EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000005129 (Gene tree)
Gene ID: -
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 17414 bases
Position: chrGeneScaffold_951:5386-22799
Accession: 10769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004844	DUF382	PF04037.13	6.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005171	SF3B2-201	2688	-	ENSPCAP00000004844	895 (aa)	-	UPI00018AF4E7

Gene Model

Click here to download ENSPCAG00000005129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005129	SF3B2	100	97.216	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSPCAG00000005129	SF3B2	95	69.535	ENSAPOG00000001974	sf3b2	82	74.425	Acanthochromis_polyacanthus
ENSPCAG00000005129	SF3B2	100	97.547	ENSAMEG00000017206	SF3B2	100	97.547	Ailuropoda_melanoleuca
ENSPCAG00000005129	SF3B2	85	71.759	ENSACIG00000000624	sf3b2	87	73.161	Amphilophus_citrinellus
ENSPCAG00000005129	SF3B2	97	70.328	ENSAOCG00000009207	sf3b2	86	75.228	Amphiprion_ocellaris
ENSPCAG00000005129	SF3B2	97	69.473	ENSAPEG00000002762	sf3b2	87	73.616	Amphiprion_percula
ENSPCAG00000005129	SF3B2	100	66.007	ENSACAG00000008615	SF3B2	100	65.897	Anolis_carolinensis
ENSPCAG00000005129	SF3B2	100	97.219	ENSANAG00000029120	SF3B2	100	97.219	Aotus_nancymaae
ENSPCAG00000005129	SF3B2	97	65.795	ENSACLG00000014771	sf3b2	87	75.130	Astatotilapia_calliptera
ENSPCAG00000005129	SF3B2	84	72.585	ENSAMXG00000007929	sf3b2	86	76.923	Astyanax_mexicanus
ENSPCAG00000005129	SF3B2	100	96.875	ENSBTAG00000002778	SF3B2	100	96.875	Bos_taurus
ENSPCAG00000005129	SF3B2	59	51.060	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSPCAG00000005129	SF3B2	100	97.330	ENSCJAG00000001656	SF3B2	100	97.330	Callithrix_jacchus
ENSPCAG00000005129	SF3B2	100	97.654	ENSCAFG00000013033	SF3B2	100	97.654	Canis_familiaris
ENSPCAG00000005129	SF3B2	100	97.654	ENSCAFG00020015382	SF3B2	100	97.654	Canis_lupus_dingo
ENSPCAG00000005129	SF3B2	100	96.983	ENSCHIG00000011211	SF3B2	100	96.983	Capra_hircus
ENSPCAG00000005129	SF3B2	100	97.216	ENSTSYG00000000959	SF3B2	100	97.216	Carlito_syrichta
ENSPCAG00000005129	SF3B2	60	80.808	ENSCAPG00000006065	SF3B2	89	100.000	Cavia_aperea
ENSPCAG00000005129	SF3B2	91	93.995	ENSCPOG00000008294	SF3B2	100	93.995	Cavia_porcellus
ENSPCAG00000005129	SF3B2	100	97.330	ENSCCAG00000035256	SF3B2	100	97.330	Cebus_capucinus
ENSPCAG00000005129	SF3B2	100	97.327	ENSCATG00000042240	SF3B2	100	97.327	Cercocebus_atys
ENSPCAG00000005129	SF3B2	100	94.989	ENSCLAG00000016852	SF3B2	100	94.989	Chinchilla_lanigera
ENSPCAG00000005129	SF3B2	100	97.327	ENSCSAG00000008121	SF3B2	100	97.327	Chlorocebus_sabaeus
