EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000005629 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 174804 bases
Position: chrGeneScaffold_572:11487-186290
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005332	S1	PF00575.23	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005712	SRBD1-201	2793	-	ENSPCAP00000005332	931 (aa)	-	UPI00018B054E

Gene Model

Click here to download ENSPCAG00000005629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005629	SRBD1	85	81.830	ENSG00000068784	SRBD1	82	81.830	Homo_sapiens
ENSPCAG00000005629	SRBD1	80	51.120	ENSAPOG00000005103	si:ch211-117n7.8	76	51.380	Acanthochromis_polyacanthus
ENSPCAG00000005629	SRBD1	85	83.134	ENSAMEG00000005993	SRBD1	82	83.134	Ailuropoda_melanoleuca
ENSPCAG00000005629	SRBD1	80	52.431	ENSACIG00000009875	si:ch211-117n7.8	77	52.431	Amphilophus_citrinellus
ENSPCAG00000005629	SRBD1	80	51.252	ENSAOCG00000024718	si:ch211-117n7.8	76	51.579	Amphiprion_ocellaris
ENSPCAG00000005629	SRBD1	80	51.579	ENSAPEG00000002645	si:ch211-117n7.8	79	51.579	Amphiprion_percula
ENSPCAG00000005629	SRBD1	80	53.088	ENSATEG00000010844	si:ch211-117n7.8	76	53.088	Anabas_testudineus
ENSPCAG00000005629	SRBD1	80	72.944	ENSAPLG00000006313	SRBD1	76	72.944	Anas_platyrhynchos
ENSPCAG00000005629	SRBD1	85	82.228	ENSANAG00000025573	SRBD1	82	82.228	Aotus_nancymaae
ENSPCAG00000005629	SRBD1	80	51.832	ENSACLG00000024219	si:ch211-117n7.8	74	52.094	Astatotilapia_calliptera
ENSPCAG00000005629	SRBD1	80	56.175	ENSAMXG00000004294	SRBD1	76	56.308	Astyanax_mexicanus
ENSPCAG00000005629	SRBD1	85	81.854	ENSBTAG00000007508	SRBD1	79	81.854	Bos_taurus
ENSPCAG00000005629	SRBD1	85	81.167	ENSCJAG00000000727	SRBD1	82	81.167	Callithrix_jacchus
ENSPCAG00000005629	SRBD1	85	82.804	ENSCAFG00000002554	SRBD1	82	82.804	Canis_familiaris
ENSPCAG00000005629	SRBD1	85	82.119	ENSCAFG00020026284	SRBD1	88	83.042	Canis_lupus_dingo
ENSPCAG00000005629	SRBD1	85	81.589	ENSCHIG00000016535	SRBD1	81	81.589	Capra_hircus
ENSPCAG00000005629	SRBD1	86	82.563	ENSTSYG00000012797	SRBD1	82	82.563	Carlito_syrichta
ENSPCAG00000005629	SRBD1	86	82.773	ENSCPOG00000004773	SRBD1	82	82.773	Cavia_porcellus
ENSPCAG00000005629	SRBD1	85	82.493	ENSCCAG00000025589	SRBD1	82	82.493	Cebus_capucinus
ENSPCAG00000005629	SRBD1	85	82.095	ENSCATG00000039530	SRBD1	82	82.095	Cercocebus_atys
ENSPCAG00000005629	SRBD1	86	83.445	ENSCLAG00000008623	SRBD1	83	83.445	Chinchilla_lanigera
ENSPCAG00000005629	SRBD1	85	82.228	ENSCSAG00000013350	SRBD1	82	82.228	Chlorocebus_sabaeus
