EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000004808 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 75759 bases
Position: chrGeneScaffold_437:260-76018
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004622	SpoU_methylase	PF00588.19	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000004933	TARBP1-201	4833	-	ENSPCAP00000004622	1611 (aa)	-	UPI00018AF5F0

Gene Model

Click here to download ENSPCAG00000004808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000004808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000004808	TARBP1	85	93.333	ENSG00000059588	TARBP1	85	93.333	Homo_sapiens
ENSPCAG00000004808	TARBP1	80	77.551	ENSAPOG00000016419	si:dkey-85a20.4	67	77.551	Acanthochromis_polyacanthus
ENSPCAG00000004808	TARBP1	70	86.364	ENSAMEG00000003359	TARBP1	83	86.364	Ailuropoda_melanoleuca
ENSPCAG00000004808	TARBP1	80	77.551	ENSATEG00000020266	si:dkey-85a20.4	80	77.551	Anabas_testudineus
ENSPCAG00000004808	TARBP1	67	85.621	ENSAPLG00000007666	TARBP1	82	85.621	Anas_platyrhynchos
ENSPCAG00000004808	TARBP1	85	72.000	ENSACAG00000001142	TARBP1	84	72.000	Anolis_carolinensis
ENSPCAG00000004808	TARBP1	78	92.667	ENSANAG00000022031	TARBP1	85	92.667	Aotus_nancymaae
ENSPCAG00000004808	TARBP1	85	90.667	ENSBTAG00000004517	TARBP1	90	90.667	Bos_taurus
ENSPCAG00000004808	TARBP1	85	92.000	ENSCJAG00000018155	TARBP1	85	92.000	Callithrix_jacchus
ENSPCAG00000004808	TARBP1	74	86.364	ENSCAFG00000011533	TARBP1	84	86.364	Canis_familiaris
ENSPCAG00000004808	TARBP1	85	86.364	ENSCAFG00020027141	TARBP1	87	86.364	Canis_lupus_dingo
ENSPCAG00000004808	TARBP1	85	90.000	ENSCHIG00000011437	TARBP1	85	90.000	Capra_hircus
ENSPCAG00000004808	TARBP1	66	90.667	ENSTSYG00000010382	TARBP1	79	90.667	Carlito_syrichta
ENSPCAG00000004808	TARBP1	56	87.417	ENSCAPG00000010831	TARBP1	75	87.417	Cavia_aperea
ENSPCAG00000004808	TARBP1	85	87.417	ENSCPOG00000013995	TARBP1	86	87.417	Cavia_porcellus
ENSPCAG00000004808	TARBP1	85	92.000	ENSCCAG00000037278	TARBP1	85	92.000	Cebus_capucinus
ENSPCAG00000004808	TARBP1	85	93.333	ENSCATG00000011754	TARBP1	85	93.333	Cercocebus_atys
ENSPCAG00000004808	TARBP1	66	87.919	ENSCLAG00000003655	TARBP1	79	87.919	Chinchilla_lanigera
ENSPCAG00000004808	TARBP1	65	94.000	ENSCSAG00000010100	TARBP1	81	94.000	Chlorocebus_sabaeus
ENSPCAG00000004808	TARBP1	79	89.091	ENSCPBG00000005587	TARBP1	82	89.091	Chrysemys_picta_bellii
ENSPCAG00000004808	TARBP1	70	92.667	ENSCANG00000034343	TARBP1	83	92.667	Colobus_angolensis_palliatus
ENSPCAG00000004808	TARBP1	85	87.838	ENSCGRG00001016690	Tarbp1	85	87.838	Cricetulus_griseus_chok1gshd
ENSPCAG00000004808	TARBP1	75	87.838	ENSCGRG00000016893	Tarbp1	80	87.838	Cricetulus_griseus_crigri
ENSPCAG00000004808	TARBP1	79	78.231	ENSCSEG00000005255	si:dkey-85a20.4	80	78.231	Cynoglossus_semilaevis
ENSPCAG00000004808	TARBP1	80	73.913	ENSDARG00000079055	si:dkey-85a20.4	68	73.913	Danio_rerio
