EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000005270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 1759 bases
Position: chrscaffold_7402:39304-41062
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	1	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	2	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	3	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	4	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	5	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	6	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	7	8
ENSPCAP00000004937	zf-C2H2	PF00096.26	2.6e-45	8	8
ENSPCAP00000004937	zf-met	PF12874.7	0.00022	1	2
ENSPCAP00000004937	zf-met	PF12874.7	0.00022	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005270	-	1668	-	ENSPCAP00000004937	556 (aa)	-	UPI00018AE664

Gene Model

Click here to download ENSPCAG00000005270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000005270	-	52	45.946	ENSPCAG00000011934	SNAI1	52	45.946
ENSPCAG00000005270	-	98	56.126	ENSPCAG00000007561	ZFP1	82	56.126
ENSPCAG00000005270	-	97	43.448	ENSPCAG00000005203	ZNF235	65	43.448
ENSPCAG00000005270	-	91	32.753	ENSPCAG00000016959	ZNF526	80	32.226
ENSPCAG00000005270	-	97	44.818	ENSPCAG00000001613	-	76	44.818
ENSPCAG00000005270	-	95	51.293	ENSPCAG00000015262	ZFP69B	63	51.293
ENSPCAG00000005270	-	93	51.656	ENSPCAG00000000878	ZNF582	63	51.656
ENSPCAG00000005270	-	99	55.328	ENSPCAG00000016939	ZNF2	69	55.328
ENSPCAG00000005270	-	85	47.264	ENSPCAG00000007544	GZF1	54	47.264
ENSPCAG00000005270	-	97	44.390	ENSPCAG00000008589	ZNF628	79	43.404
ENSPCAG00000005270	-	92	50.694	ENSPCAG00000007476	-	97	47.531
ENSPCAG00000005270	-	53	39.259	ENSPCAG00000001788	-	58	39.259
ENSPCAG00000005270	-	97	39.099	ENSPCAG00000000862	-	86	39.099
ENSPCAG00000005270	-	80	34.024	ENSPCAG00000011671	PRDM5	68	32.248
ENSPCAG00000005270	-	98	47.091	ENSPCAG00000009106	-	86	47.091
ENSPCAG00000005270	-	97	41.995	ENSPCAG00000004217	-	90	43.095
ENSPCAG00000005270	-	95	43.074	ENSPCAG00000012543	ZNF234	82	40.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005270	-	97	52.632	ENSAPOG00000006303	-	96	52.632	Acanthochromis_polyacanthus
ENSPCAG00000005270	-	92	43.011	ENSAPOG00000019960	-	93	38.066	Acanthochromis_polyacanthus
ENSPCAG00000005270	-	97	51.389	ENSAPOG00000008802	-	99	51.389	Acanthochromis_polyacanthus
ENSPCAG00000005270	-	97	51.208	ENSACIG00000004745	-	95	51.208	Amphilophus_citrinellus
ENSPCAG00000005270	-	96	54.194	ENSACIG00000022658	-	90	52.016	Amphilophus_citrinellus
ENSPCAG00000005270	-	97	46.429	ENSAOCG00000013710	-	87	46.429	Amphiprion_ocellaris
ENSPCAG00000005270	-	97	49.699	ENSAOCG00000013130	-	78	49.699	Amphiprion_ocellaris
ENSPCAG00000005270	-	97	49.455	ENSAOCG00000014165	-	89	48.352	Amphiprion_ocellaris
ENSPCAG00000005270	-	99	48.936	ENSAPEG00000006650	-	93	50.000	Amphiprion_percula
ENSPCAG00000005270	-	98	49.699	ENSAPEG00000009383	-	79	50.439	Amphiprion_percula
ENSPCAG00000005270	-	97	48.765	ENSATEG00000015695	-	89	50.926	Anabas_testudineus
ENSPCAG00000005270	-	97	48.765	ENSATEG00000017618	-	89	50.926	Anabas_testudineus
ENSPCAG00000005270	-	91	44.086	ENSACLG00000019291	-	90	44.086	Astatotilapia_calliptera
ENSPCAG00000005270	-	97	51.376	ENSACLG00000021343	-	95	51.376	Astatotilapia_calliptera