ENSPCAG00000005629	SRBD1	69	94.118	ENSCHOG00000003805	SRBD1	65	94.118	Choloepus_hoffmanni
ENSPCAG00000005629	SRBD1	80	73.838	ENSCPBG00000005677	SRBD1	77	73.838	Chrysemys_picta_bellii
ENSPCAG00000005629	SRBD1	77	37.311	ENSCING00000005950	-	94	37.311	Ciona_intestinalis
ENSPCAG00000005629	SRBD1	77	37.344	ENSCSAVG00000000861	-	92	37.344	Ciona_savignyi
ENSPCAG00000005629	SRBD1	86	81.963	ENSCANG00000016307	SRBD1	82	81.963	Colobus_angolensis_palliatus
ENSPCAG00000005629	SRBD1	86	81.016	ENSCGRG00001000513	Srbd1	82	81.016	Cricetulus_griseus_chok1gshd
ENSPCAG00000005629	SRBD1	86	81.016	ENSCGRG00000002283	Srbd1	82	81.016	Cricetulus_griseus_crigri
ENSPCAG00000005629	SRBD1	80	51.643	ENSCSEG00000000856	si:ch211-117n7.8	76	51.774	Cynoglossus_semilaevis
ENSPCAG00000005629	SRBD1	80	52.237	ENSCVAG00000020212	si:ch211-117n7.8	81	52.237	Cyprinodon_variegatus
ENSPCAG00000005629	SRBD1	86	81.926	ENSDNOG00000018686	SRBD1	82	81.926	Dasypus_novemcinctus
ENSPCAG00000005629	SRBD1	86	81.635	ENSDORG00000010468	Srbd1	82	81.635	Dipodomys_ordii
ENSPCAG00000005629	SRBD1	78	33.201	FBgn0051156	CG31156	76	34.263	Drosophila_melanogaster
ENSPCAG00000005629	SRBD1	78	90.458	ENSETEG00000000739	SRBD1	76	90.458	Echinops_telfairi
ENSPCAG00000005629	SRBD1	74	42.390	ENSEBUG00000008902	si:ch211-117n7.8	93	42.390	Eptatretus_burgeri
ENSPCAG00000005629	SRBD1	82	81.768	ENSEASG00005003132	SRBD1	89	85.656	Equus_asinus_asinus
ENSPCAG00000005629	SRBD1	85	82.252	ENSECAG00000013865	SRBD1	80	82.252	Equus_caballus
ENSPCAG00000005629	SRBD1	80	54.365	ENSELUG00000012592	si:ch211-117n7.8	73	54.365	Esox_lucius
ENSPCAG00000005629	SRBD1	85	82.781	ENSFCAG00000005101	SRBD1	82	82.781	Felis_catus
ENSPCAG00000005629	SRBD1	80	70.470	ENSFALG00000012966	SRBD1	77	70.470	Ficedula_albicollis
ENSPCAG00000005629	SRBD1	86	82.234	ENSFDAG00000016670	SRBD1	83	82.234	Fukomys_damarensis
ENSPCAG00000005629	SRBD1	80	52.618	ENSFHEG00000019480	si:ch211-117n7.8	75	52.618	Fundulus_heteroclitus
ENSPCAG00000005629	SRBD1	80	72.304	ENSGALG00000009990	SRBD1	77	72.304	Gallus_gallus
ENSPCAG00000005629	SRBD1	80	52.237	ENSGAFG00000019664	si:ch211-117n7.8	76	52.237	Gambusia_affinis
ENSPCAG00000005629	SRBD1	61	55.556	ENSGACG00000010794	si:ch211-117n7.8	94	55.897	Gasterosteus_aculeatus
ENSPCAG00000005629	SRBD1	80	73.670	ENSGAGG00000006166	SRBD1	90	73.670	Gopherus_agassizii
ENSPCAG00000005629	SRBD1	86	81.963	ENSGGOG00000005910	SRBD1	84	81.963	Gorilla_gorilla
