EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000005076 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 21814 bases
Position: chrGeneScaffold_3518:58620-80433
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004763	RTC	PF01137.21	5.9e-81	1	1
ENSPCAP00000004763	RTC_insert	PF05189.13	3.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005085	RTCA-201	1101	-	ENSPCAP00000004763	366 (aa)	-	UPI00018AF766

Gene Model

Click here to download ENSPCAG00000005076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005076	RTCA	100	90.710	ENSG00000137996	RTCA	100	91.837	Homo_sapiens
ENSPCAG00000005076	RTCA	99	69.806	ENSAPOG00000001345	rtca	98	69.806	Acanthochromis_polyacanthus
ENSPCAG00000005076	RTCA	73	89.219	ENSAMEG00000008855	RTCA	100	89.219	Ailuropoda_melanoleuca
ENSPCAG00000005076	RTCA	100	68.665	ENSACIG00000019643	rtca	100	68.665	Amphilophus_citrinellus
ENSPCAG00000005076	RTCA	100	69.126	ENSAOCG00000014979	rtca	99	69.126	Amphiprion_ocellaris
ENSPCAG00000005076	RTCA	100	69.126	ENSAPEG00000006945	rtca	99	69.126	Amphiprion_percula
ENSPCAG00000005076	RTCA	96	68.661	ENSATEG00000006315	rtca	96	68.661	Anabas_testudineus
ENSPCAG00000005076	RTCA	96	76.836	ENSAPLG00000015430	RTCA	100	76.836	Anas_platyrhynchos
ENSPCAG00000005076	RTCA	100	90.164	ENSANAG00000025446	RTCA	100	90.164	Aotus_nancymaae
ENSPCAG00000005076	RTCA	100	67.575	ENSACLG00000020770	rtca	99	67.575	Astatotilapia_calliptera
ENSPCAG00000005076	RTCA	100	69.672	ENSAMXG00000043271	rtca	100	69.672	Astyanax_mexicanus
ENSPCAG00000005076	RTCA	100	91.257	ENSBTAG00000006321	RTCA	100	91.257	Bos_taurus
ENSPCAG00000005076	RTCA	100	90.164	ENSCJAG00000003398	RTCA	100	90.164	Callithrix_jacchus
ENSPCAG00000005076	RTCA	100	90.984	ENSCAFG00000020010	RTCA	68	90.984	Canis_familiaris
ENSPCAG00000005076	RTCA	100	90.984	ENSCAFG00020011528	RTCA	57	90.984	Canis_lupus_dingo
ENSPCAG00000005076	RTCA	100	90.984	ENSCHIG00000018937	RTCA	100	90.984	Capra_hircus
ENSPCAG00000005076	RTCA	100	88.798	ENSTSYG00000011305	RTCA	100	88.798	Carlito_syrichta
ENSPCAG00000005076	RTCA	100	89.891	ENSCCAG00000021844	RTCA	100	89.891	Cebus_capucinus
ENSPCAG00000005076	RTCA	100	87.599	ENSCATG00000019364	RTCA	100	90.291	Cercocebus_atys
ENSPCAG00000005076	RTCA	87	90.221	ENSCLAG00000006125	RTCA	100	90.221	Chinchilla_lanigera
ENSPCAG00000005076	RTCA	100	90.984	ENSCSAG00000001509	RTCA	100	90.984	Chlorocebus_sabaeus
ENSPCAG00000005076	RTCA	100	90.984	ENSCHOG00000005211	RTCA	100	90.984	Choloepus_hoffmanni
ENSPCAG00000005076	RTCA	99	81.163	ENSCPBG00000026658	RTCA	99	81.163	Chrysemys_picta_bellii
