EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000005308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 603 bases
Position: chrscaffold_50785:7021-7623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000004908	RRM_5	PF13893.6	1.5e-06	1	1
ENSPCAP00000004908	RRM_1	PF00076.22	4.2e-43	1	2
ENSPCAP00000004908	RRM_1	PF00076.22	4.2e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005239	-	603	-	ENSPCAP00000004908	200 (aa)	-	UPI00018AD378

Gene Model

Click here to download ENSPCAG00000005308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000005308	-	79	32.203	ENSPCAG00000003192	TIAL1	74	32.203
ENSPCAG00000005308	-	85	32.743	ENSPCAG00000016012	ELAVL1	100	32.743
ENSPCAG00000005308	-	98	59.896	ENSPCAG00000015577	PABPC5	93	60.204
ENSPCAG00000005308	-	86	35.714	ENSPCAG00000008368	-	66	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005308	-	100	98.500	ENSG00000184388	PABPC1L2B	100	98.500	Homo_sapiens
ENSPCAG00000005308	-	100	98.500	ENSG00000186288	PABPC1L2A	100	98.500	Homo_sapiens
ENSPCAG00000005308	-	98	79.592	ENSAPOG00000017776	pabpc1b	61	79.592	Acanthochromis_polyacanthus
ENSPCAG00000005308	-	98	80.102	ENSAPOG00000015105	pabpc1a	59	80.102	Acanthochromis_polyacanthus
ENSPCAG00000005308	-	100	99.000	ENSAMEG00000019441	-	100	99.000	Ailuropoda_melanoleuca
ENSPCAG00000005308	-	98	80.102	ENSACIG00000004685	pabpc1a	59	80.102	Amphilophus_citrinellus
ENSPCAG00000005308	-	98	78.571	ENSACIG00000018366	pabpc1b	60	78.571	Amphilophus_citrinellus
ENSPCAG00000005308	-	98	80.102	ENSAOCG00000011656	pabpc1a	59	80.102	Amphiprion_ocellaris
ENSPCAG00000005308	-	98	80.102	ENSAOCG00000019839	pabpc1b	59	80.102	Amphiprion_ocellaris
ENSPCAG00000005308	-	98	80.102	ENSAPEG00000006963	pabpc1a	59	80.102	Amphiprion_percula
ENSPCAG00000005308	-	98	80.102	ENSAPEG00000010435	pabpc1b	59	80.102	Amphiprion_percula
ENSPCAG00000005308	-	98	80.102	ENSATEG00000024852	pabpc1a	59	80.102	Anabas_testudineus
ENSPCAG00000005308	-	98	79.082	ENSATEG00000012917	pabpc1b	59	79.082	Anabas_testudineus
ENSPCAG00000005308	-	100	98.500	ENSANAG00000019429	-	100	98.500	Aotus_nancymaae
ENSPCAG00000005308	-	100	98.500	ENSANAG00000019431	-	100	98.500	Aotus_nancymaae
ENSPCAG00000005308	-	98	80.102	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSPCAG00000005308	-	98	78.061	ENSACLG00000014335	pabpc1b	59	78.061	Astatotilapia_calliptera
ENSPCAG00000005308	-	98	79.592	ENSAMXG00000008599	pabpc1b	59	79.592	Astyanax_mexicanus
ENSPCAG00000005308	-	100	98.000	ENSBTAG00000050902	-	95	98.000	Bos_taurus
ENSPCAG00000005308	-	100	98.500	ENSBTAG00000052491	-	94	98.500	Bos_taurus
ENSPCAG00000005308	-	100	98.500	ENSCJAG00000041326	-	100	98.500	Callithrix_jacchus
ENSPCAG00000005308	-	100	99.000	ENSCAFG00020002052	-	96	99.000	Canis_lupus_dingo
ENSPCAG00000005308	-	100	98.500	ENSCHIG00000006283	-	100	98.500	Capra_hircus
ENSPCAG00000005308	-	100	99.000	ENSCHIG00000011138	-	100	99.000	Capra_hircus
ENSPCAG00000005308	-	100	99.000	ENSTSYG00000001775	-	100	99.000	Carlito_syrichta