ENSPCAG00000004808	TARBP1	85	92.982	ENSDNOG00000008637	TARBP1	85	92.982	Dasypus_novemcinctus
ENSPCAG00000004808	TARBP1	69	67.092	ENSDORG00000007984	Tarbp1	86	67.092	Dipodomys_ordii
ENSPCAG00000004808	TARBP1	85	91.558	ENSEASG00005000252	TARBP1	87	91.558	Equus_asinus_asinus
ENSPCAG00000004808	TARBP1	85	91.558	ENSECAG00000023673	TARBP1	87	91.558	Equus_caballus
ENSPCAG00000004808	TARBP1	80	75.362	ENSELUG00000012193	si:dkey-85a20.4	66	75.362	Esox_lucius
ENSPCAG00000004808	TARBP1	85	87.662	ENSFCAG00000014183	TARBP1	86	87.662	Felis_catus
ENSPCAG00000004808	TARBP1	66	88.889	ENSFALG00000013565	TARBP1	82	85.714	Ficedula_albicollis
ENSPCAG00000004808	TARBP1	65	86.577	ENSFDAG00000001308	TARBP1	80	86.577	Fukomys_damarensis
ENSPCAG00000004808	TARBP1	70	73.485	ENSFHEG00000007565	si:dkey-85a20.4	68	73.485	Fundulus_heteroclitus
ENSPCAG00000004808	TARBP1	65	78.082	ENSGMOG00000004549	si:dkey-85a20.4	75	78.082	Gadus_morhua
ENSPCAG00000004808	TARBP1	85	63.258	ENSGALG00000011000	TARBP1	89	63.258	Gallus_gallus
ENSPCAG00000004808	TARBP1	72	76.316	ENSGAFG00000007387	si:dkey-85a20.4	67	76.316	Gambusia_affinis
ENSPCAG00000004808	TARBP1	74	51.550	ENSGACG00000005865	si:dkey-85a20.4	85	51.550	Gasterosteus_aculeatus
ENSPCAG00000004808	TARBP1	85	87.500	ENSGAGG00000012102	TARBP1	86	87.500	Gopherus_agassizii
ENSPCAG00000004808	TARBP1	67	93.333	ENSGGOG00000022879	TARBP1	80	93.333	Gorilla_gorilla
ENSPCAG00000004808	TARBP1	67	78.231	ENSHBUG00000008877	si:dkey-85a20.4	66	78.231	Haplochromis_burtoni
ENSPCAG00000004808	TARBP1	85	86.667	ENSHGLG00000011592	TARBP1	85	86.667	Heterocephalus_glaber_female
ENSPCAG00000004808	TARBP1	84	86.667	ENSHGLG00100015169	TARBP1	84	86.667	Heterocephalus_glaber_male
ENSPCAG00000004808	TARBP1	66	78.195	ENSIPUG00000005249	si:dkey-85a20.4	61	78.195	Ictalurus_punctatus
ENSPCAG00000004808	TARBP1	72	85.235	ENSSTOG00000032291	TARBP1	83	85.235	Ictidomys_tridecemlineatus
ENSPCAG00000004808	TARBP1	75	85.135	ENSJJAG00000017840	Tarbp1	83	85.135	Jaculus_jaculus
ENSPCAG00000004808	TARBP1	53	78.912	ENSKMAG00000017546	si:dkey-85a20.4	52	78.912	Kryptolebias_marmoratus
ENSPCAG00000004808	TARBP1	82	78.146	ENSLACG00000004337	TARBP1	82	78.146	Latimeria_chalumnae
ENSPCAG00000004808	TARBP1	81	80.272	ENSLOCG00000016214	si:dkey-85a20.4	81	80.272	Lepisosteus_oculatus
ENSPCAG00000004808	TARBP1	84	81.493	ENSLAFG00000011394	TARBP1	88	82.618	Loxodonta_africana
ENSPCAG00000004808	TARBP1	85	93.333	ENSMFAG00000041068	TARBP1	85	93.333	Macaca_fascicularis
ENSPCAG00000004808	TARBP1	85	93.333	ENSMMUG00000021703	TARBP1	85	93.333	Macaca_mulatta
ENSPCAG00000004808	TARBP1	85	93.333	ENSMNEG00000045002	TARBP1	85	93.333	Macaca_nemestrina
ENSPCAG00000004808	TARBP1	69	93.333	ENSMLEG00000044182	TARBP1	82	93.333	Mandrillus_leucophaeus
ENSPCAG00000004808	TARBP1	75	79.592	ENSMAMG00000021760	si:dkey-85a20.4	76	79.592	Mastacembelus_armatus
ENSPCAG00000004808	TARBP1	67	77.551	ENSMZEG00005005751	si:dkey-85a20.4	66	77.551	Maylandia_zebra