ENSPCAG00000005076	RTCA	98	52.778	ENSCING00000007875	-	98	52.778	Ciona_intestinalis
ENSPCAG00000005076	RTCA	98	52.368	ENSCSAVG00000007269	-	98	52.368	Ciona_savignyi
ENSPCAG00000005076	RTCA	100	90.710	ENSCANG00000040106	RTCA	100	90.710	Colobus_angolensis_palliatus
ENSPCAG00000005076	RTCA	73	86.245	ENSCGRG00001013163	Rtca	85	86.245	Cricetulus_griseus_chok1gshd
ENSPCAG00000005076	RTCA	100	65.395	ENSCSEG00000000530	rtca	98	65.395	Cynoglossus_semilaevis
ENSPCAG00000005076	RTCA	100	56.284	ENSCVAG00000021809	rtca	100	56.284	Cyprinodon_variegatus
ENSPCAG00000005076	RTCA	100	70.219	ENSDARG00000002215	rtca	100	70.219	Danio_rerio
ENSPCAG00000005076	RTCA	100	90.984	ENSDNOG00000000456	RTCA	100	90.984	Dasypus_novemcinctus
ENSPCAG00000005076	RTCA	100	89.344	ENSDORG00000005448	Rtca	100	89.344	Dipodomys_ordii
ENSPCAG00000005076	RTCA	99	36.464	FBgn0025630	Rtca	99	36.464	Drosophila_melanogaster
ENSPCAG00000005076	RTCA	95	51.412	ENSEBUG00000008556	rtca	97	51.412	Eptatretus_burgeri
ENSPCAG00000005076	RTCA	100	90.437	ENSEASG00005015926	RTCA	100	90.437	Equus_asinus_asinus
ENSPCAG00000005076	RTCA	100	90.437	ENSECAG00000019831	RTCA	100	90.437	Equus_caballus
ENSPCAG00000005076	RTCA	91	80.347	ENSEEUG00000001165	RTCA	100	80.347	Erinaceus_europaeus
ENSPCAG00000005076	RTCA	99	70.083	ENSELUG00000003741	rtca	99	70.083	Esox_lucius
ENSPCAG00000005076	RTCA	100	91.257	ENSFCAG00000024460	RTCA	100	91.257	Felis_catus
ENSPCAG00000005076	RTCA	92	80.000	ENSFALG00000002443	RTCA	90	80.000	Ficedula_albicollis
ENSPCAG00000005076	RTCA	100	91.803	ENSFDAG00000012070	-	100	91.803	Fukomys_damarensis
ENSPCAG00000005076	RTCA	97	71.989	ENSFDAG00000016084	-	98	71.989	Fukomys_damarensis
ENSPCAG00000005076	RTCA	59	65.116	ENSFHEG00000002868	rtca	96	64.159	Fundulus_heteroclitus
ENSPCAG00000005076	RTCA	100	65.301	ENSGMOG00000013264	rtca	100	65.301	Gadus_morhua
ENSPCAG00000005076	RTCA	99	80.332	ENSGALG00000005277	RTCA	99	80.332	Gallus_gallus
ENSPCAG00000005076	RTCA	100	68.579	ENSGAFG00000011853	rtca	99	68.579	Gambusia_affinis
ENSPCAG00000005076	RTCA	99	67.036	ENSGACG00000013497	rtca	99	67.036	Gasterosteus_aculeatus
ENSPCAG00000005076	RTCA	78	85.563	ENSGAGG00000023306	RTCA	97	85.563	Gopherus_agassizii
ENSPCAG00000005076	RTCA	100	90.710	ENSGGOG00000009546	-	100	90.710	Gorilla_gorilla
ENSPCAG00000005076	RTCA	100	89.891	ENSGGOG00000044018	-	100	89.891	Gorilla_gorilla
ENSPCAG00000005076	RTCA	100	67.302	ENSHBUG00000002114	rtca	99	67.302	Haplochromis_burtoni
ENSPCAG00000005076	RTCA	100	90.710	ENSHGLG00000002617	RTCA	100	90.710	Heterocephalus_glaber_female
ENSPCAG00000005076	RTCA	100	90.710	ENSHGLG00100006056	RTCA	100	90.710	Heterocephalus_glaber_male