ENSPCAG00000005629	SRBD1	74	49.138	ENSHBUG00000013207	si:ch211-117n7.8	74	49.425	Haplochromis_burtoni
ENSPCAG00000005629	SRBD1	86	82.574	ENSHGLG00000018153	-	82	82.574	Heterocephalus_glaber_female
ENSPCAG00000005629	SRBD1	86	82.440	ENSHGLG00100015183	-	82	82.440	Heterocephalus_glaber_male
ENSPCAG00000005629	SRBD1	80	56.000	ENSIPUG00000009661	srbd1	76	56.000	Ictalurus_punctatus
ENSPCAG00000005629	SRBD1	86	84.027	ENSSTOG00000005898	SRBD1	82	84.027	Ictidomys_tridecemlineatus
ENSPCAG00000005629	SRBD1	86	75.033	ENSJJAG00000022244	Srbd1	82	75.033	Jaculus_jaculus
ENSPCAG00000005629	SRBD1	80	51.974	ENSKMAG00000003473	si:ch211-117n7.8	75	51.974	Kryptolebias_marmoratus
ENSPCAG00000005629	SRBD1	80	52.708	ENSLBEG00000027518	si:ch211-117n7.8	75	52.708	Labrus_bergylta
ENSPCAG00000005629	SRBD1	80	65.517	ENSLACG00000009790	SRBD1	89	65.517	Latimeria_chalumnae
ENSPCAG00000005629	SRBD1	80	57.616	ENSLOCG00000016360	si:ch211-117n7.8	76	57.616	Lepisosteus_oculatus
ENSPCAG00000005629	SRBD1	85	82.228	ENSMFAG00000042026	SRBD1	82	82.228	Macaca_fascicularis
ENSPCAG00000005629	SRBD1	85	82.228	ENSMMUG00000003490	SRBD1	82	82.228	Macaca_mulatta
ENSPCAG00000005629	SRBD1	85	79.630	ENSMNEG00000034701	SRBD1	82	80.000	Macaca_nemestrina
ENSPCAG00000005629	SRBD1	85	81.963	ENSMLEG00000000745	SRBD1	82	81.963	Mandrillus_leucophaeus
ENSPCAG00000005629	SRBD1	80	51.447	ENSMAMG00000021921	si:ch211-117n7.8	76	51.447	Mastacembelus_armatus
ENSPCAG00000005629	SRBD1	80	51.832	ENSMZEG00005027369	si:ch211-117n7.8	74	52.094	Maylandia_zebra
ENSPCAG00000005629	SRBD1	79	67.420	ENSMGAG00000010273	SRBD1	94	67.420	Meleagris_gallopavo
ENSPCAG00000005629	SRBD1	79	77.850	ENSMAUG00000013916	Srbd1	92	77.850	Mesocricetus_auratus
ENSPCAG00000005629	SRBD1	85	82.759	ENSMICG00000007835	SRBD1	82	82.759	Microcebus_murinus
ENSPCAG00000005629	SRBD1	86	79.679	ENSMOCG00000018716	Srbd1	82	79.679	Microtus_ochrogaster
ENSPCAG00000005629	SRBD1	80	51.184	ENSMMOG00000007507	si:ch211-117n7.8	79	51.184	Mola_mola
ENSPCAG00000005629	SRBD1	80	51.905	ENSMALG00000001562	si:ch211-117n7.8	76	52.086	Monopterus_albus
ENSPCAG00000005629	SRBD1	85	79.384	MGP_CAROLIEiJ_G0021934	Srbd1	91	83.274	Mus_caroli
ENSPCAG00000005629	SRBD1	86	79.518	ENSMUSG00000024135	Srbd1	91	78.161	Mus_musculus
ENSPCAG00000005629	SRBD1	86	78.849	MGP_PahariEiJ_G0020924	Srbd1	82	78.849	Mus_pahari
ENSPCAG00000005629	SRBD1	86	79.384	MGP_SPRETEiJ_G0022850	Srbd1	82	79.384	Mus_spretus
ENSPCAG00000005629	SRBD1	85	80.000	ENSMLUG00000007039	SRBD1	82	80.000	Myotis_lucifugus