ENSPCAG00000005308	-	100	98.500	ENSCPOG00000009525	-	100	98.500	Cavia_porcellus
ENSPCAG00000005308	-	100	98.500	ENSCCAG00000031524	-	100	98.500	Cebus_capucinus
ENSPCAG00000005308	-	100	98.500	ENSCATG00000042826	-	100	98.500	Cercocebus_atys
ENSPCAG00000005308	-	100	98.500	ENSCATG00000043125	-	100	98.500	Cercocebus_atys
ENSPCAG00000005308	-	100	95.000	ENSCLAG00000017409	-	100	95.000	Chinchilla_lanigera
ENSPCAG00000005308	-	100	95.000	ENSCLAG00000017412	-	100	95.000	Chinchilla_lanigera
ENSPCAG00000005308	-	100	98.500	ENSCSAG00000000102	-	100	98.500	Chlorocebus_sabaeus
ENSPCAG00000005308	-	99	91.960	ENSCGRG00001023387	-	98	91.960	Cricetulus_griseus_chok1gshd
ENSPCAG00000005308	-	98	79.082	ENSCSEG00000015241	-	59	79.082	Cynoglossus_semilaevis
ENSPCAG00000005308	-	98	80.102	ENSCSEG00000013324	pabpc1a	59	80.102	Cynoglossus_semilaevis
ENSPCAG00000005308	-	98	79.592	ENSCVAG00000005489	pabpc1b	59	79.592	Cyprinodon_variegatus
ENSPCAG00000005308	-	98	80.102	ENSCVAG00000021872	pabpc1a	59	80.102	Cyprinodon_variegatus
ENSPCAG00000005308	-	98	79.082	ENSDARG00000021140	pabpc1b	92	86.885	Danio_rerio
ENSPCAG00000005308	-	98	79.592	ENSDARG00000017219	pabpc1a	59	79.592	Danio_rerio
ENSPCAG00000005308	-	100	96.500	ENSDNOG00000030926	-	100	96.500	Dasypus_novemcinctus
ENSPCAG00000005308	-	100	96.000	ENSDORG00000011362	-	100	96.000	Dipodomys_ordii
ENSPCAG00000005308	-	100	98.500	ENSEASG00005010399	-	95	98.500	Equus_asinus_asinus
ENSPCAG00000005308	-	100	98.500	ENSECAG00000002620	-	95	98.500	Equus_caballus
ENSPCAG00000005308	-	100	94.000	ENSEEUG00000008203	-	100	94.000	Erinaceus_europaeus
ENSPCAG00000005308	-	93	56.150	ENSELUG00000005389	-	78	56.150	Esox_lucius
ENSPCAG00000005308	-	98	80.102	ENSELUG00000015062	-	59	80.102	Esox_lucius
ENSPCAG00000005308	-	98	79.592	ENSELUG00000003614	pabpc1a	60	79.592	Esox_lucius
ENSPCAG00000005308	-	100	99.000	ENSFCAG00000039701	-	100	99.000	Felis_catus
ENSPCAG00000005308	-	100	98.500	ENSFDAG00000005484	-	100	98.500	Fukomys_damarensis
ENSPCAG00000005308	-	98	80.102	ENSFHEG00000018979	pabpc1a	59	80.102	Fundulus_heteroclitus
ENSPCAG00000005308	-	98	79.082	ENSFHEG00000008186	pabpc1b	59	79.082	Fundulus_heteroclitus
ENSPCAG00000005308	-	98	79.592	ENSGMOG00000002448	-	59	79.592	Gadus_morhua
ENSPCAG00000005308	-	98	79.592	ENSGMOG00000013448	pabpc1a	58	79.592	Gadus_morhua
ENSPCAG00000005308	-	98	79.592	ENSGAFG00000010193	pabpc1b	62	79.592	Gambusia_affinis
ENSPCAG00000005308	-	98	80.102	ENSGAFG00000019750	pabpc1a	62	80.102	Gambusia_affinis
ENSPCAG00000005308	-	98	80.612	ENSGACG00000003771	pabpc1b	65	80.612	Gasterosteus_aculeatus
ENSPCAG00000005308	-	98	80.102	ENSGACG00000003572	pabpc1a	59	80.102	Gasterosteus_aculeatus
ENSPCAG00000005308	-	100	98.500	ENSGGOG00000038606	-	100	98.500	Gorilla_gorilla
ENSPCAG00000005308	-	100	98.500	ENSGGOG00000043933	-	100	98.500	Gorilla_gorilla
ENSPCAG00000005308	-	98	80.102	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSPCAG00000005308	-	98	78.061	ENSHBUG00000002075	pabpc1b	61	78.061	Haplochromis_burtoni
