004350	CHD3	72	86.019	ENSAPEG00000006341	chd3	93	77.179	Amphiprion_percula
ENSPCAG00000004350	CHD3	94	76.554	ENSATEG00000000848	chd3	90	82.105	Anabas_testudineus
ENSPCAG00000004350	CHD3	95	86.919	ENSACAG00000004276	CHD3	92	86.919	Anolis_carolinensis
ENSPCAG00000004350	CHD3	96	95.151	ENSANAG00000034323	CHD3	96	97.750	Aotus_nancymaae
ENSPCAG00000004350	CHD3	88	84.000	ENSACLG00000009222	chd3	87	87.086	Astatotilapia_calliptera
ENSPCAG00000004350	CHD3	96	97.871	ENSBTAG00000014377	CHD3	94	98.035	Bos_taurus
ENSPCAG00000004350	CHD3	96	97.761	ENSCJAG00000014766	CHD3	95	97.761	Callithrix_jacchus
ENSPCAG00000004350	CHD3	96	97.722	ENSCAFG00000016859	CHD3	95	97.722	Canis_familiaris
ENSPCAG00000004350	CHD3	92	97.722	ENSCAFG00020007422	CHD3	96	97.722	Canis_lupus_dingo
ENSPCAG00000004350	CHD3	96	98.016	ENSCHIG00000016737	CHD3	96	98.016	Capra_hircus
ENSPCAG00000004350	CHD3	96	97.502	ENSTSYG00000035658	CHD3	96	98.000	Carlito_syrichta
ENSPCAG00000004350	CHD3	96	95.709	ENSCAPG00000014864	CHD3	94	95.896	Cavia_aperea
ENSPCAG00000004350	CHD3	96	97.061	ENSCPOG00000022653	CHD3	95	97.061	Cavia_porcellus
ENSPCAG00000004350	CHD3	96	97.761	ENSCCAG00000034792	CHD3	95	97.761	Cebus_capucinus
ENSPCAG00000004350	CHD3	96	97.649	ENSCATG00000041717	CHD3	95	97.649	Cercocebus_atys
ENSPCAG00000004350	CHD3	96	97.355	ENSCLAG00000010523	CHD3	96	97.355	Chinchilla_lanigera
ENSPCAG00000004350	CHD3	96	97.649	ENSCSAG00000011122	CHD3	96	97.649	Chlorocebus_sabaeus
ENSPCAG00000004350	CHD3	87	84.339	ENSCPBG00000011966	CHD3	88	95.817	Chrysemys_picta_bellii
ENSPCAG00000004350	CHD3	96	97.575	ENSCANG00000037641	CHD3	96	97.750	Colobus_angolensis_palliatus
ENSPCAG00000004350	CHD3	96	96.767	ENSCGRG00001011306	Chd3	96	96.767	Cricetulus_griseus_chok1gshd
ENSPCAG00000004350	CHD3	91	96.324	ENSCGRG00000007878	Chd3	95	96.324	Cricetulus_griseus_crigri
ENSPCAG00000004350	CHD3	87	81.750	ENSCSEG00000004489	chd3	96	82.391	Cynoglossus_semilaevis
ENSPCAG00000004350	CHD3	84	84.787	ENSCVAG00000007293	chd3	91	84.787	Cyprinodon_variegatus
ENSPCAG00000004350	CHD3	85	85.547	ENSDARG00000021405	chd3	96	78.556	Danio_rerio
ENSPCAG00000004350	CHD3	94	88.847	ENSDNOG00000047846	CHD3	90	92.197	Dasypus_novemcinctus
ENSPCAG00000004350	CHD3	96	96.828	ENSDORG00000010713	Chd3	96	96.828	Dipodomys_ordii
ENSPCAG00000004350	CHD3	94	94.398	ENSETEG00000017733	CHD3	96	94.398	Echinops_telfairi
ENSPCAG00000004350	CHD3	90	98.010	ENSEASG00005019360	CHD3	96	98.010	Equus_asinus_asinus