ENSPCAG00000005129	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	92	91.237	Choloepus_hoffmanni
ENSPCAG00000005129	SF3B2	100	73.319	ENSCPBG00000022465	SF3B2	100	78.965	Chrysemys_picta_bellii
ENSPCAG00000005129	SF3B2	72	60.736	ENSCING00000005665	-	99	61.164	Ciona_intestinalis
ENSPCAG00000005129	SF3B2	70	60.188	ENSCSAVG00000002029	-	99	59.937	Ciona_savignyi
ENSPCAG00000005129	SF3B2	100	97.327	ENSCANG00000039680	SF3B2	100	97.327	Colobus_angolensis_palliatus
ENSPCAG00000005129	SF3B2	100	95.212	ENSCGRG00001015741	Sf3b2	100	95.212	Cricetulus_griseus_chok1gshd
ENSPCAG00000005129	SF3B2	100	95.212	ENSCGRG00000018110	Sf3b2	100	95.212	Cricetulus_griseus_crigri
ENSPCAG00000005129	SF3B2	74	74.551	ENSCSEG00000000230	sf3b2	78	76.972	Cynoglossus_semilaevis
ENSPCAG00000005129	SF3B2	84	72.047	ENSCVAG00000003357	sf3b2	85	73.664	Cyprinodon_variegatus
ENSPCAG00000005129	SF3B2	79	74.136	ENSDARG00000018049	sf3b2	86	74.827	Danio_rerio
ENSPCAG00000005129	SF3B2	100	96.201	ENSDNOG00000009484	SF3B2	100	96.201	Dasypus_novemcinctus
ENSPCAG00000005129	SF3B2	100	94.549	ENSDORG00000002495	Sf3b2	100	94.549	Dipodomys_ordii
ENSPCAG00000005129	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSPCAG00000005129	SF3B2	98	58.874	ENSEBUG00000013703	sf3b2	99	59.868	Eptatretus_burgeri
ENSPCAG00000005129	SF3B2	100	97.768	ENSEASG00005004508	SF3B2	100	97.768	Equus_asinus_asinus
ENSPCAG00000005129	SF3B2	100	97.768	ENSECAG00000024461	SF3B2	100	97.768	Equus_caballus
ENSPCAG00000005129	SF3B2	60	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSPCAG00000005129	SF3B2	97	67.213	ENSELUG00000005586	sf3b2	97	67.834	Esox_lucius
ENSPCAG00000005129	SF3B2	100	97.765	ENSFCAG00000013289	SF3B2	100	97.765	Felis_catus
ENSPCAG00000005129	SF3B2	78	70.455	ENSFALG00000014653	SF3B2	98	68.883	Ficedula_albicollis
ENSPCAG00000005129	SF3B2	100	96.124	ENSFDAG00000019806	SF3B2	100	96.124	Fukomys_damarensis
ENSPCAG00000005129	SF3B2	84	70.207	ENSFHEG00000020968	sf3b2	86	72.150	Fundulus_heteroclitus
ENSPCAG00000005129	SF3B2	72	77.863	ENSGMOG00000012131	sf3b2	96	80.818	Gadus_morhua
ENSPCAG00000005129	SF3B2	97	67.114	ENSGAFG00000001675	sf3b2	86	71.392	Gambusia_affinis
ENSPCAG00000005129	SF3B2	72	79.077	ENSGACG00000019012	sf3b2	96	80.000	Gasterosteus_aculeatus
ENSPCAG00000005129	SF3B2	100	80.044	ENSGAGG00000023916	SF3B2	100	79.933	Gopherus_agassizii
ENSPCAG00000005129	SF3B2	100	97.216	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSPCAG00000005129	SF3B2	97	66.136	ENSHBUG00000017349	sf3b2	87	75.130	Haplochromis_burtoni
ENSPCAG00000005129	SF3B2	100	95.100	ENSHGLG00000010807	SF3B2	100	95.100	Heterocephalus_glaber_female
ENSPCAG00000005129	SF3B2	100	96.993	ENSHGLG00100006361	SF3B2	100	96.993	Heterocephalus_glaber_male