ENSPCAG00000005308	-	100	96.500	ENSHGLG00000019762	-	100	96.500	Heterocephalus_glaber_female
ENSPCAG00000005308	-	100	96.500	ENSHGLG00000019668	-	100	96.500	Heterocephalus_glaber_female
ENSPCAG00000005308	-	100	96.500	ENSHGLG00100020854	-	100	96.500	Heterocephalus_glaber_male
ENSPCAG00000005308	-	98	80.102	ENSHCOG00000013502	pabpc1a	59	80.102	Hippocampus_comes
ENSPCAG00000005308	-	95	68.783	ENSHCOG00000003175	pabpc1b	69	67.500	Hippocampus_comes
ENSPCAG00000005308	-	98	60.309	ENSIPUG00000021244	-	52	60.309	Ictalurus_punctatus
ENSPCAG00000005308	-	98	79.592	ENSIPUG00000008848	pabpc1a	60	79.592	Ictalurus_punctatus
ENSPCAG00000005308	-	98	79.592	ENSIPUG00000010791	-	63	79.592	Ictalurus_punctatus
ENSPCAG00000005308	-	100	98.000	ENSSTOG00000022096	-	100	98.000	Ictidomys_tridecemlineatus
ENSPCAG00000005308	-	100	98.000	ENSSTOG00000026028	-	100	98.000	Ictidomys_tridecemlineatus
ENSPCAG00000005308	-	100	96.500	ENSJJAG00000007037	-	100	96.500	Jaculus_jaculus
ENSPCAG00000005308	-	98	79.082	ENSKMAG00000008049	pabpc1b	64	79.082	Kryptolebias_marmoratus
ENSPCAG00000005308	-	98	80.102	ENSKMAG00000000605	pabpc1a	59	80.102	Kryptolebias_marmoratus
ENSPCAG00000005308	-	98	80.102	ENSLBEG00000024002	-	59	80.102	Labrus_bergylta
ENSPCAG00000005308	-	98	80.102	ENSLBEG00000026845	pabpc1b	59	80.102	Labrus_bergylta
ENSPCAG00000005308	-	99	97.487	ENSLAFG00000023096	-	99	97.487	Loxodonta_africana
ENSPCAG00000005308	-	100	98.010	ENSMFAG00000028878	-	100	98.010	Macaca_fascicularis
ENSPCAG00000005308	-	100	98.500	ENSMMUG00000039929	-	100	98.500	Macaca_mulatta
ENSPCAG00000005308	-	100	98.500	ENSMMUG00000009740	-	100	98.500	Macaca_mulatta
ENSPCAG00000005308	-	100	98.500	ENSMMUG00000037681	-	100	98.500	Macaca_mulatta
ENSPCAG00000005308	-	100	98.500	ENSMNEG00000037732	-	100	98.500	Macaca_nemestrina
ENSPCAG00000005308	-	100	98.500	ENSMLEG00000027495	-	100	98.500	Mandrillus_leucophaeus
ENSPCAG00000005308	-	98	79.082	ENSMAMG00000014610	pabpc1b	60	79.082	Mastacembelus_armatus
ENSPCAG00000005308	-	98	80.102	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSPCAG00000005308	-	98	80.102	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSPCAG00000005308	-	98	78.061	ENSMZEG00005026745	pabpc1b	59	78.061	Maylandia_zebra
ENSPCAG00000005308	-	100	98.500	ENSMICG00000047642	-	100	98.500	Microcebus_murinus
ENSPCAG00000005308	-	98	80.102	ENSMMOG00000018009	pabpc1b	63	80.102	Mola_mola
ENSPCAG00000005308	-	98	80.102	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSPCAG00000005308	-	98	73.980	ENSMODG00000013156	-	58	73.980	Monodelphis_domestica
ENSPCAG00000005308	-	98	67.179	ENSMODG00000015024	-	57	67.179	Monodelphis_domestica
ENSPCAG00000005308	-	98	80.102	ENSMALG00000013020	-	64	80.102	Monopterus_albus
ENSPCAG00000005308	-	98	79.082	ENSMALG00000006066	pabpc1b	64	79.082	Monopterus_albus
ENSPCAG00000005308	-	100	96.000	ENSNGAG00000012688	-	100	96.000	Nannospalax_galili