ENSPCAG00000005076	RTCA	100	62.022	ENSHCOG00000020628	rtca	89	62.022	Hippocampus_comes
ENSPCAG00000005076	RTCA	100	70.492	ENSIPUG00000024803	rtca	100	70.492	Ictalurus_punctatus
ENSPCAG00000005076	RTCA	100	79.292	ENSSTOG00000033099	-	100	79.292	Ictidomys_tridecemlineatus
ENSPCAG00000005076	RTCA	100	83.880	ENSSTOG00000013528	-	100	83.880	Ictidomys_tridecemlineatus
ENSPCAG00000005076	RTCA	100	64.481	ENSJJAG00000016178	Rtca	100	64.481	Jaculus_jaculus
ENSPCAG00000005076	RTCA	100	68.033	ENSKMAG00000006651	rtca	99	68.033	Kryptolebias_marmoratus
ENSPCAG00000005076	RTCA	88	65.421	ENSLBEG00000002448	-	99	65.421	Labrus_bergylta
ENSPCAG00000005076	RTCA	99	66.205	ENSLBEG00000028971	rtca	99	66.205	Labrus_bergylta
ENSPCAG00000005076	RTCA	100	74.317	ENSLACG00000013666	RTCA	100	74.317	Latimeria_chalumnae
ENSPCAG00000005076	RTCA	100	70.492	ENSLOCG00000000093	rtca	99	70.492	Lepisosteus_oculatus
ENSPCAG00000005076	RTCA	100	93.443	ENSLAFG00000001473	RTCA	100	93.443	Loxodonta_africana
ENSPCAG00000005076	RTCA	100	90.984	ENSMFAG00000034132	RTCA	100	90.984	Macaca_fascicularis
ENSPCAG00000005076	RTCA	100	90.984	ENSMMUG00000019105	RTCA	100	90.984	Macaca_mulatta
ENSPCAG00000005076	RTCA	84	90.615	ENSMNEG00000037163	RTCA	100	90.615	Macaca_nemestrina
ENSPCAG00000005076	RTCA	100	74.317	ENSMLEG00000042151	RTCA	100	74.317	Mandrillus_leucophaeus
ENSPCAG00000005076	RTCA	100	69.945	ENSMAMG00000016536	rtca	100	69.945	Mastacembelus_armatus
ENSPCAG00000005076	RTCA	100	67.575	ENSMZEG00005017945	rtca	99	67.575	Maylandia_zebra
ENSPCAG00000005076	RTCA	87	77.743	ENSMGAG00000006892	RTCA	99	77.743	Meleagris_gallopavo
ENSPCAG00000005076	RTCA	100	87.158	ENSMAUG00000008488	Rtca	100	87.158	Mesocricetus_auratus
ENSPCAG00000005076	RTCA	84	91.262	ENSMICG00000008643	RTCA	100	91.262	Microcebus_murinus
ENSPCAG00000005076	RTCA	100	87.705	ENSMOCG00000016660	Rtca	100	87.705	Microtus_ochrogaster
ENSPCAG00000005076	RTCA	84	67.961	ENSMMOG00000007750	rtca	100	67.961	Mola_mola
ENSPCAG00000005076	RTCA	100	86.612	ENSMODG00000003557	RTCA	100	86.612	Monodelphis_domestica
ENSPCAG00000005076	RTCA	100	69.672	ENSMALG00000020844	rtca	100	69.672	Monopterus_albus
ENSPCAG00000005076	RTCA	100	87.158	MGP_CAROLIEiJ_G0025565	Rtca	100	89.437	Mus_caroli
ENSPCAG00000005076	RTCA	100	87.158	ENSMUSG00000000339	Rtca	100	89.437	Mus_musculus
ENSPCAG00000005076	RTCA	100	87.432	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSPCAG00000005076	RTCA	100	86.885	MGP_SPRETEiJ_G0026515	Rtca	100	88.732	Mus_spretus
ENSPCAG00000005076	RTCA	100	91.530	ENSMPUG00000012119	RTCA	100	91.530	Mustela_putorius_furo