ENSPCAG00000004350	CHD3	90	98.010	ENSECAG00000010051	CHD3	96	98.010	Equus_caballus
ENSPCAG00000004350	CHD3	89	91.525	ENSEEUG00000015205	CHD3	89	92.308	Erinaceus_europaeus
ENSPCAG00000004350	CHD3	75	90.476	ENSELUG00000019499	chd3	95	90.476	Esox_lucius
ENSPCAG00000004350	CHD3	96	97.355	ENSFCAG00000009629	CHD3	92	97.355	Felis_catus
ENSPCAG00000004350	CHD3	96	97.502	ENSFDAG00000008220	CHD3	95	97.502	Fukomys_damarensis
ENSPCAG00000004350	CHD3	86	81.338	ENSGMOG00000013599	chd3	88	81.769	Gadus_morhua
ENSPCAG00000004350	CHD3	56	85.265	ENSGAFG00000004055	chd3	92	85.430	Gambusia_affinis
ENSPCAG00000004350	CHD3	95	77.124	ENSGACG00000019275	chd3	96	77.342	Gasterosteus_aculeatus
ENSPCAG00000004350	CHD3	64	94.767	ENSGAGG00000013164	CHD3	89	94.767	Gopherus_agassizii
ENSPCAG00000004350	CHD3	96	97.722	ENSGGOG00000013496	CHD3	96	97.500	Gorilla_gorilla
ENSPCAG00000004350	CHD3	96	97.575	ENSHGLG00000012017	CHD3	95	97.575	Heterocephalus_glaber_female
ENSPCAG00000004350	CHD3	86	92.844	ENSHGLG00100013902	CHD3	95	92.844	Heterocephalus_glaber_male
ENSPCAG00000004350	CHD3	91	77.554	ENSHCOG00000010170	chd3	92	77.504	Hippocampus_comes
ENSPCAG00000004350	CHD3	81	88.159	ENSIPUG00000003271	chd3	92	74.962	Ictalurus_punctatus
ENSPCAG00000004350	CHD3	96	97.575	ENSSTOG00000025907	CHD3	96	97.575	Ictidomys_tridecemlineatus
ENSPCAG00000004350	CHD3	96	96.841	ENSJJAG00000017633	Chd3	96	96.841	Jaculus_jaculus
ENSPCAG00000004350	CHD3	84	86.486	ENSKMAG00000019292	chd3	93	76.816	Kryptolebias_marmoratus
ENSPCAG00000004350	CHD3	93	72.090	ENSLBEG00000028485	chd3	87	74.034	Labrus_bergylta
ENSPCAG00000004350	CHD3	93	75.304	ENSLACG00000008031	CHD3	94	74.965	Latimeria_chalumnae
ENSPCAG00000004350	CHD3	95	79.576	ENSLOCG00000013965	chd3	93	79.844	Lepisosteus_oculatus
ENSPCAG00000004350	CHD3	92	98.202	ENSLAFG00000000572	CHD3	96	98.202	Loxodonta_africana
ENSPCAG00000004350	CHD3	96	97.649	ENSMFAG00000020113	CHD3	96	97.500	Macaca_fascicularis
ENSPCAG00000004350	CHD3	96	97.388	ENSMMUG00000022221	CHD3	95	97.388	Macaca_mulatta
ENSPCAG00000004350	CHD3	96	97.575	ENSMNEG00000001728	CHD3	96	97.750	Macaca_nemestrina
ENSPCAG00000004350	CHD3	96	97.649	ENSMLEG00000032249	CHD3	95	97.649	Mandrillus_leucophaeus
ENSPCAG00000004350	CHD3	83	78.479	ENSMAMG00000000564	chd3	95	77.823	Mastacembelus_armatus
ENSPCAG00000004350	CHD3	96	96.694	ENSMAUG00000013873	Chd3	93	96.694	Mesocricetus_auratus
ENSPCAG00000004350	CHD3	96	97.575	ENSMICG00000008741	CHD3	95	97.504	Microcebus_murinus
