EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000005511 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 25796 bases
Position: chrGeneScaffold_305:22781-48576
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005220	MMR_HSR1	PF01926.23	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005588	LSG1-201	1971	-	ENSPCAP00000005220	656 (aa)	-	UPI00018AE867

Gene Model

Click here to download ENSPCAG00000005511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005511	LSG1	90	88.000	ENSG00000041802	LSG1	90	88.000	Homo_sapiens
ENSPCAG00000005511	LSG1	76	70.667	ENSAPOG00000009694	lsg1	89	70.667	Acanthochromis_polyacanthus
ENSPCAG00000005511	LSG1	90	82.667	ENSAMEG00000009343	LSG1	90	82.667	Ailuropoda_melanoleuca
ENSPCAG00000005511	LSG1	88	77.419	ENSACIG00000012406	lsg1	89	73.333	Amphilophus_citrinellus
ENSPCAG00000005511	LSG1	75	70.667	ENSAOCG00000016066	lsg1	89	70.667	Amphiprion_ocellaris
ENSPCAG00000005511	LSG1	75	70.667	ENSAPEG00000003252	lsg1	89	70.667	Amphiprion_percula
ENSPCAG00000005511	LSG1	80	77.419	ENSATEG00000011794	lsg1	89	73.333	Anabas_testudineus
ENSPCAG00000005511	LSG1	84	85.714	ENSACAG00000004222	LSG1	89	85.714	Anolis_carolinensis
ENSPCAG00000005511	LSG1	90	88.000	ENSANAG00000021153	LSG1	90	88.000	Aotus_nancymaae
ENSPCAG00000005511	LSG1	90	72.000	ENSACLG00000000520	lsg1	90	72.000	Astatotilapia_calliptera
ENSPCAG00000005511	LSG1	90	72.000	ENSAMXG00000008271	lsg1	89	72.000	Astyanax_mexicanus
ENSPCAG00000005511	LSG1	90	85.333	ENSBTAG00000008461	LSG1	90	85.333	Bos_taurus
ENSPCAG00000005511	LSG1	51	50.000	WBGene00016907	C53H9.2	57	67.816	Caenorhabditis_elegans
ENSPCAG00000005511	LSG1	90	86.667	ENSCJAG00000013962	LSG1	90	86.667	Callithrix_jacchus
ENSPCAG00000005511	LSG1	85	95.238	ENSCAFG00000013445	LSG1	89	95.238	Canis_familiaris
ENSPCAG00000005511	LSG1	84	97.297	ENSCAFG00020002216	LSG1	89	97.297	Canis_lupus_dingo
ENSPCAG00000005511	LSG1	90	85.333	ENSCHIG00000015769	LSG1	90	85.333	Capra_hircus
ENSPCAG00000005511	LSG1	90	89.333	ENSTSYG00000001447	LSG1	90	89.333	Carlito_syrichta
ENSPCAG00000005511	LSG1	76	95.238	ENSCAPG00000009856	LSG1	89	95.238	Cavia_aperea
ENSPCAG00000005511	LSG1	90	88.000	ENSCCAG00000035744	LSG1	90	88.000	Cebus_capucinus
ENSPCAG00000005511	LSG1	90	86.667	ENSCATG00000042060	LSG1	91	86.667	Cercocebus_atys
ENSPCAG00000005511	LSG1	90	85.333	ENSCSAG00000008796	LSG1	82	85.333	Chlorocebus_sabaeus
ENSPCAG00000005511	LSG1	90	68.000	ENSCPBG00000015941	LSG1	75	68.000	Chrysemys_picta_bellii
ENSPCAG00000005511	LSG1	53	60.377	ENSCING00000007079	-	74	60.377	Ciona_intestinalis
ENSPCAG00000005511	LSG1	62	65.094	ENSCSAVG00000002514	-	80	65.094	Ciona_savignyi
ENSPCAG00000005511	LSG1	90	88.000	ENSCANG00000030709	LSG1	91	88.000	Colobus_angolensis_palliatus
ENSPCAG00000005511	LSG1	81	90.667	ENSCGRG00001019846	Lsg1	90	90.667	Cricetulus_griseus_chok1gshd
ENSPCAG00000005511	LSG1	81	90.667	ENSCGRG00000014617	Lsg1	90	90.667	Cricetulus_griseus_crigri
ENSPCAG00000005511	LSG1	80	74.603	ENSCSEG00000008522	lsg1	84	71.053	Cynoglossus_semilaevis