ENSPCAG00000005629	SRBD1	86	78.093	ENSNGAG00000011893	Srbd1	83	78.093	Nannospalax_galili
ENSPCAG00000005629	SRBD1	80	50.796	ENSNBRG00000012873	si:ch211-117n7.8	76	50.796	Neolamprologus_brichardi
ENSPCAG00000005629	SRBD1	85	81.698	ENSNLEG00000016877	SRBD1	82	81.698	Nomascus_leucogenys
ENSPCAG00000005629	SRBD1	86	81.561	ENSODEG00000012095	SRBD1	82	81.561	Octodon_degus
ENSPCAG00000005629	SRBD1	80	52.053	ENSONIG00000000945	si:ch211-117n7.8	91	52.368	Oreochromis_niloticus
ENSPCAG00000005629	SRBD1	85	82.384	ENSOCUG00000015385	SRBD1	82	82.517	Oryctolagus_cuniculus
ENSPCAG00000005629	SRBD1	80	49.077	ENSORLG00000004427	si:ch211-117n7.8	73	49.077	Oryzias_latipes
ENSPCAG00000005629	SRBD1	80	51.847	ENSORLG00020012792	si:ch211-117n7.8	74	51.979	Oryzias_latipes_hni
ENSPCAG00000005629	SRBD1	80	51.847	ENSORLG00015018598	si:ch211-117n7.8	74	51.847	Oryzias_latipes_hsok
ENSPCAG00000005629	SRBD1	80	51.123	ENSOMEG00000012229	si:ch211-117n7.8	74	51.387	Oryzias_melastigma
ENSPCAG00000005629	SRBD1	86	76.821	ENSOGAG00000001076	SRBD1	82	76.821	Otolemur_garnettii
ENSPCAG00000005629	SRBD1	85	75.696	ENSOARG00000005958	SRBD1	83	75.696	Ovis_aries
ENSPCAG00000005629	SRBD1	85	81.963	ENSPPAG00000038442	SRBD1	82	81.963	Pan_paniscus
ENSPCAG00000005629	SRBD1	85	83.024	ENSPPRG00000003449	SRBD1	82	83.024	Panthera_pardus
ENSPCAG00000005629	SRBD1	85	83.024	ENSPTIG00000012495	SRBD1	82	83.024	Panthera_tigris_altaica
ENSPCAG00000005629	SRBD1	85	81.830	ENSPTRG00000011889	SRBD1	82	81.830	Pan_troglodytes
ENSPCAG00000005629	SRBD1	85	82.095	ENSPANG00000008063	SRBD1	82	82.095	Papio_anubis
ENSPCAG00000005629	SRBD1	80	54.826	ENSPKIG00000021973	si:ch211-117n7.8	77	54.826	Paramormyrops_kingsleyae
ENSPCAG00000005629	SRBD1	80	73.838	ENSPSIG00000008992	SRBD1	77	73.838	Pelodiscus_sinensis
ENSPCAG00000005629	SRBD1	80	50.856	ENSPMGG00000013348	si:ch211-117n7.8	79	50.856	Periophthalmus_magnuspinnatus
ENSPCAG00000005629	SRBD1	86	78.238	ENSPEMG00000020684	Srbd1	82	78.238	Peromyscus_maniculatus_bairdii
ENSPCAG00000005629	SRBD1	80	52.632	ENSPFOG00000010650	si:ch211-117n7.8	75	52.632	Poecilia_formosa
ENSPCAG00000005629	SRBD1	80	52.632	ENSPLAG00000002141	si:ch211-117n7.8	75	52.632	Poecilia_latipinna
ENSPCAG00000005629	SRBD1	80	52.632	ENSPMEG00000018537	si:ch211-117n7.8	75	52.632	Poecilia_mexicana
ENSPCAG00000005629	SRBD1	80	51.969	ENSPREG00000003258	si:ch211-117n7.8	77	51.969	Poecilia_reticulata