ENSPCAG00000004350	CHD3	96	96.841	ENSMOCG00000004848	Chd3	96	96.841	Microtus_ochrogaster
ENSPCAG00000004350	CHD3	92	78.625	ENSMMOG00000012699	chd3	96	78.900	Mola_mola
ENSPCAG00000004350	CHD3	90	92.291	ENSMODG00000007509	CHD3	96	92.291	Monodelphis_domestica
ENSPCAG00000004350	CHD3	96	96.332	MGP_CAROLIEiJ_G0016564	Chd3	96	95.841	Mus_caroli
ENSPCAG00000004350	CHD3	96	96.552	ENSMUSG00000018474	Chd3	96	95.463	Mus_musculus
ENSPCAG00000004350	CHD3	96	96.698	MGP_PahariEiJ_G0017695	Chd3	96	95.644	Mus_pahari
ENSPCAG00000004350	CHD3	96	96.478	MGP_SPRETEiJ_G0017400	Chd3	96	95.652	Mus_spretus
ENSPCAG00000004350	CHD3	83	97.651	ENSMPUG00000008861	CHD3	96	97.651	Mustela_putorius_furo
ENSPCAG00000004350	CHD3	96	97.137	ENSMLUG00000014643	-	95	97.137	Myotis_lucifugus
ENSPCAG00000004350	CHD3	96	97.061	ENSNGAG00000000773	Chd3	94	97.061	Nannospalax_galili
ENSPCAG00000004350	CHD3	83	79.673	ENSNBRG00000000636	chd3	92	79.837	Neolamprologus_brichardi
ENSPCAG00000004350	CHD3	96	97.201	ENSNLEG00000009770	CHD3	96	97.761	Nomascus_leucogenys
ENSPCAG00000004350	CHD3	82	92.786	ENSMEUG00000005852	CHD3	84	93.387	Notamacropus_eugenii
ENSPCAG00000004350	CHD3	92	96.833	ENSOPRG00000011069	CHD3	96	97.059	Ochotona_princeps
ENSPCAG00000004350	CHD3	96	97.208	ENSODEG00000017785	CHD3	95	97.208	Octodon_degus
ENSPCAG00000004350	CHD3	93	78.779	ENSONIG00000009292	chd3	96	79.416	Oreochromis_niloticus
ENSPCAG00000004350	CHD3	96	92.392	ENSOCUG00000029299	CHD3	96	92.763	Oryctolagus_cuniculus
ENSPCAG00000004350	CHD3	79	74.771	ENSORLG00000007107	chd3	82	83.766	Oryzias_latipes
ENSPCAG00000004350	CHD3	54	87.478	ENSORLG00020008387	chd3	88	87.478	Oryzias_latipes_hni
ENSPCAG00000004350	CHD3	67	87.121	ENSOMEG00000013691	chd3	94	80.146	Oryzias_melastigma
ENSPCAG00000004350	CHD3	96	97.502	ENSOGAG00000003216	CHD3	96	97.502	Otolemur_garnettii
ENSPCAG00000004350	CHD3	96	97.141	ENSOARG00000017855	CHD3	95	97.141	Ovis_aries
ENSPCAG00000004350	CHD3	96	96.269	ENSPPAG00000032886	CHD3	96	96.000	Pan_paniscus
ENSPCAG00000004350	CHD3	96	97.649	ENSPPRG00000000626	CHD3	95	97.649	Panthera_pardus
ENSPCAG00000004350	CHD3	96	97.796	ENSPTRG00000008714	CHD3	96	98.000	Pan_troglodytes
ENSPCAG00000004350	CHD3	96	97.649	ENSPANG00000023938	CHD3	96	97.750	Papio_anubis
ENSPCAG00000004350	CHD3	95	78.190	ENSPKIG00000006305	chd3	95	78.786	Paramormyrops_kingsleyae
ENSPCAG00000004350	CHD3	51	96.533	ENSPSIG00000010177	CHD3	92	96.533	Pelodiscus_sinensis
ENSPCAG00000004350	CHD3	96	96.253	ENSPEMG00000014262	Chd3	96	96.253	Peromyscus_maniculatus_bairdii
