EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000004891 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 11211 bases
Position: chrGeneScaffold_3431:1829-13039
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004573	RNA_pol_I_A49	PF06870.12	3.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000004878	POLR1E-201	909	-	ENSPCAP00000004573	302 (aa)	-	UPI00018AEC04

Gene Model

Click here to download ENSPCAG00000004891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000004891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000004891	POLR1E	99	69.637	ENSG00000137054	POLR1E	72	69.637	Homo_sapiens
ENSPCAG00000004891	POLR1E	73	35.426	ENSAPOG00000012452	polr1e	55	34.978	Acanthochromis_polyacanthus
ENSPCAG00000004891	POLR1E	100	69.408	ENSAMEG00000010193	POLR1E	63	69.408	Ailuropoda_melanoleuca
ENSPCAG00000004891	POLR1E	76	38.559	ENSACIG00000009884	polr1e	60	38.559	Amphilophus_citrinellus
ENSPCAG00000004891	POLR1E	77	38.819	ENSAOCG00000005665	polr1e	56	38.819	Amphiprion_ocellaris
ENSPCAG00000004891	POLR1E	73	38.839	ENSAPEG00000020581	polr1e	54	38.839	Amphiprion_percula
ENSPCAG00000004891	POLR1E	69	43.602	ENSATEG00000020609	polr1e	50	43.602	Anabas_testudineus
ENSPCAG00000004891	POLR1E	77	59.746	ENSAPLG00000010340	POLR1E	62	59.746	Anas_platyrhynchos
ENSPCAG00000004891	POLR1E	100	69.737	ENSANAG00000038046	POLR1E	73	69.737	Aotus_nancymaae
ENSPCAG00000004891	POLR1E	72	38.565	ENSACLG00000013685	polr1e	52	38.565	Astatotilapia_calliptera
ENSPCAG00000004891	POLR1E	68	38.942	ENSAMXG00000018181	polr1e	50	38.942	Astyanax_mexicanus
ENSPCAG00000004891	POLR1E	100	71.053	ENSBTAG00000012243	POLR1E	73	71.053	Bos_taurus
ENSPCAG00000004891	POLR1E	100	61.842	ENSCJAG00000010512	POLR1E	65	67.568	Callithrix_jacchus
ENSPCAG00000004891	POLR1E	100	70.395	ENSCAFG00000002377	POLR1E	73	70.395	Canis_familiaris
ENSPCAG00000004891	POLR1E	100	70.724	ENSCAFG00020017851	POLR1E	73	70.724	Canis_lupus_dingo
ENSPCAG00000004891	POLR1E	100	70.395	ENSCHIG00000019479	POLR1E	73	70.395	Capra_hircus
ENSPCAG00000004891	POLR1E	100	69.737	ENSTSYG00000002075	POLR1E	73	69.737	Carlito_syrichta
ENSPCAG00000004891	POLR1E	77	84.255	ENSCAPG00000015653	POLR1E	81	84.255	Cavia_aperea
ENSPCAG00000004891	POLR1E	77	84.255	ENSCPOG00000009965	POLR1E	56	84.255	Cavia_porcellus
ENSPCAG00000004891	POLR1E	100	69.079	ENSCCAG00000029460	POLR1E	78	69.079	Cebus_capucinus
ENSPCAG00000004891	POLR1E	99	69.637	ENSCATG00000031732	POLR1E	71	81.590	Cercocebus_atys
ENSPCAG00000004891	POLR1E	82	69.721	ENSCLAG00000012701	POLR1E	66	69.721	Chinchilla_lanigera