ENSPCAG00000005270	-	97	51.596	ENSACLG00000023513	-	84	50.847	Astatotilapia_calliptera
ENSPCAG00000005270	-	97	48.221	ENSACLG00000018746	-	91	38.956	Astatotilapia_calliptera
ENSPCAG00000005270	-	98	48.387	ENSACLG00000026703	-	71	46.154	Astatotilapia_calliptera
ENSPCAG00000005270	-	97	55.411	ENSAMXG00000035920	-	92	55.411	Astyanax_mexicanus
ENSPCAG00000005270	-	96	54.730	ENSAMXG00000041975	-	83	54.730	Astyanax_mexicanus
ENSPCAG00000005270	-	97	48.611	ENSAMXG00000042275	-	89	48.611	Astyanax_mexicanus
ENSPCAG00000005270	-	91	51.327	ENSAMXG00000043302	-	92	51.327	Astyanax_mexicanus
ENSPCAG00000005270	-	97	50.427	ENSAMXG00000039408	-	94	50.427	Astyanax_mexicanus
ENSPCAG00000005270	-	98	50.273	ENSBTAG00000016191	ZNF32	78	50.273	Bos_taurus
ENSPCAG00000005270	-	98	50.273	ENSCHIG00000021099	ZNF32	78	50.273	Capra_hircus
ENSPCAG00000005270	-	96	43.354	ENSCSAVG00000001808	-	100	43.354	Ciona_savignyi
ENSPCAG00000005270	-	96	45.106	ENSCVAG00000021225	-	96	53.448	Cyprinodon_variegatus
ENSPCAG00000005270	-	97	48.410	ENSDARG00000099986	si:ch211-207i20.2	62	48.410	Danio_rerio
ENSPCAG00000005270	-	98	50.286	ENSDNOG00000035046	ZNF32	78	50.286	Dasypus_novemcinctus
ENSPCAG00000005270	-	98	50.273	ENSEASG00005006910	ZNF32	78	50.273	Equus_asinus_asinus
ENSPCAG00000005270	-	98	50.273	ENSECAG00000023676	ZNF32	78	50.273	Equus_caballus
ENSPCAG00000005270	-	84	39.474	ENSELUG00000021229	-	88	41.956	Esox_lucius
ENSPCAG00000005270	-	97	50.698	ENSFHEG00000000678	-	69	50.698	Fundulus_heteroclitus
ENSPCAG00000005270	-	97	49.603	ENSFHEG00000018063	-	89	46.953	Fundulus_heteroclitus
ENSPCAG00000005270	-	93	42.813	ENSGAFG00000020499	-	64	42.813	Gambusia_affinis
ENSPCAG00000005270	-	96	43.878	ENSGACG00000010352	si:ch211-207i20.2	62	43.878	Gasterosteus_aculeatus
ENSPCAG00000005270	-	97	48.243	ENSHBUG00000015166	-	87	48.243	Haplochromis_burtoni
ENSPCAG00000005270	-	97	53.498	ENSHBUG00000021003	-	97	53.498	Haplochromis_burtoni
ENSPCAG00000005270	-	98	39.322	ENSHBUG00000013296	-	98	38.621	Haplochromis_burtoni
ENSPCAG00000005270	-	98	51.471	ENSIPUG00000022741	-	82	53.357	Ictalurus_punctatus
ENSPCAG00000005270	-	93	51.653	ENSIPUG00000023761	-	61	51.653	Ictalurus_punctatus
ENSPCAG00000005270	-	96	53.846	ENSIPUG00000005733	-	67	53.846	Ictalurus_punctatus
ENSPCAG00000005270	-	96	53.846	ENSIPUG00000002655	-	100	54.023	Ictalurus_punctatus
ENSPCAG00000005270	-	96	52.632	ENSIPUG00000021998	-	91	52.245	Ictalurus_punctatus
ENSPCAG00000005270	-	96	50.000	ENSLBEG00000020128	-	98	50.000	Labrus_bergylta
ENSPCAG00000005270	-	86	35.398	ENSMAMG00000014734	-	53	35.398	Mastacembelus_armatus
ENSPCAG00000005270	-	99	49.237	ENSMZEG00005019918	-	93	50.000	Maylandia_zebra
ENSPCAG00000005270	-	97	48.221	ENSMZEG00005003336	-	85	44.838	Maylandia_zebra
ENSPCAG00000005270	-	94	37.805	ENSMZEG00005014592	-	90	39.661	Maylandia_zebra
ENSPCAG00000005270	-	97	53.952	ENSMZEG00005021052	-	74	53.952	Maylandia_zebra
ENSPCAG00000005270	-	89	41.772	ENSMZEG00005012715	-	75	41.772	Maylandia_zebra
ENSPCAG00000005270	-	96	51.145	ENSMZEG00005007262	-	99	48.763	Maylandia_zebra
ENSPCAG00000005270	-	77	41.801	ENSMZEG00005020162	-	85	41.801	Maylandia_zebra
ENSPCAG00000005270	-	97	37.533	ENSMZEG00005020156	-	82	37.533	Maylandia_zebra