ENSPCAG00000005076	RTCA	100	83.924	ENSMLUG00000009922	RTCA	100	83.924	Myotis_lucifugus
ENSPCAG00000005076	RTCA	100	87.705	ENSNGAG00000011540	Rtca	99	87.705	Nannospalax_galili
ENSPCAG00000005076	RTCA	100	67.575	ENSNBRG00000003062	rtca	99	67.575	Neolamprologus_brichardi
ENSPCAG00000005076	RTCA	100	90.710	ENSNLEG00000031426	RTCA	100	90.710	Nomascus_leucogenys
ENSPCAG00000005076	RTCA	58	90.244	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSPCAG00000005076	RTCA	73	89.591	ENSOPRG00000012092	RTCA	71	89.591	Ochotona_princeps
ENSPCAG00000005076	RTCA	95	91.667	ENSODEG00000006990	RTCA	96	91.738	Octodon_degus
ENSPCAG00000005076	RTCA	100	67.847	ENSONIG00000007753	rtca	99	67.847	Oreochromis_niloticus
ENSPCAG00000005076	RTCA	87	85.489	ENSOANG00000012055	RTCA	98	85.489	Ornithorhynchus_anatinus
ENSPCAG00000005076	RTCA	100	92.077	ENSOCUG00000014247	RTCA	100	92.077	Oryctolagus_cuniculus
ENSPCAG00000005076	RTCA	100	67.486	ENSORLG00000013605	rtca	100	67.486	Oryzias_latipes
ENSPCAG00000005076	RTCA	100	67.486	ENSORLG00020001904	rtca	100	67.486	Oryzias_latipes_hni
ENSPCAG00000005076	RTCA	100	67.486	ENSORLG00015021064	rtca	100	67.486	Oryzias_latipes_hsok
ENSPCAG00000005076	RTCA	100	68.306	ENSOMEG00000000756	rtca	100	68.306	Oryzias_melastigma
ENSPCAG00000005076	RTCA	100	81.967	ENSOGAG00000005627	RTCA	100	81.967	Otolemur_garnettii
ENSPCAG00000005076	RTCA	87	89.937	ENSOARG00000018122	RTCA	100	89.937	Ovis_aries
ENSPCAG00000005076	RTCA	100	87.071	ENSPPAG00000035119	RTCA	100	89.968	Pan_paniscus
ENSPCAG00000005076	RTCA	100	90.984	ENSPPRG00000000350	RTCA	100	90.984	Panthera_pardus
ENSPCAG00000005076	RTCA	100	91.530	ENSPTIG00000012816	RTCA	100	91.530	Panthera_tigris_altaica
ENSPCAG00000005076	RTCA	100	87.071	ENSPTRG00000001004	RTCA	100	89.968	Pan_troglodytes
ENSPCAG00000005076	RTCA	100	90.984	ENSPANG00000000346	RTCA	100	90.984	Papio_anubis
ENSPCAG00000005076	RTCA	100	70.492	ENSPKIG00000001653	rtca	100	70.492	Paramormyrops_kingsleyae
ENSPCAG00000005076	RTCA	99	81.994	ENSPSIG00000011408	RTCA	99	81.994	Pelodiscus_sinensis
ENSPCAG00000005076	RTCA	100	87.432	ENSPEMG00000018582	Rtca	100	87.432	Peromyscus_maniculatus_bairdii
ENSPCAG00000005076	RTCA	99	56.986	ENSPMAG00000009110	rtca	99	56.986	Petromyzon_marinus
ENSPCAG00000005076	RTCA	100	86.885	ENSPCIG00000007684	RTCA	100	86.885	Phascolarctos_cinereus
ENSPCAG00000005076	RTCA	100	68.937	ENSPFOG00000004824	rtca	100	68.937	Poecilia_formosa
ENSPCAG00000005076	RTCA	100	69.126	ENSPLAG00000011753	rtca	99	69.126	Poecilia_latipinna
ENSPCAG00000005076	RTCA	100	69.126	ENSPMEG00000020469	rtca	99	69.126	Poecilia_mexicana