ENSPCAG00000004808	TARBP1	85	87.838	ENSMAUG00000020968	Tarbp1	85	87.838	Mesocricetus_auratus
ENSPCAG00000004808	TARBP1	81	89.189	ENSMICG00000015280	TARBP1	84	89.189	Microcebus_murinus
ENSPCAG00000004808	TARBP1	85	87.162	ENSMOCG00000004128	Tarbp1	85	87.162	Microtus_ochrogaster
ENSPCAG00000004808	TARBP1	80	76.087	ENSMMOG00000007795	si:dkey-85a20.4	80	76.087	Mola_mola
ENSPCAG00000004808	TARBP1	85	88.000	ENSMODG00000008504	TARBP1	85	88.000	Monodelphis_domestica
ENSPCAG00000004808	TARBP1	67	76.642	ENSMALG00000002916	si:dkey-85a20.4	66	76.642	Monopterus_albus
ENSPCAG00000004808	TARBP1	85	87.162	MGP_CAROLIEiJ_G0031729	Tarbp1	85	87.162	Mus_caroli
ENSPCAG00000004808	TARBP1	85	87.162	ENSMUSG00000090290	Tarbp1	88	64.729	Mus_musculus
ENSPCAG00000004808	TARBP1	88	65.637	MGP_PahariEiJ_G0023326	Tarbp1	85	87.248	Mus_pahari
ENSPCAG00000004808	TARBP1	85	87.838	MGP_SPRETEiJ_G0032846	Tarbp1	85	87.838	Mus_spretus
ENSPCAG00000004808	TARBP1	63	86.364	ENSMPUG00000002802	TARBP1	81	86.364	Mustela_putorius_furo
ENSPCAG00000004808	TARBP1	73	66.021	ENSMLUG00000002414	TARBP1	86	66.667	Myotis_lucifugus
ENSPCAG00000004808	TARBP1	85	93.333	ENSNLEG00000002518	TARBP1	85	93.333	Nomascus_leucogenys
ENSPCAG00000004808	TARBP1	54	87.333	ENSMEUG00000011370	-	54	87.333	Notamacropus_eugenii
ENSPCAG00000004808	TARBP1	60	73.588	ENSOPRG00000013822	TARBP1	59	73.540	Ochotona_princeps
ENSPCAG00000004808	TARBP1	82	87.248	ENSODEG00000005238	TARBP1	82	87.248	Octodon_degus
ENSPCAG00000004808	TARBP1	67	78.231	ENSONIG00000009789	si:dkey-85a20.4	77	78.231	Oreochromis_niloticus
ENSPCAG00000004808	TARBP1	88	76.923	ENSOCUG00000017418	TARBP1	88	75.949	Oryctolagus_cuniculus
ENSPCAG00000004808	TARBP1	80	76.871	ENSORLG00000010529	si:dkey-85a20.4	71	76.871	Oryzias_latipes
ENSPCAG00000004808	TARBP1	84	76.871	ENSORLG00020019264	si:dkey-85a20.4	71	76.871	Oryzias_latipes_hni
ENSPCAG00000004808	TARBP1	80	76.871	ENSORLG00015003276	si:dkey-85a20.4	80	76.871	Oryzias_latipes_hsok
ENSPCAG00000004808	TARBP1	88	73.256	ENSOGAG00000002379	TARBP1	88	72.287	Otolemur_garnettii
ENSPCAG00000004808	TARBP1	77	90.000	ENSOARG00000003434	TARBP1	84	90.000	Ovis_aries
ENSPCAG00000004808	TARBP1	70	94.000	ENSPPAG00000028097	TARBP1	82	94.000	Pan_paniscus
ENSPCAG00000004808	TARBP1	71	87.662	ENSPPRG00000013561	TARBP1	84	87.662	Panthera_pardus
ENSPCAG00000004808	TARBP1	69	87.662	ENSPTIG00000009281	TARBP1	83	87.662	Panthera_tigris_altaica
ENSPCAG00000004808	TARBP1	85	94.000	ENSPTRG00000002124	TARBP1	85	94.000	Pan_troglodytes
ENSPCAG00000004808	TARBP1	85	93.333	ENSPANG00000021933	TARBP1	85	93.333	Papio_anubis
ENSPCAG00000004808	TARBP1	81	75.163	ENSPKIG00000016716	si:dkey-85a20.4	66	75.163	Paramormyrops_kingsleyae
ENSPCAG00000004808	TARBP1	65	87.500	ENSPSIG00000010699	TARBP1	81	87.500	Pelodiscus_sinensis
ENSPCAG00000004808	TARBP1	79	86.577	ENSPEMG00000006888	Tarbp1	83	86.577	Peromyscus_maniculatus_bairdii