ENSPCAG00000004891	POLR1E	99	69.307	ENSCSAG00000010782	POLR1E	72	69.307	Chlorocebus_sabaeus
ENSPCAG00000004891	POLR1E	77	64.681	ENSCPBG00000006923	POLR1E	57	64.681	Chrysemys_picta_bellii
ENSPCAG00000004891	POLR1E	99	69.307	ENSCANG00000036112	POLR1E	71	81.172	Colobus_angolensis_palliatus
ENSPCAG00000004891	POLR1E	100	65.789	ENSCGRG00001006197	Polr1e	70	65.789	Cricetulus_griseus_chok1gshd
ENSPCAG00000004891	POLR1E	100	65.789	ENSCGRG00000006430	Polr1e	70	65.789	Cricetulus_griseus_crigri
ENSPCAG00000004891	POLR1E	69	39.336	ENSCSEG00000005121	polr1e	50	39.336	Cynoglossus_semilaevis
ENSPCAG00000004891	POLR1E	67	38.835	ENSCVAG00000019759	polr1e	50	38.835	Cyprinodon_variegatus
ENSPCAG00000004891	POLR1E	69	41.509	ENSDARG00000006434	polr1e	55	39.912	Danio_rerio
ENSPCAG00000004891	POLR1E	100	70.724	ENSDNOG00000010257	POLR1E	65	70.724	Dasypus_novemcinctus
ENSPCAG00000004891	POLR1E	100	70.066	ENSETEG00000018204	POLR1E	85	70.066	Echinops_telfairi
ENSPCAG00000004891	POLR1E	100	70.395	ENSEASG00005000675	POLR1E	73	70.395	Equus_asinus_asinus
ENSPCAG00000004891	POLR1E	100	70.724	ENSECAG00000014669	POLR1E	73	70.724	Equus_caballus
ENSPCAG00000004891	POLR1E	77	67.660	ENSEEUG00000011928	POLR1E	50	67.660	Erinaceus_europaeus
ENSPCAG00000004891	POLR1E	74	39.556	ENSELUG00000008150	polr1e	54	39.556	Esox_lucius
ENSPCAG00000004891	POLR1E	77	85.169	ENSFCAG00000013081	POLR1E	56	85.169	Felis_catus
ENSPCAG00000004891	POLR1E	77	58.723	ENSFALG00000012950	POLR1E	59	58.723	Ficedula_albicollis
ENSPCAG00000004891	POLR1E	77	81.277	ENSFDAG00000016917	POLR1E	56	81.277	Fukomys_damarensis
ENSPCAG00000004891	POLR1E	67	39.320	ENSFHEG00000009801	polr1e	50	39.320	Fundulus_heteroclitus
ENSPCAG00000004891	POLR1E	70	35.047	ENSGMOG00000003336	POLR1E	52	35.047	Gadus_morhua
ENSPCAG00000004891	POLR1E	77	58.475	ENSGALG00000005395	POLR1E	57	58.475	Gallus_gallus
ENSPCAG00000004891	POLR1E	72	37.946	ENSGAFG00000004850	polr1e	53	37.946	Gambusia_affinis
ENSPCAG00000004891	POLR1E	77	37.190	ENSGACG00000016087	polr1e	58	37.190	Gasterosteus_aculeatus
ENSPCAG00000004891	POLR1E	77	57.806	ENSGAGG00000001659	POLR1E	57	62.439	Gopherus_agassizii
ENSPCAG00000004891	POLR1E	99	69.637	ENSGGOG00000001882	POLR1E	71	79.268	Gorilla_gorilla
ENSPCAG00000004891	POLR1E	72	39.013	ENSHBUG00000002559	polr1e	52	39.013	Haplochromis_burtoni
ENSPCAG00000004891	POLR1E	99	69.307	ENSHGLG00000002036	POLR1E	72	69.307	Heterocephalus_glaber_female
ENSPCAG00000004891	POLR1E	99	69.307	ENSHGLG00100012784	POLR1E	72	69.307	Heterocephalus_glaber_male