ENSPCAG00000005270	-	98	50.853	ENSMZEG00005025343	-	78	50.853	Maylandia_zebra
ENSPCAG00000005270	-	83	51.295	ENSMZEG00005026082	-	72	51.295	Maylandia_zebra
ENSPCAG00000005270	-	97	48.106	ENSMMOG00000004460	-	87	47.387	Mola_mola
ENSPCAG00000005270	-	90	46.923	ENSMMOG00000006131	-	87	45.679	Mola_mola
ENSPCAG00000005270	-	97	54.187	ENSMMOG00000010703	-	92	54.187	Mola_mola
ENSPCAG00000005270	-	98	48.291	ENSMALG00000007051	-	98	49.275	Monopterus_albus
ENSPCAG00000005270	-	97	50.355	ENSMALG00000015655	-	99	49.123	Monopterus_albus
ENSPCAG00000005270	-	93	46.809	ENSMALG00000004216	-	65	46.809	Monopterus_albus
ENSPCAG00000005270	-	98	50.820	MGP_PahariEiJ_G0022533	Zfp637	85	55.172	Mus_pahari
ENSPCAG00000005270	-	98	50.820	MGP_SPRETEiJ_G0029809	Zfp637	85	55.172	Mus_spretus
ENSPCAG00000005270	-	98	51.309	ENSNGAG00000020281	Zfp637	86	51.309	Nannospalax_galili
ENSPCAG00000005270	-	94	42.857	ENSNBRG00000005849	-	89	46.364	Neolamprologus_brichardi
ENSPCAG00000005270	-	94	34.048	ENSNBRG00000016564	-	82	31.778	Neolamprologus_brichardi
ENSPCAG00000005270	-	97	44.811	ENSNBRG00000000523	-	66	44.811	Neolamprologus_brichardi
ENSPCAG00000005270	-	97	41.637	ENSNBRG00000005805	-	94	41.637	Neolamprologus_brichardi
ENSPCAG00000005270	-	98	50.206	ENSNBRG00000003000	-	81	47.917	Neolamprologus_brichardi
ENSPCAG00000005270	-	93	41.722	ENSNBRG00000005796	-	96	42.000	Neolamprologus_brichardi
ENSPCAG00000005270	-	96	39.815	ENSONIG00000005693	-	99	39.815	Oreochromis_niloticus
ENSPCAG00000005270	-	92	36.597	ENSONIG00000015514	-	84	36.597	Oreochromis_niloticus
ENSPCAG00000005270	-	92	42.424	ENSONIG00000015552	-	95	42.424	Oreochromis_niloticus
ENSPCAG00000005270	-	98	51.852	ENSOARG00000002999	ZNF32	79	51.852	Ovis_aries
ENSPCAG00000005270	-	98	43.003	ENSPLAG00000015973	-	100	43.003	Poecilia_latipinna
ENSPCAG00000005270	-	98	48.214	ENSPMEG00000016458	-	97	42.049	Poecilia_mexicana
ENSPCAG00000005270	-	97	45.562	ENSPMEG00000006726	-	93	42.492	Poecilia_mexicana
ENSPCAG00000005270	-	97	48.366	ENSPREG00000010437	-	89	51.613	Poecilia_reticulata
ENSPCAG00000005270	-	99	54.937	ENSPVAG00000009430	-	87	54.937	Pteropus_vampyrus
ENSPCAG00000005270	-	97	51.325	ENSPNYG00000002684	-	99	44.416	Pundamilia_nyererei
ENSPCAG00000005270	-	96	47.137	ENSPNYG00000007597	-	84	45.306	Pundamilia_nyererei
ENSPCAG00000005270	-	92	52.683	ENSPNAG00000029997	-	96	51.923	Pygocentrus_nattereri
ENSPCAG00000005270	-	99	39.503	ENSSFOG00015015878	-	98	41.975	Scleropages_formosus
ENSPCAG00000005270	-	98	46.749	ENSSDUG00000015182	-	73	46.749	Seriola_dumerili
ENSPCAG00000005270	-	97	44.377	ENSSDUG00000015159	-	87	44.377	Seriola_dumerili
ENSPCAG00000005270	-	98	47.419	ENSSDUG00000008943	-	99	45.636	Seriola_dumerili
ENSPCAG00000005270	-	90	47.134	ENSSDUG00000015254	-	95	47.134	Seriola_dumerili
ENSPCAG00000005270	-	91	49.045	ENSSLDG00000012036	-	96	49.045	Seriola_lalandi_dorsalis
ENSPCAG00000005270	-	91	48.649	ENSSLDG00000018273	-	88	48.649	Seriola_lalandi_dorsalis
ENSPCAG00000005270	-	98	47.619	ENSSLDG00000020675	-	99	40.530	Seriola_lalandi_dorsalis
ENSPCAG00000005270	-	96	41.212	ENSSARG00000000532	-	85	44.056	Sorex_araneus
ENSPCAG00000005270	-	97	49.012	ENSXCOG00000008116	-	99	44.179	Xiphophorus_couchianus