ENSPCAG00000005308	-	98	80.102	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSPCAG00000005308	-	98	78.061	ENSNBRG00000013737	pabpc1b	63	78.061	Neolamprologus_brichardi
ENSPCAG00000005308	-	100	98.500	ENSNLEG00000018128	-	100	98.500	Nomascus_leucogenys
ENSPCAG00000005308	-	100	96.000	ENSODEG00000018540	-	100	96.000	Octodon_degus
ENSPCAG00000005308	-	98	78.061	ENSONIG00000002717	pabpc1b	59	78.061	Oreochromis_niloticus
ENSPCAG00000005308	-	98	80.102	ENSONIG00000006871	-	59	80.102	Oreochromis_niloticus
ENSPCAG00000005308	-	100	99.000	ENSOCUG00000002565	-	100	99.000	Oryctolagus_cuniculus
ENSPCAG00000005308	-	98	80.102	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSPCAG00000005308	-	98	77.041	ENSORLG00000003008	-	58	77.041	Oryzias_latipes
ENSPCAG00000005308	-	98	80.102	ENSORLG00020022398	pabpc1a	59	80.102	Oryzias_latipes_hni
ENSPCAG00000005308	-	98	77.041	ENSORLG00020022259	-	59	77.041	Oryzias_latipes_hni
ENSPCAG00000005308	-	98	77.041	ENSORLG00015010932	-	59	77.041	Oryzias_latipes_hsok
ENSPCAG00000005308	-	98	80.102	ENSORLG00015013633	pabpc1	59	80.102	Oryzias_latipes_hsok
ENSPCAG00000005308	-	98	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSPCAG00000005308	-	98	80.102	ENSOMEG00000020219	pabpc1a	59	80.102	Oryzias_melastigma
ENSPCAG00000005308	-	100	98.500	ENSOGAG00000026047	-	100	98.500	Otolemur_garnettii
ENSPCAG00000005308	-	100	98.500	ENSOGAG00000029513	-	100	98.500	Otolemur_garnettii
ENSPCAG00000005308	-	100	98.500	ENSOARG00000005943	-	100	98.500	Ovis_aries
ENSPCAG00000005308	-	100	98.500	ENSPPAG00000012920	-	100	98.500	Pan_paniscus
ENSPCAG00000005308	-	100	99.000	ENSPPRG00000011804	-	100	99.000	Panthera_pardus
ENSPCAG00000005308	-	100	99.000	ENSPPRG00000011809	-	100	99.000	Panthera_pardus
ENSPCAG00000005308	-	100	98.500	ENSPTRG00000028252	-	100	98.500	Pan_troglodytes
ENSPCAG00000005308	-	100	98.500	ENSPANG00000011549	-	100	98.500	Papio_anubis
ENSPCAG00000005308	-	98	79.592	ENSPKIG00000005676	pabpc1b	59	79.592	Paramormyrops_kingsleyae
ENSPCAG00000005308	-	98	79.082	ENSPMGG00000022487	pabpc1a	77	79.082	Periophthalmus_magnuspinnatus
ENSPCAG00000005308	-	98	79.592	ENSPMGG00000023134	-	81	79.592	Periophthalmus_magnuspinnatus
ENSPCAG00000005308	-	98	79.082	ENSPFOG00000005917	pabpc1b	59	79.082	Poecilia_formosa
ENSPCAG00000005308	-	98	80.102	ENSPFOG00000010815	pabpc1a	58	80.102	Poecilia_formosa
ENSPCAG00000005308	-	98	79.592	ENSPLAG00000001388	pabpc1b	59	79.592	Poecilia_latipinna
ENSPCAG00000005308	-	98	80.102	ENSPLAG00000004114	pabpc1a	59	80.102	Poecilia_latipinna
ENSPCAG00000005308	-	98	79.082	ENSPMEG00000014399	pabpc1b	59	79.082	Poecilia_mexicana
ENSPCAG00000005308	-	98	80.102	ENSPMEG00000001334	pabpc1a	59	80.102	Poecilia_mexicana
ENSPCAG00000005308	-	98	79.592	ENSPREG00000010911	pabpc1b	62	79.592	Poecilia_reticulata
ENSPCAG00000005308	-	98	80.102	ENSPREG00000019595	pabpc1a	92	86.885	Poecilia_reticulata
ENSPCAG00000005308	-	100	98.500	ENSPPYG00000020468	-	100	98.500	Pongo_abelii
ENSPCAG00000005308	-	100	98.000	ENSPCOG00000026349	-	100	98.000	Propithecus_coquereli