ENSPCAG00000005511	LSG1	71	74.576	ENSCVAG00000002484	lsg1	89	70.667	Cyprinodon_variegatus
ENSPCAG00000005511	LSG1	90	75.000	ENSDARG00000015352	lsg1	89	75.000	Danio_rerio
ENSPCAG00000005511	LSG1	90	85.333	ENSDNOG00000006224	LSG1	90	85.333	Dasypus_novemcinctus
ENSPCAG00000005511	LSG1	69	63.636	FBgn0266284	Ns3	76	59.821	Drosophila_melanogaster
ENSPCAG00000005511	LSG1	77	88.000	ENSETEG00000003888	LSG1	79	88.000	Echinops_telfairi
ENSPCAG00000005511	LSG1	78	49.053	ENSEBUG00000003119	lsg1	75	48.295	Eptatretus_burgeri
ENSPCAG00000005511	LSG1	90	89.333	ENSEASG00005000678	LSG1	90	89.333	Equus_asinus_asinus
ENSPCAG00000005511	LSG1	90	86.667	ENSECAG00000017659	LSG1	90	86.667	Equus_caballus
ENSPCAG00000005511	LSG1	70	84.848	ENSEEUG00000015217	LSG1	70	84.848	Erinaceus_europaeus
ENSPCAG00000005511	LSG1	90	66.667	ENSELUG00000023973	lsg1	89	66.667	Esox_lucius
ENSPCAG00000005511	LSG1	90	85.333	ENSFCAG00000024957	LSG1	90	85.333	Felis_catus
ENSPCAG00000005511	LSG1	78	55.367	ENSFALG00000007210	LSG1	80	56.381	Ficedula_albicollis
ENSPCAG00000005511	LSG1	90	86.667	ENSFDAG00000017373	LSG1	90	86.667	Fukomys_damarensis
ENSPCAG00000005511	LSG1	86	73.333	ENSFHEG00000003680	lsg1	89	70.130	Fundulus_heteroclitus
ENSPCAG00000005511	LSG1	68	71.560	ENSGMOG00000015834	lsg1	77	67.949	Gadus_morhua
ENSPCAG00000005511	LSG1	70	79.245	ENSGALG00000007058	LSG1	78	57.418	Gallus_gallus
ENSPCAG00000005511	LSG1	87	76.271	ENSGAFG00000015831	lsg1	89	72.000	Gambusia_affinis
ENSPCAG00000005511	LSG1	87	70.312	ENSGACG00000009323	lsg1	89	67.532	Gasterosteus_aculeatus
ENSPCAG00000005511	LSG1	90	88.000	ENSGGOG00000000520	LSG1	91	88.000	Gorilla_gorilla
ENSPCAG00000005511	LSG1	90	72.000	ENSHBUG00000005659	lsg1	89	72.000	Haplochromis_burtoni
ENSPCAG00000005511	LSG1	70	89.333	ENSHGLG00000017390	LSG1	89	89.333	Heterocephalus_glaber_female
ENSPCAG00000005511	LSG1	70	89.333	ENSHGLG00100018587	LSG1	89	89.333	Heterocephalus_glaber_male
ENSPCAG00000005511	LSG1	87	76.271	ENSHCOG00000016848	lsg1	83	73.333	Hippocampus_comes
ENSPCAG00000005511	LSG1	90	71.053	ENSIPUG00000008631	lsg1	89	71.053	Ictalurus_punctatus
ENSPCAG00000005511	LSG1	81	81.818	ENSSTOG00000010234	LSG1	99	81.818	Ictidomys_tridecemlineatus
ENSPCAG00000005511	LSG1	90	82.667	ENSJJAG00000015513	Lsg1	90	82.667	Jaculus_jaculus
ENSPCAG00000005511	LSG1	71	72.581	ENSKMAG00000009681	lsg1	89	68.000	Kryptolebias_marmoratus
ENSPCAG00000005511	LSG1	73	70.968	ENSLBEG00000024261	lsg1	89	68.000	Labrus_bergylta
ENSPCAG00000005511	LSG1	90	69.333	ENSLACG00000013399	LSG1	90	69.333	Latimeria_chalumnae
ENSPCAG00000005511	LSG1	88	79.032	ENSLOCG00000004918	lsg1	89	75.000	Lepisosteus_oculatus
ENSPCAG00000005511	LSG1	90	89.333	ENSLAFG00000012919	-	90	89.333	Loxodonta_africana
ENSPCAG00000005511	LSG1	90	86.667	ENSMFAG00000039903	LSG1	91	86.667	Macaca_fascicularis
ENSPCAG00000005511	LSG1	90	86.667	ENSMMUG00000010708	LSG1	90	86.667	Macaca_mulatta
ENSPCAG00000005511	LSG1	90	86.667	ENSMNEG00000031538	LSG1	91	86.667	Macaca_nemestrina