ENSPCAG00000004891	POLR1E	69	40.284	ENSHCOG00000002774	polr1e	51	40.284	Hippocampus_comes
ENSPCAG00000004891	POLR1E	69	38.710	ENSIPUG00000003019	polr1e	51	38.710	Ictalurus_punctatus
ENSPCAG00000004891	POLR1E	100	70.395	ENSSTOG00000009810	POLR1E	72	70.395	Ictidomys_tridecemlineatus
ENSPCAG00000004891	POLR1E	77	83.475	ENSJJAG00000020731	Polr1e	54	83.475	Jaculus_jaculus
ENSPCAG00000004891	POLR1E	72	38.009	ENSKMAG00000000046	polr1e	52	38.009	Kryptolebias_marmoratus
ENSPCAG00000004891	POLR1E	71	40.187	ENSLBEG00000003104	polr1e	51	40.187	Labrus_bergylta
ENSPCAG00000004891	POLR1E	77	58.824	ENSLACG00000003416	POLR1E	66	58.824	Latimeria_chalumnae
ENSPCAG00000004891	POLR1E	72	45.662	ENSLOCG00000012859	polr1e	52	45.662	Lepisosteus_oculatus
ENSPCAG00000004891	POLR1E	100	76.316	ENSLAFG00000012831	POLR1E	72	76.316	Loxodonta_africana
ENSPCAG00000004891	POLR1E	99	69.967	ENSMFAG00000045465	POLR1E	71	82.008	Macaca_fascicularis
ENSPCAG00000004891	POLR1E	99	69.967	ENSMMUG00000017892	POLR1E	71	82.008	Macaca_mulatta
ENSPCAG00000004891	POLR1E	99	69.967	ENSMNEG00000040283	POLR1E	68	84.513	Macaca_nemestrina
ENSPCAG00000004891	POLR1E	99	69.967	ENSMLEG00000031135	POLR1E	71	82.008	Mandrillus_leucophaeus
ENSPCAG00000004891	POLR1E	74	36.889	ENSMAMG00000001260	polr1e	54	36.889	Mastacembelus_armatus
ENSPCAG00000004891	POLR1E	72	39.013	ENSMZEG00005021536	polr1e	52	39.013	Maylandia_zebra
ENSPCAG00000004891	POLR1E	54	57.576	ENSMGAG00000009105	-	99	57.576	Meleagris_gallopavo
ENSPCAG00000004891	POLR1E	77	80.932	ENSMAUG00000021044	Polr1e	54	80.932	Mesocricetus_auratus
ENSPCAG00000004891	POLR1E	100	69.737	ENSMICG00000003673	POLR1E	73	69.737	Microcebus_murinus
ENSPCAG00000004891	POLR1E	77	80.851	ENSMOCG00000012920	Polr1e	54	80.508	Microtus_ochrogaster
ENSPCAG00000004891	POLR1E	69	40.284	ENSMMOG00000007391	polr1e	52	40.284	Mola_mola
ENSPCAG00000004891	POLR1E	73	73.756	ENSMODG00000002884	POLR1E	54	73.756	Monodelphis_domestica
ENSPCAG00000004891	POLR1E	69	39.906	ENSMALG00000002665	polr1e	50	39.906	Monopterus_albus
ENSPCAG00000004891	POLR1E	77	76.271	MGP_CAROLIEiJ_G0025967	Polr1e	58	76.271	Mus_caroli
ENSPCAG00000004891	POLR1E	77	76.695	ENSMUSG00000028318	Polr1e	58	76.695	Mus_musculus
ENSPCAG00000004891	POLR1E	77	79.574	MGP_PahariEiJ_G0024114	Polr1e	58	79.574	Mus_pahari
ENSPCAG00000004891	POLR1E	77	75.847	MGP_SPRETEiJ_G0026930	Polr1e	58	75.847	Mus_spretus
ENSPCAG00000004891	POLR1E	100	69.737	ENSMPUG00000006040	POLR1E	65	69.737	Mustela_putorius_furo
ENSPCAG00000004891	POLR1E	100	69.737	ENSMLUG00000012688	POLR1E	70	69.737	Myotis_lucifugus