ENSPCAG00000005129	SF3B2	97	66.478	ENSHCOG00000016203	sf3b2	97	65.912	Hippocampus_comes
ENSPCAG00000005129	SF3B2	81	72.395	ENSIPUG00000009383	sf3b2	85	72.244	Ictalurus_punctatus
ENSPCAG00000005129	SF3B2	100	97.216	ENSSTOG00000028892	SF3B2	100	97.216	Ictidomys_tridecemlineatus
ENSPCAG00000005129	SF3B2	100	95.006	ENSJJAG00000018193	Sf3b2	100	95.006	Jaculus_jaculus
ENSPCAG00000005129	SF3B2	59	87.782	ENSKMAG00000020181	sf3b2	84	73.844	Kryptolebias_marmoratus
ENSPCAG00000005129	SF3B2	97	68.764	ENSLBEG00000027739	sf3b2	88	79.154	Labrus_bergylta
ENSPCAG00000005129	SF3B2	71	81.250	ENSLACG00000010429	SF3B2	98	72.635	Latimeria_chalumnae
ENSPCAG00000005129	SF3B2	100	96.536	ENSLAFG00000002128	SF3B2	100	96.536	Loxodonta_africana
ENSPCAG00000005129	SF3B2	100	97.219	ENSMFAG00000003064	SF3B2	100	97.219	Macaca_fascicularis
ENSPCAG00000005129	SF3B2	100	93.408	ENSMMUG00000011743	SF3B2	100	93.408	Macaca_mulatta
ENSPCAG00000005129	SF3B2	100	97.216	ENSMNEG00000034437	SF3B2	100	97.216	Macaca_nemestrina
ENSPCAG00000005129	SF3B2	100	97.105	ENSMLEG00000029373	SF3B2	100	97.105	Mandrillus_leucophaeus
ENSPCAG00000005129	SF3B2	84	75.032	ENSMAMG00000014103	sf3b2	86	75.161	Mastacembelus_armatus
ENSPCAG00000005129	SF3B2	85	73.187	ENSMZEG00005020789	sf3b2	86	75.130	Maylandia_zebra
ENSPCAG00000005129	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSPCAG00000005129	SF3B2	100	96.993	ENSMICG00000008565	-	100	96.993	Microcebus_murinus
ENSPCAG00000005129	SF3B2	100	93.980	ENSMICG00000016942	-	83	95.401	Microcebus_murinus
ENSPCAG00000005129	SF3B2	100	95.100	ENSMOCG00000003136	Sf3b2	100	95.100	Microtus_ochrogaster
ENSPCAG00000005129	SF3B2	97	65.834	ENSMMOG00000012928	sf3b2	86	72.310	Mola_mola
ENSPCAG00000005129	SF3B2	71	87.874	ENSMODG00000025020	-	99	86.929	Monodelphis_domestica
ENSPCAG00000005129	SF3B2	85	91.492	ENSMODG00000008490	-	92	91.492	Monodelphis_domestica
ENSPCAG00000005129	SF3B2	80	72.131	ENSMALG00000015137	sf3b2	83	73.997	Monopterus_albus
ENSPCAG00000005129	SF3B2	100	94.209	MGP_CAROLIEiJ_G0022539	Sf3b2	100	94.209	Mus_caroli
ENSPCAG00000005129	SF3B2	100	94.878	ENSMUSG00000024853	Sf3b2	100	94.878	Mus_musculus
ENSPCAG00000005129	SF3B2	100	94.766	MGP_PahariEiJ_G0014036	Sf3b2	100	94.766	Mus_pahari
ENSPCAG00000005129	SF3B2	100	94.766	MGP_SPRETEiJ_G0023453	Sf3b2	100	94.766	Mus_spretus
ENSPCAG00000005129	SF3B2	100	97.542	ENSMPUG00000011349	SF3B2	100	97.542	Mustela_putorius_furo
ENSPCAG00000005129	SF3B2	100	96.652	ENSMLUG00000011136	SF3B2	100	96.652	Myotis_lucifugus
ENSPCAG00000005129	SF3B2	100	95.100	ENSNGAG00000012103	Sf3b2	100	95.100	Nannospalax_galili