ENSPCAG00000005511	LSG1	90	86.667	ENSMLEG00000041184	LSG1	91	86.667	Mandrillus_leucophaeus
ENSPCAG00000005511	LSG1	82	72.000	ENSMAMG00000000470	lsg1	81	72.000	Mastacembelus_armatus
ENSPCAG00000005511	LSG1	90	72.000	ENSMZEG00005017865	lsg1	89	72.000	Maylandia_zebra
ENSPCAG00000005511	LSG1	59	79.245	ENSMGAG00000007050	LSG1	88	57.033	Meleagris_gallopavo
ENSPCAG00000005511	LSG1	72	87.013	ENSMAUG00000016976	Lsg1	82	87.013	Mesocricetus_auratus
ENSPCAG00000005511	LSG1	90	89.333	ENSMICG00000049087	LSG1	90	89.333	Microcebus_murinus
ENSPCAG00000005511	LSG1	81	89.333	ENSMOCG00000022136	Lsg1	90	89.333	Microtus_ochrogaster
ENSPCAG00000005511	LSG1	69	79.032	ENSMMOG00000008884	lsg1	80	74.667	Mola_mola
ENSPCAG00000005511	LSG1	89	49.315	ENSMODG00000019828	LSG1	82	56.962	Monodelphis_domestica
ENSPCAG00000005511	LSG1	90	86.667	MGP_CAROLIEiJ_G0020648	Lsg1	90	86.667	Mus_caroli
ENSPCAG00000005511	LSG1	90	86.667	ENSMUSG00000022538	Lsg1	90	86.667	Mus_musculus
ENSPCAG00000005511	LSG1	88	89.231	MGP_PahariEiJ_G0016352	Lsg1	90	84.211	Mus_pahari
ENSPCAG00000005511	LSG1	90	86.667	MGP_SPRETEiJ_G0021544	Lsg1	90	86.667	Mus_spretus
ENSPCAG00000005511	LSG1	90	81.333	ENSMPUG00000003734	LSG1	90	81.333	Mustela_putorius_furo
ENSPCAG00000005511	LSG1	90	90.667	ENSMLUG00000012548	LSG1	90	90.667	Myotis_lucifugus
ENSPCAG00000005511	LSG1	90	86.667	ENSNGAG00000021872	Lsg1	89	86.667	Nannospalax_galili
ENSPCAG00000005511	LSG1	90	85.333	ENSNLEG00000008293	LSG1	91	85.333	Nomascus_leucogenys
ENSPCAG00000005511	LSG1	59	93.548	ENSMEUG00000009041	-	72	93.548	Notamacropus_eugenii
ENSPCAG00000005511	LSG1	81	72.000	ENSONIG00000002635	lsg1	89	72.000	Oreochromis_niloticus
ENSPCAG00000005511	LSG1	85	88.095	ENSOANG00000012742	LSG1	88	88.095	Ornithorhynchus_anatinus
ENSPCAG00000005511	LSG1	90	89.333	ENSOCUG00000004817	LSG1	90	89.333	Oryctolagus_cuniculus
ENSPCAG00000005511	LSG1	88	79.032	ENSORLG00000007695	lsg1	89	73.333	Oryzias_latipes
ENSPCAG00000005511	LSG1	88	79.032	ENSORLG00020016286	lsg1	89	73.333	Oryzias_latipes_hni
ENSPCAG00000005511	LSG1	88	79.032	ENSORLG00015012025	lsg1	89	73.333	Oryzias_latipes_hsok
ENSPCAG00000005511	LSG1	69	79.032	ENSOMEG00000022379	lsg1	89	73.333	Oryzias_melastigma
ENSPCAG00000005511	LSG1	90	86.667	ENSOGAG00000003475	LSG1	90	86.667	Otolemur_garnettii
ENSPCAG00000005511	LSG1	90	85.333	ENSOARG00000020403	LSG1	90	85.333	Ovis_aries
ENSPCAG00000005511	LSG1	90	88.000	ENSPPAG00000029271	LSG1	91	88.000	Pan_paniscus
ENSPCAG00000005511	LSG1	90	85.333	ENSPPRG00000010281	LSG1	90	85.333	Panthera_pardus
ENSPCAG00000005511	LSG1	90	85.333	ENSPTIG00000010789	LSG1	90	85.333	Panthera_tigris_altaica
ENSPCAG00000005511	LSG1	90	88.000	ENSPTRG00000015760	LSG1	91	88.000	Pan_troglodytes
ENSPCAG00000005511	LSG1	90	86.667	ENSPANG00000018249	LSG1	91	86.667	Papio_anubis
ENSPCAG00000005511	LSG1	64	92.857	ENSPKIG00000002895	lsg1	78	92.857	Paramormyrops_kingsleyae
ENSPCAG00000005511	LSG1	86	76.000	ENSPSIG00000009821	LSG1	88	76.000	Pelodiscus_sinensis
ENSPCAG00000005511	LSG1	84	90.476	ENSPMGG00000000931	lsg1	88	90.476	Periophthalmus_magnuspinnatus