ENSPCAG00000005308	-	100	95.000	ENSPVAG00000016117	-	100	95.000	Pteropus_vampyrus
ENSPCAG00000005308	-	98	80.102	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSPCAG00000005308	-	98	78.061	ENSPNYG00000012578	pabpc1b	61	78.061	Pundamilia_nyererei
ENSPCAG00000005308	-	98	78.571	ENSPNAG00000028408	pabpc1a	65	78.571	Pygocentrus_nattereri
ENSPCAG00000005308	-	98	80.102	ENSPNAG00000024626	pabpc1b	58	80.102	Pygocentrus_nattereri
ENSPCAG00000005308	-	99	78.680	ENSRBIG00000028738	-	69	78.680	Rhinopithecus_bieti
ENSPCAG00000005308	-	100	98.500	ENSRBIG00000027173	-	100	98.500	Rhinopithecus_bieti
ENSPCAG00000005308	-	100	98.500	ENSRROG00000017404	-	100	98.500	Rhinopithecus_roxellana
ENSPCAG00000005308	-	98	69.388	ENSSHAG00000000511	-	59	69.388	Sarcophilus_harrisii
ENSPCAG00000005308	-	87	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSPCAG00000005308	-	98	80.102	ENSSFOG00015002752	-	59	80.102	Scleropages_formosus
ENSPCAG00000005308	-	98	80.102	ENSSFOG00015006662	pabpc1a	59	80.102	Scleropages_formosus
ENSPCAG00000005308	-	98	79.082	ENSSMAG00000006869	pabpc1b	59	79.082	Scophthalmus_maximus
ENSPCAG00000005308	-	98	80.102	ENSSMAG00000010803	pabpc1a	60	80.102	Scophthalmus_maximus
ENSPCAG00000005308	-	98	79.592	ENSSDUG00000011965	pabpc1b	59	79.592	Seriola_dumerili
ENSPCAG00000005308	-	98	80.102	ENSSDUG00000006675	pabpc1a	59	80.102	Seriola_dumerili
ENSPCAG00000005308	-	98	80.102	ENSSLDG00000011661	pabpc1a	59	80.102	Seriola_lalandi_dorsalis
ENSPCAG00000005308	-	98	79.592	ENSSLDG00000014156	pabpc1b	60	79.592	Seriola_lalandi_dorsalis
ENSPCAG00000005308	-	98	79.592	ENSSPAG00000019265	pabpc1b	65	79.592	Stegastes_partitus
ENSPCAG00000005308	-	98	80.102	ENSSPAG00000014453	-	59	80.102	Stegastes_partitus
ENSPCAG00000005308	-	100	99.000	ENSSSCG00000036336	-	100	99.000	Sus_scrofa
ENSPCAG00000005308	-	100	99.000	ENSSSCG00000032167	-	100	99.000	Sus_scrofa
ENSPCAG00000005308	-	98	80.102	ENSTRUG00000011577	-	59	80.102	Takifugu_rubripes
ENSPCAG00000005308	-	98	80.102	ENSTRUG00000003767	-	60	80.102	Takifugu_rubripes
ENSPCAG00000005308	-	98	75.743	ENSTNIG00000013307	pabpc1a	58	75.743	Tetraodon_nigroviridis
ENSPCAG00000005308	-	98	80.612	ENSTNIG00000009153	pabpc1b	59	80.612	Tetraodon_nigroviridis
ENSPCAG00000005308	-	100	99.000	ENSTTRG00000013181	-	100	99.000	Tursiops_truncatus
ENSPCAG00000005308	-	100	99.000	ENSUAMG00000008089	-	100	99.000	Ursus_americanus
ENSPCAG00000005308	-	100	56.853	ENSUMAG00000023926	-	88	56.853	Ursus_maritimus
ENSPCAG00000005308	-	100	99.000	ENSUMAG00000003364	-	100	99.000	Ursus_maritimus
ENSPCAG00000005308	-	100	98.500	ENSVVUG00000015892	-	97	98.500	Vulpes_vulpes
ENSPCAG00000005308	-	98	79.592	ENSXCOG00000019901	pabpc1b	62	79.592	Xiphophorus_couchianus
ENSPCAG00000005308	-	98	80.102	ENSXCOG00000017066	pabpc1a	63	80.102	Xiphophorus_couchianus
ENSPCAG00000005308	-	98	79.592	ENSXMAG00000003753	pabpc1b	89	79.592	Xiphophorus_maculatus
ENSPCAG00000005308	-	98	80.102	ENSXMAG00000002555	pabpc1a	62	80.102	Xiphophorus_maculatus