ENSPCAG00000005129	SF3B2	84	94.256	ENSNLEG00000006007	SF3B2	100	90.340	Nomascus_leucogenys
ENSPCAG00000005129	SF3B2	86	93.466	ENSMEUG00000000019	SF3B2	91	93.466	Notamacropus_eugenii
ENSPCAG00000005129	SF3B2	100	91.203	ENSODEG00000017764	SF3B2	100	90.535	Octodon_degus
ENSPCAG00000005129	SF3B2	97	67.269	ENSONIG00000013068	sf3b2	86	75.486	Oreochromis_niloticus
ENSPCAG00000005129	SF3B2	87	79.371	ENSOANG00000012482	SF3B2	97	79.427	Ornithorhynchus_anatinus
ENSPCAG00000005129	SF3B2	100	92.205	ENSOCUG00000015722	-	100	92.205	Oryctolagus_cuniculus
ENSPCAG00000005129	SF3B2	62	63.063	ENSOCUG00000024154	-	95	66.211	Oryctolagus_cuniculus
ENSPCAG00000005129	SF3B2	97	67.342	ENSORLG00000008235	sf3b2	85	74.901	Oryzias_latipes
ENSPCAG00000005129	SF3B2	97	67.342	ENSORLG00020005357	sf3b2	88	74.901	Oryzias_latipes_hni
ENSPCAG00000005129	SF3B2	97	67.455	ENSORLG00015022454	sf3b2	82	78.639	Oryzias_latipes_hsok
ENSPCAG00000005129	SF3B2	100	91.203	ENSOGAG00000005799	SF3B2	100	91.759	Otolemur_garnettii
ENSPCAG00000005129	SF3B2	100	90.788	ENSOARG00000002125	SF3B2	100	97.687	Ovis_aries
ENSPCAG00000005129	SF3B2	100	97.216	ENSPPAG00000007359	SF3B2	100	97.216	Pan_paniscus
ENSPCAG00000005129	SF3B2	100	97.765	ENSPPRG00000013334	SF3B2	100	97.765	Panthera_pardus
ENSPCAG00000005129	SF3B2	100	97.654	ENSPTIG00000015022	SF3B2	100	97.654	Panthera_tigris_altaica
ENSPCAG00000005129	SF3B2	100	97.216	ENSPTRG00000003912	SF3B2	100	97.216	Pan_troglodytes
ENSPCAG00000005129	SF3B2	100	97.327	ENSPANG00000008593	SF3B2	100	97.327	Papio_anubis
ENSPCAG00000005129	SF3B2	97	68.799	ENSPKIG00000016576	sf3b2	86	80.063	Paramormyrops_kingsleyae
ENSPCAG00000005129	SF3B2	93	80.569	ENSPSIG00000003158	SF3B2	100	87.844	Pelodiscus_sinensis
ENSPCAG00000005129	SF3B2	84	68.816	ENSPMGG00000000819	sf3b2	87	67.666	Periophthalmus_magnuspinnatus
ENSPCAG00000005129	SF3B2	100	95.323	ENSPEMG00000015437	Sf3b2	100	95.323	Peromyscus_maniculatus_bairdii
ENSPCAG00000005129	SF3B2	93	80.120	ENSPEMG00000015451	-	91	82.330	Peromyscus_maniculatus_bairdii
ENSPCAG00000005129	SF3B2	85	90.826	ENSPCIG00000008381	SF3B2	100	88.669	Phascolarctos_cinereus
ENSPCAG00000005129	SF3B2	97	68.049	ENSPFOG00000002552	sf3b2	86	73.092	Poecilia_formosa
ENSPCAG00000005129	SF3B2	97	68.049	ENSPLAG00000001471	sf3b2	86	73.221	Poecilia_latipinna
ENSPCAG00000005129	SF3B2	97	66.704	ENSPMEG00000013180	sf3b2	86	73.057	Poecilia_mexicana
ENSPCAG00000005129	SF3B2	84	71.039	ENSPREG00000002665	sf3b2	86	72.739	Poecilia_reticulata
ENSPCAG00000005129	SF3B2	75	94.807	ENSPPYG00000003034	-	99	94.807	Pongo_abelii
ENSPCAG00000005129	SF3B2	100	97.216	ENSPCOG00000025375	SF3B2	100	97.216	Propithecus_coquereli