ENSPCAG00000004891	POLR1E	77	82.203	ENSNGAG00000002520	Polr1e	54	82.203	Nannospalax_galili
ENSPCAG00000004891	POLR1E	72	39.462	ENSNBRG00000016822	polr1e	52	39.462	Neolamprologus_brichardi
ENSPCAG00000004891	POLR1E	99	69.967	ENSNLEG00000003616	POLR1E	71	82.008	Nomascus_leucogenys
ENSPCAG00000004891	POLR1E	77	78.814	ENSOPRG00000014206	POLR1E	66	78.814	Ochotona_princeps
ENSPCAG00000004891	POLR1E	99	69.637	ENSODEG00000014565	POLR1E	70	69.637	Octodon_degus
ENSPCAG00000004891	POLR1E	72	40.000	ENSONIG00000008921	polr1e	52	39.910	Oreochromis_niloticus
ENSPCAG00000004891	POLR1E	55	63.690	ENSOANG00000022571	-	99	63.690	Ornithorhynchus_anatinus
ENSPCAG00000004891	POLR1E	100	65.789	ENSOCUG00000024773	POLR1E	73	65.789	Oryctolagus_cuniculus
ENSPCAG00000004891	POLR1E	68	41.706	ENSORLG00000005143	polr1e	50	41.706	Oryzias_latipes
ENSPCAG00000004891	POLR1E	68	42.180	ENSORLG00020007271	polr1e	53	42.180	Oryzias_latipes_hni
ENSPCAG00000004891	POLR1E	68	41.232	ENSORLG00015000137	polr1e	50	41.232	Oryzias_latipes_hsok
ENSPCAG00000004891	POLR1E	100	69.737	ENSOGAG00000012981	POLR1E	71	69.737	Otolemur_garnettii
ENSPCAG00000004891	POLR1E	100	70.395	ENSOARG00000011465	POLR1E	70	70.395	Ovis_aries
ENSPCAG00000004891	POLR1E	99	69.967	ENSPPAG00000034566	POLR1E	71	82.008	Pan_paniscus
ENSPCAG00000004891	POLR1E	77	85.593	ENSPPRG00000005649	POLR1E	56	85.593	Panthera_pardus
ENSPCAG00000004891	POLR1E	77	85.593	ENSPTIG00000009774	POLR1E	56	85.593	Panthera_tigris_altaica
ENSPCAG00000004891	POLR1E	99	69.967	ENSPTRG00000020944	POLR1E	71	82.008	Pan_troglodytes
ENSPCAG00000004891	POLR1E	99	69.967	ENSPANG00000025563	POLR1E	71	82.008	Papio_anubis
ENSPCAG00000004891	POLR1E	77	41.423	ENSPKIG00000003562	polr1e	57	41.423	Paramormyrops_kingsleyae
ENSPCAG00000004891	POLR1E	77	56.303	ENSPSIG00000003274	POLR1E	55	56.303	Pelodiscus_sinensis
ENSPCAG00000004891	POLR1E	74	41.071	ENSPMGG00000024169	polr1e	53	41.071	Periophthalmus_magnuspinnatus
ENSPCAG00000004891	POLR1E	77	78.390	ENSPEMG00000019151	-	54	78.390	Peromyscus_maniculatus_bairdii
ENSPCAG00000004891	POLR1E	77	62.288	ENSPEMG00000022300	-	53	62.288	Peromyscus_maniculatus_bairdii
ENSPCAG00000004891	POLR1E	73	73.756	ENSPCIG00000014798	POLR1E	54	73.756	Phascolarctos_cinereus
ENSPCAG00000004891	POLR1E	77	38.494	ENSPFOG00000019627	polr1e	53	38.494	Poecilia_formosa
ENSPCAG00000004891	POLR1E	77	38.494	ENSPLAG00000022679	polr1e	56	38.494	Poecilia_latipinna
ENSPCAG00000004891	POLR1E	72	40.000	ENSPMEG00000022123	polr1e	58	40.000	Poecilia_mexicana
ENSPCAG00000004891	POLR1E	77	37.917	ENSPREG00000009470	polr1e	57	37.917	Poecilia_reticulata