ENSPCAG00000004808	TARBP1	82	86.667	ENSPCIG00000029710	TARBP1	89	86.667	Phascolarctos_cinereus
ENSPCAG00000004808	TARBP1	67	73.377	ENSPFOG00000013020	si:dkey-85a20.4	77	73.377	Poecilia_formosa
ENSPCAG00000004808	TARBP1	72	75.658	ENSPLAG00000006044	si:dkey-85a20.4	67	75.658	Poecilia_latipinna
ENSPCAG00000004808	TARBP1	72	75.658	ENSPMEG00000017857	si:dkey-85a20.4	67	75.658	Poecilia_mexicana
ENSPCAG00000004808	TARBP1	75	75.658	ENSPREG00000022753	si:dkey-85a20.4	67	75.658	Poecilia_reticulata
ENSPCAG00000004808	TARBP1	76	92.667	ENSPPYG00000000102	TARBP1	84	92.667	Pongo_abelii
ENSPCAG00000004808	TARBP1	88	74.878	ENSPCOG00000005666	TARBP1	88	74.294	Propithecus_coquereli
ENSPCAG00000004808	TARBP1	85	85.714	ENSPVAG00000014798	TARBP1	85	85.714	Pteropus_vampyrus
ENSPCAG00000004808	TARBP1	67	77.551	ENSPNYG00000019135	si:dkey-85a20.4	66	77.551	Pundamilia_nyererei
ENSPCAG00000004808	TARBP1	81	87.162	ENSRNOG00000053574	Tarbp1	81	87.162	Rattus_norvegicus
ENSPCAG00000004808	TARBP1	78	92.667	ENSRBIG00000043362	TARBP1	82	92.667	Rhinopithecus_bieti
ENSPCAG00000004808	TARBP1	85	92.667	ENSRROG00000029527	TARBP1	85	92.667	Rhinopithecus_roxellana
ENSPCAG00000004808	TARBP1	75	92.000	ENSSBOG00000034503	TARBP1	83	92.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000004808	TARBP1	69	88.000	ENSSHAG00000000013	TARBP1	82	88.000	Sarcophilus_harrisii
ENSPCAG00000004808	TARBP1	69	52.529	ENSSFOG00015002660	si:dkey-85a20.4	77	52.529	Scleropages_formosus
ENSPCAG00000004808	TARBP1	72	76.871	ENSSMAG00000007081	si:dkey-85a20.4	66	76.871	Scophthalmus_maximus
ENSPCAG00000004808	TARBP1	73	77.551	ENSSDUG00000023566	si:dkey-85a20.4	67	77.551	Seriola_dumerili
ENSPCAG00000004808	TARBP1	84	77.551	ENSSLDG00000020200	si:dkey-85a20.4	70	77.551	Seriola_lalandi_dorsalis
ENSPCAG00000004808	TARBP1	74	89.262	ENSSARG00000012207	TARBP1	74	89.262	Sorex_araneus
ENSPCAG00000004808	TARBP1	85	86.577	ENSSPUG00000015364	TARBP1	85	86.577	Sphenodon_punctatus
ENSPCAG00000004808	TARBP1	80	77.551	ENSSPAG00000007213	si:dkey-85a20.4	67	77.551	Stegastes_partitus
ENSPCAG00000004808	TARBP1	85	92.617	ENSSSCG00000010160	TARBP1	85	92.617	Sus_scrofa
ENSPCAG00000004808	TARBP1	70	65.891	ENSTGUG00000010214	TARBP1	86	65.891	Taeniopygia_guttata
ENSPCAG00000004808	TARBP1	75	77.027	ENSTNIG00000016586	si:dkey-85a20.4	76	77.027	Tetraodon_nigroviridis
ENSPCAG00000004808	TARBP1	77	90.541	ENSTTRG00000008707	TARBP1	81	90.541	Tursiops_truncatus
ENSPCAG00000004808	TARBP1	68	87.013	ENSUMAG00000006730	TARBP1	82	87.013	Ursus_maritimus
ENSPCAG00000004808	TARBP1	68	91.667	ENSVPAG00000007665	TARBP1	71	91.667	Vicugna_pacos
ENSPCAG00000004808	TARBP1	71	86.364	ENSVVUG00000007460	TARBP1	82	86.364	Vulpes_vulpes
ENSPCAG00000004808	TARBP1	66	69.231	ENSXETG00000016224	tarbp1	78	69.231	Xenopus_tropicalis
ENSPCAG00000004808	TARBP1	61	76.087	ENSXCOG00000011779	si:dkey-85a20.4	70	76.087	Xiphophorus_couchianus