ENSPCAG00000005129	SF3B2	55	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSPCAG00000005129	SF3B2	57	99.561	ENSPVAG00000005466	-	84	99.561	Pteropus_vampyrus
ENSPCAG00000005129	SF3B2	80	73.648	ENSPNYG00000023594	sf3b2	92	73.764	Pundamilia_nyererei
ENSPCAG00000005129	SF3B2	86	70.976	ENSPNAG00000001891	sf3b2	86	71.301	Pygocentrus_nattereri
ENSPCAG00000005129	SF3B2	100	94.989	ENSRNOG00000020412	Sf3b2	100	94.989	Rattus_norvegicus
ENSPCAG00000005129	SF3B2	100	97.216	ENSRBIG00000034065	SF3B2	100	97.216	Rhinopithecus_bieti
ENSPCAG00000005129	SF3B2	100	97.216	ENSRROG00000034496	SF3B2	100	97.216	Rhinopithecus_roxellana
ENSPCAG00000005129	SF3B2	100	93.179	ENSSBOG00000026337	SF3B2	100	93.179	Saimiri_boliviensis_boliviensis
ENSPCAG00000005129	SF3B2	96	68.156	ENSSHAG00000018043	-	100	68.463	Sarcophilus_harrisii
ENSPCAG00000005129	SF3B2	85	86.518	ENSSHAG00000010933	-	100	83.907	Sarcophilus_harrisii
ENSPCAG00000005129	SF3B2	97	68.785	ENSSFOG00015021125	sf3b2	86	74.389	Scleropages_formosus
ENSPCAG00000005129	SF3B2	84	75.229	ENSSMAG00000004079	sf3b2	88	75.359	Scophthalmus_maximus
ENSPCAG00000005129	SF3B2	59	87.476	ENSSDUG00000008499	sf3b2	85	71.503	Seriola_dumerili
ENSPCAG00000005129	SF3B2	59	88.235	ENSSLDG00000006838	sf3b2	86	74.968	Seriola_lalandi_dorsalis
ENSPCAG00000005129	SF3B2	68	99.206	ENSSARG00000003707	-	68	99.206	Sorex_araneus
ENSPCAG00000005129	SF3B2	100	79.444	ENSSPUG00000009198	SF3B2	85	83.858	Sphenodon_punctatus
ENSPCAG00000005129	SF3B2	97	67.738	ENSSPAG00000004406	sf3b2	86	74.936	Stegastes_partitus
ENSPCAG00000005129	SF3B2	100	97.207	ENSSSCG00000012957	SF3B2	100	97.207	Sus_scrofa
ENSPCAG00000005129	SF3B2	86	64.083	ENSTRUG00000007611	sf3b2	88	71.451	Takifugu_rubripes
ENSPCAG00000005129	SF3B2	86	68.846	ENSTNIG00000007441	sf3b2	85	71.063	Tetraodon_nigroviridis
ENSPCAG00000005129	SF3B2	89	91.860	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSPCAG00000005129	SF3B2	100	97.207	ENSTTRG00000014339	SF3B2	100	97.207	Tursiops_truncatus
ENSPCAG00000005129	SF3B2	100	95.759	ENSUAMG00000020754	SF3B2	99	97.059	Ursus_americanus
ENSPCAG00000005129	SF3B2	100	97.765	ENSUMAG00000010994	SF3B2	100	97.765	Ursus_maritimus
ENSPCAG00000005129	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	72	99.153	Vicugna_pacos
ENSPCAG00000005129	SF3B2	100	97.542	ENSVVUG00000027029	SF3B2	100	97.542	Vulpes_vulpes
ENSPCAG00000005129	SF3B2	87	69.365	ENSXETG00000008422	sf3b2	87	78.102	Xenopus_tropicalis
ENSPCAG00000005129	SF3B2	70	78.413	ENSXCOG00000008943	sf3b2	84	78.095	Xiphophorus_couchianus
ENSPCAG00000005129	SF3B2	59	87.547	ENSXMAG00000008467	sf3b2	86	71.263	Xiphophorus_maculatus