ENSPCAG00000005629	SRBD1	82	86.624	ENSPPYG00000012444	SRBD1	73	86.624	Pongo_abelii
ENSPCAG00000005629	SRBD1	84	75.926	ENSPCOG00000017669	SRBD1	80	76.667	Propithecus_coquereli
ENSPCAG00000005629	SRBD1	79	76.361	ENSPVAG00000001782	SRBD1	76	76.361	Pteropus_vampyrus
ENSPCAG00000005629	SRBD1	80	48.738	ENSPNYG00000000508	si:ch211-117n7.8	77	49.137	Pundamilia_nyererei
ENSPCAG00000005629	SRBD1	80	56.267	ENSPNAG00000013492	SRBD1	77	56.267	Pygocentrus_nattereri
ENSPCAG00000005629	SRBD1	85	78.800	ENSRNOG00000014720	Srbd1	82	79.679	Rattus_norvegicus
ENSPCAG00000005629	SRBD1	85	81.698	ENSRBIG00000033486	SRBD1	82	81.698	Rhinopithecus_bieti
ENSPCAG00000005629	SRBD1	85	81.698	ENSRROG00000041599	SRBD1	82	81.698	Rhinopithecus_roxellana
ENSPCAG00000005629	SRBD1	85	82.095	ENSSBOG00000024982	SRBD1	82	82.095	Saimiri_boliviensis_boliviensis
ENSPCAG00000005629	SRBD1	80	54.497	ENSSFOG00015001128	si:ch211-117n7.8	81	54.497	Scleropages_formosus
ENSPCAG00000005629	SRBD1	80	52.237	ENSSMAG00000018256	si:ch211-117n7.8	74	52.431	Scophthalmus_maximus
ENSPCAG00000005629	SRBD1	80	51.643	ENSSLDG00000023189	si:ch211-117n7.8	75	51.643	Seriola_lalandi_dorsalis
ENSPCAG00000005629	SRBD1	77	89.474	ENSSARG00000009740	SRBD1	75	89.474	Sorex_araneus
ENSPCAG00000005629	SRBD1	80	73.351	ENSSPUG00000010475	SRBD1	84	73.351	Sphenodon_punctatus
ENSPCAG00000005629	SRBD1	80	48.947	ENSSPAG00000008092	-	76	49.146	Stegastes_partitus
ENSPCAG00000005629	SRBD1	85	82.914	ENSSSCG00000008445	SRBD1	80	82.914	Sus_scrofa
ENSPCAG00000005629	SRBD1	80	70.955	ENSTGUG00000003878	SRBD1	91	70.955	Taeniopygia_guttata
ENSPCAG00000005629	SRBD1	80	51.309	ENSTRUG00000007080	si:ch211-117n7.8	84	51.974	Takifugu_rubripes
ENSPCAG00000005629	SRBD1	80	49.547	ENSTNIG00000007464	si:ch211-117n7.8	75	49.547	Tetraodon_nigroviridis
ENSPCAG00000005629	SRBD1	61	90.558	ENSTBEG00000004556	SRBD1	59	90.558	Tupaia_belangeri
ENSPCAG00000005629	SRBD1	79	88.636	ENSTTRG00000011871	SRBD1	74	88.636	Tursiops_truncatus
ENSPCAG00000005629	SRBD1	85	82.649	ENSUAMG00000008126	SRBD1	88	83.665	Ursus_americanus
ENSPCAG00000005629	SRBD1	85	82.914	ENSUMAG00000012902	SRBD1	81	82.914	Ursus_maritimus
ENSPCAG00000005629	SRBD1	80	82.626	ENSVPAG00000006825	SRBD1	83	82.626	Vicugna_pacos
ENSPCAG00000005629	SRBD1	85	82.914	ENSVVUG00000005389	SRBD1	82	82.914	Vulpes_vulpes
ENSPCAG00000005629	SRBD1	80	50.884	ENSXETG00000002760	srbd1	77	51.139	Xenopus_tropicalis
ENSPCAG00000005629	SRBD1	80	51.974	ENSXMAG00000016861	si:ch211-117n7.8	75	51.974	Xiphophorus_maculatus