ENSPCAG00000005511	LSG1	90	86.667	ENSPEMG00000012082	-	90	86.667	Peromyscus_maniculatus_bairdii
ENSPCAG00000005511	LSG1	90	65.333	ENSPMAG00000007451	lsg1	90	65.333	Petromyzon_marinus
ENSPCAG00000005511	LSG1	83	59.091	ENSPCIG00000013890	LSG1	67	59.697	Phascolarctos_cinereus
ENSPCAG00000005511	LSG1	87	76.271	ENSPFOG00000021882	lsg1	89	72.000	Poecilia_formosa
ENSPCAG00000005511	LSG1	87	76.271	ENSPLAG00000019536	lsg1	89	72.000	Poecilia_latipinna
ENSPCAG00000005511	LSG1	87	76.271	ENSPMEG00000017281	lsg1	89	72.000	Poecilia_mexicana
ENSPCAG00000005511	LSG1	78	76.271	ENSPREG00000006048	lsg1	83	72.000	Poecilia_reticulata
ENSPCAG00000005511	LSG1	82	88.000	ENSPPYG00000014425	LSG1	89	88.000	Pongo_abelii
ENSPCAG00000005511	LSG1	90	85.333	ENSPCOG00000012360	LSG1	90	85.333	Propithecus_coquereli
ENSPCAG00000005511	LSG1	90	72.000	ENSPNYG00000021994	lsg1	90	72.000	Pundamilia_nyererei
ENSPCAG00000005511	LSG1	90	72.000	ENSPNAG00000015533	lsg1	89	72.000	Pygocentrus_nattereri
ENSPCAG00000005511	LSG1	90	88.000	ENSRNOG00000001727	Lsg1	90	88.000	Rattus_norvegicus
ENSPCAG00000005511	LSG1	90	82.667	ENSRBIG00000029053	LSG1	90	82.667	Rhinopithecus_bieti
ENSPCAG00000005511	LSG1	90	82.667	ENSRROG00000037702	LSG1	90	82.667	Rhinopithecus_roxellana
ENSPCAG00000005511	LSG1	90	88.000	ENSSBOG00000034938	LSG1	90	88.000	Saimiri_boliviensis_boliviensis
ENSPCAG00000005511	LSG1	78	54.789	ENSSHAG00000003487	LSG1	99	55.153	Sarcophilus_harrisii
ENSPCAG00000005511	LSG1	88	69.355	ENSSFOG00015008955	lsg1	89	65.789	Scleropages_formosus
ENSPCAG00000005511	LSG1	88	77.419	ENSSDUG00000004622	lsg1	89	73.333	Seriola_dumerili
ENSPCAG00000005511	LSG1	79	77.419	ENSSLDG00000010869	lsg1	89	72.000	Seriola_lalandi_dorsalis
ENSPCAG00000005511	LSG1	55	92.308	ENSSARG00000012981	LSG1	67	92.308	Sorex_araneus
ENSPCAG00000005511	LSG1	90	71.053	ENSSPUG00000016347	LSG1	90	71.053	Sphenodon_punctatus
ENSPCAG00000005511	LSG1	81	70.667	ENSSPAG00000005508	lsg1	92	70.667	Stegastes_partitus
ENSPCAG00000005511	LSG1	90	85.333	ENSSSCG00000011827	LSG1	89	85.333	Sus_scrofa
ENSPCAG00000005511	LSG1	78	53.445	ENSTGUG00000009068	LSG1	88	53.604	Taeniopygia_guttata
ENSPCAG00000005511	LSG1	79	74.576	ENSTRUG00000017380	lsg1	89	72.000	Takifugu_rubripes
ENSPCAG00000005511	LSG1	79	74.576	ENSTNIG00000015570	lsg1	89	70.667	Tetraodon_nigroviridis
ENSPCAG00000005511	LSG1	90	85.333	ENSTTRG00000000559	LSG1	90	85.333	Tursiops_truncatus
ENSPCAG00000005511	LSG1	90	84.000	ENSUAMG00000012454	LSG1	90	84.000	Ursus_americanus
ENSPCAG00000005511	LSG1	90	84.000	ENSUMAG00000000855	LSG1	90	84.000	Ursus_maritimus
ENSPCAG00000005511	LSG1	80	95.238	ENSVPAG00000012400	LSG1	84	95.238	Vicugna_pacos
ENSPCAG00000005511	LSG1	85	97.619	ENSVVUG00000008956	LSG1	87	97.619	Vulpes_vulpes
ENSPCAG00000005511	LSG1	70	81.132	ENSXETG00000003451	lsg1	89	73.333	Xenopus_tropicalis
ENSPCAG00000005511	LSG1	87	76.271	ENSXCOG00000003239	lsg1	89	72.000	Xiphophorus_couchianus
ENSPCAG00000005511	LSG1	87	76.271	ENSXMAG00000005536	lsg1	90	72.000	Xiphophorus_maculatus