ENSPCAG00000004891	POLR1E	99	69.307	ENSPPYG00000019061	POLR1E	72	69.307	Pongo_abelii
ENSPCAG00000004891	POLR1E	100	69.079	ENSPCOG00000027448	POLR1E	73	69.079	Propithecus_coquereli
ENSPCAG00000004891	POLR1E	77	87.288	ENSPVAG00000007940	POLR1E	64	71.053	Pteropus_vampyrus
ENSPCAG00000004891	POLR1E	72	39.013	ENSPNYG00000001032	polr1e	52	39.013	Pundamilia_nyererei
ENSPCAG00000004891	POLR1E	77	77.966	ENSRNOG00000012664	Polr1e	54	77.966	Rattus_norvegicus
ENSPCAG00000004891	POLR1E	99	69.307	ENSRBIG00000034214	POLR1E	80	69.307	Rhinopithecus_bieti
ENSPCAG00000004891	POLR1E	99	69.307	ENSRROG00000031986	POLR1E	71	81.172	Rhinopithecus_roxellana
ENSPCAG00000004891	POLR1E	100	70.066	ENSSBOG00000021415	POLR1E	73	70.066	Saimiri_boliviensis_boliviensis
ENSPCAG00000004891	POLR1E	73	73.303	ENSSHAG00000016084	POLR1E	62	73.303	Sarcophilus_harrisii
ENSPCAG00000004891	POLR1E	71	43.056	ENSSFOG00015002293	polr1e	52	43.056	Scleropages_formosus
ENSPCAG00000004891	POLR1E	74	40.000	ENSSMAG00000011672	polr1e	50	40.000	Scophthalmus_maximus
ENSPCAG00000004891	POLR1E	69	41.232	ENSSDUG00000022279	polr1e	50	41.232	Seriola_dumerili
ENSPCAG00000004891	POLR1E	68	41.232	ENSSLDG00000024918	polr1e	50	41.232	Seriola_lalandi_dorsalis
ENSPCAG00000004891	POLR1E	77	62.288	ENSSPUG00000009499	POLR1E	56	62.288	Sphenodon_punctatus
ENSPCAG00000004891	POLR1E	68	41.627	ENSSPAG00000021240	polr1e	50	41.627	Stegastes_partitus
ENSPCAG00000004891	POLR1E	100	70.395	ENSSSCG00000005347	POLR1E	73	70.395	Sus_scrofa
ENSPCAG00000004891	POLR1E	77	58.051	ENSTGUG00000007169	POLR1E	53	58.051	Taeniopygia_guttata
ENSPCAG00000004891	POLR1E	75	38.462	ENSTRUG00000020779	polr1e	62	38.462	Takifugu_rubripes
ENSPCAG00000004891	POLR1E	68	42.381	ENSTNIG00000017812	polr1e	54	40.889	Tetraodon_nigroviridis
ENSPCAG00000004891	POLR1E	100	70.395	ENSTBEG00000013786	POLR1E	65	70.395	Tupaia_belangeri
ENSPCAG00000004891	POLR1E	77	84.937	ENSTTRG00000008294	POLR1E	51	84.937	Tursiops_truncatus
ENSPCAG00000004891	POLR1E	100	70.066	ENSUAMG00000012474	POLR1E	73	70.066	Ursus_americanus
ENSPCAG00000004891	POLR1E	100	70.066	ENSUMAG00000011496	POLR1E	73	70.066	Ursus_maritimus
ENSPCAG00000004891	POLR1E	100	70.395	ENSVVUG00000019954	POLR1E	73	70.395	Vulpes_vulpes
ENSPCAG00000004891	POLR1E	77	48.319	ENSXETG00000006533	polr1e	57	48.319	Xenopus_tropicalis
ENSPCAG00000004891	POLR1E	72	38.839	ENSXCOG00000013706	polr1e	53	38.839	Xiphophorus_couchianus
ENSPCAG00000004891	POLR1E	72	39.286	ENSXMAG00000012484	polr1e	53	39.286	Xiphophorus_maculatus