ENSPCAG00000005076	RTCA	100	69.945	ENSPREG00000001365	rtca	99	69.945	Poecilia_reticulata
ENSPCAG00000005076	RTCA	100	90.710	ENSPPYG00000001115	RTCA	100	90.710	Pongo_abelii
ENSPCAG00000005076	RTCA	100	92.077	ENSPCOG00000005603	RTCA	100	92.077	Propithecus_coquereli
ENSPCAG00000005076	RTCA	100	86.544	ENSPVAG00000009478	RTCA	100	86.544	Pteropus_vampyrus
ENSPCAG00000005076	RTCA	100	67.575	ENSPNYG00000004722	rtca	99	67.575	Pundamilia_nyererei
ENSPCAG00000005076	RTCA	100	69.126	ENSPNAG00000022270	rtca	100	69.126	Pygocentrus_nattereri
ENSPCAG00000005076	RTCA	100	87.158	ENSRNOG00000014575	Rtca	100	87.158	Rattus_norvegicus
ENSPCAG00000005076	RTCA	100	87.335	ENSRBIG00000041180	RTCA	100	89.968	Rhinopithecus_bieti
ENSPCAG00000005076	RTCA	100	90.437	ENSRROG00000024929	RTCA	100	90.437	Rhinopithecus_roxellana
ENSPCAG00000005076	RTCA	100	89.617	ENSSBOG00000028626	RTCA	100	89.617	Saimiri_boliviensis_boliviensis
ENSPCAG00000005076	RTCA	100	87.432	ENSSHAG00000001758	RTCA	100	87.432	Sarcophilus_harrisii
ENSPCAG00000005076	RTCA	98	66.389	ENSSMAG00000014680	rtca	97	66.389	Scophthalmus_maximus
ENSPCAG00000005076	RTCA	98	68.333	ENSSDUG00000015585	rtca	97	68.333	Seriola_dumerili
ENSPCAG00000005076	RTCA	96	68.661	ENSSLDG00000018985	rtca	95	68.661	Seriola_lalandi_dorsalis
ENSPCAG00000005076	RTCA	87	82.650	ENSSARG00000013993	RTCA	100	82.650	Sorex_araneus
ENSPCAG00000005076	RTCA	100	67.486	ENSSPAG00000011938	rtca	99	67.486	Stegastes_partitus
ENSPCAG00000005076	RTCA	100	91.257	ENSSSCG00000006865	RTCA	100	91.257	Sus_scrofa
ENSPCAG00000005076	RTCA	99	80.609	ENSTGUG00000005154	RTCA	99	80.609	Taeniopygia_guttata
ENSPCAG00000005076	RTCA	100	68.033	ENSTRUG00000008799	rtca	100	68.033	Takifugu_rubripes
ENSPCAG00000005076	RTCA	100	69.126	ENSTNIG00000004725	rtca	100	69.126	Tetraodon_nigroviridis
ENSPCAG00000005076	RTCA	58	83.810	ENSTBEG00000000943	RTCA	81	57.219	Tupaia_belangeri
ENSPCAG00000005076	RTCA	100	87.599	ENSTTRG00000015327	RTCA	100	87.599	Tursiops_truncatus
ENSPCAG00000005076	RTCA	94	88.921	ENSUAMG00000017265	RTCA	96	88.921	Ursus_americanus
ENSPCAG00000005076	RTCA	100	90.164	ENSUMAG00000007881	RTCA	100	90.164	Ursus_maritimus
ENSPCAG00000005076	RTCA	87	86.120	ENSVPAG00000001039	RTCA	84	86.120	Vicugna_pacos
ENSPCAG00000005076	RTCA	100	90.710	ENSVVUG00000022041	RTCA	68	90.710	Vulpes_vulpes
ENSPCAG00000005076	RTCA	99	62.568	ENSXETG00000031661	RTCA	99	62.568	Xenopus_tropicalis
ENSPCAG00000005076	RTCA	100	60.929	ENSXCOG00000008002	rtca	100	60.929	Xiphophorus_couchianus
ENSPCAG00000005076	RTCA	100	68.852	ENSXMAG00000005482	rtca	99	68.852	Xiphophorus_maculatus