ENSPCAG00000004350	CHD3	96	92.438	ENSPCIG00000005442	CHD3	93	97.933	Phascolarctos_cinereus
ENSPCAG00000004350	CHD3	93	76.638	ENSPFOG00000012464	chd3	89	77.263	Poecilia_formosa
ENSPCAG00000004350	CHD3	84	83.401	ENSPLAG00000002887	chd3	88	84.670	Poecilia_latipinna
ENSPCAG00000004350	CHD3	50	85.996	ENSPMEG00000016725	chd3	87	85.996	Poecilia_mexicana
ENSPCAG00000004350	CHD3	87	86.797	ENSPREG00000011044	chd3	95	85.474	Poecilia_reticulata
ENSPCAG00000004350	CHD3	94	96.192	ENSPPYG00000007940	CHD3	96	96.393	Pongo_abelii
ENSPCAG00000004350	CHD3	96	97.649	ENSPCOG00000020952	CHD3	95	97.577	Propithecus_coquereli
ENSPCAG00000004350	CHD3	83	99.775	ENSPVAG00000016344	CHD3	83	99.775	Pteropus_vampyrus
ENSPCAG00000004350	CHD3	86	85.820	ENSPNAG00000020393	chd3	96	85.820	Pygocentrus_nattereri
ENSPCAG00000004350	CHD3	90	96.478	ENSRNOG00000009722	Chd3	96	96.478	Rattus_norvegicus
ENSPCAG00000004350	CHD3	96	95.303	ENSRBIG00000033562	CHD3	96	95.303	Rhinopithecus_bieti
ENSPCAG00000004350	CHD3	96	97.575	ENSRROG00000029554	CHD3	96	97.750	Rhinopithecus_roxellana
ENSPCAG00000004350	CHD3	96	97.761	ENSSBOG00000020719	CHD3	96	98.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000004350	CHD3	96	92.424	ENSSHAG00000014412	CHD3	96	92.614	Sarcophilus_harrisii
ENSPCAG00000004350	CHD3	84	79.669	ENSSFOG00015023123	chd3	91	79.458	Scleropages_formosus
ENSPCAG00000004350	CHD3	77	91.358	ENSSMAG00000006451	chd3	96	76.671	Scophthalmus_maximus
ENSPCAG00000004350	CHD3	52	86.148	ENSSDUG00000005792	chd3	88	86.148	Seriola_dumerili
ENSPCAG00000004350	CHD3	76	87.209	ENSSPAG00000013694	chd3	94	84.951	Stegastes_partitus
ENSPCAG00000004350	CHD3	96	97.357	ENSSSCG00000021363	CHD3	96	97.357	Sus_scrofa
ENSPCAG00000004350	CHD3	72	84.375	ENSTRUG00000014990	chd3	85	84.375	Takifugu_rubripes
ENSPCAG00000004350	CHD3	94	77.496	ENSTNIG00000012998	chd3	95	77.408	Tetraodon_nigroviridis
ENSPCAG00000004350	CHD3	60	97.619	ENSTBEG00000011454	-	67	97.619	Tupaia_belangeri
ENSPCAG00000004350	CHD3	95	98.630	ENSTTRG00000010295	CHD3	93	98.630	Tursiops_truncatus
ENSPCAG00000004350	CHD3	90	96.481	ENSUAMG00000005475	CHD3	96	96.481	Ursus_americanus
ENSPCAG00000004350	CHD3	52	100.000	ENSVPAG00000010794	-	58	100.000	Vicugna_pacos
ENSPCAG00000004350	CHD3	92	97.891	ENSVVUG00000028011	CHD3	95	97.722	Vulpes_vulpes
ENSPCAG00000004350	CHD3	95	76.132	ENSXETG00000012991	chd3	88	75.971	Xenopus_tropicalis
ENSPCAG00000004350	CHD3	75	86.127	ENSXMAG00000016035	chd3	94	86.369	Xiphophorus_maculatus