EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000005797 (Gene tree)
Gene ID: -
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 50268 bases
Position: chrGeneScaffold_811:698-50965
Accession: 29676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005492	CPL	PF08144.11	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005883	PUM3-201	2043	-	ENSPCAP00000005492	680 (aa)	-	UPI00018AE53A

Gene Model

Click here to download ENSPCAG00000005797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005797	PUM3	95	76.698	ENSG00000080608	PUM3	100	76.698	Homo_sapiens
ENSPCAG00000005797	PUM3	78	54.120	ENSAPOG00000020252	pum3	99	48.710	Acanthochromis_polyacanthus
ENSPCAG00000005797	PUM3	95	77.434	ENSAMEG00000012187	PUM3	100	77.434	Ailuropoda_melanoleuca
ENSPCAG00000005797	PUM3	62	61.429	ENSACIG00000009786	pum3	72	61.429	Amphilophus_citrinellus
ENSPCAG00000005797	PUM3	78	54.682	ENSAOCG00000004439	pum3	99	49.317	Amphiprion_ocellaris
ENSPCAG00000005797	PUM3	78	54.682	ENSAPEG00000020523	pum3	99	49.317	Amphiprion_percula
ENSPCAG00000005797	PUM3	78	55.431	ENSATEG00000005799	pum3	91	52.138	Anabas_testudineus
ENSPCAG00000005797	PUM3	91	63.505	ENSAPLG00000002920	PUM3	100	63.505	Anas_platyrhynchos
ENSPCAG00000005797	PUM3	88	60.265	ENSACAG00000003174	PUM3	99	62.230	Anolis_carolinensis
ENSPCAG00000005797	PUM3	95	77.054	ENSANAG00000024520	PUM3	99	77.054	Aotus_nancymaae
ENSPCAG00000005797	PUM3	89	50.794	ENSACLG00000001017	pum3	97	50.159	Astatotilapia_calliptera
ENSPCAG00000005797	PUM3	90	56.704	ENSAMXG00000020911	pum3	97	53.632	Astyanax_mexicanus
ENSPCAG00000005797	PUM3	95	77.434	ENSBTAG00000013357	PUM3	100	77.434	Bos_taurus
ENSPCAG00000005797	PUM3	58	32.432	WBGene00014165	puf-12	52	32.432	Caenorhabditis_elegans
ENSPCAG00000005797	PUM3	95	76.507	ENSCJAG00000010917	PUM3	100	76.507	Callithrix_jacchus
ENSPCAG00000005797	PUM3	95	77.623	ENSCAFG00000002035	PUM3	100	77.623	Canis_familiaris
ENSPCAG00000005797	PUM3	95	77.469	ENSCAFG00020026867	PUM3	100	77.469	Canis_lupus_dingo
ENSPCAG00000005797	PUM3	95	77.125	ENSCHIG00000021559	PUM3	100	77.125	Capra_hircus
ENSPCAG00000005797	PUM3	95	76.507	ENSTSYG00000007481	PUM3	100	76.507	Carlito_syrichta
ENSPCAG00000005797	PUM3	95	73.190	ENSCAPG00000010592	-	100	73.190	Cavia_aperea
ENSPCAG00000005797	PUM3	95	74.228	ENSCPOG00000008552	-	100	74.228	Cavia_porcellus
ENSPCAG00000005797	PUM3	95	75.889	ENSCCAG00000032650	PUM3	100	75.889	Cebus_capucinus
ENSPCAG00000005797	PUM3	95	77.469	ENSCATG00000024880	PUM3	100	77.434	Cercocebus_atys
ENSPCAG00000005797	PUM3	95	77.006	ENSCLAG00000011892	PUM3	100	77.006	Chinchilla_lanigera
ENSPCAG00000005797	PUM3	95	78.053	ENSCSAG00000008691	PUM3	100	78.053	Chlorocebus_sabaeus
ENSPCAG00000005797	PUM3	95	74.422	ENSCHOG00000002535	PUM3	95	74.422	Choloepus_hoffmanni
ENSPCAG00000005797	PUM3	95	63.369	ENSCPBG00000025470	PUM3	95	63.369	Chrysemys_picta_bellii
ENSPCAG00000005797	PUM3	56	40.731	ENSCING00000024199	-	68	40.731	Ciona_intestinalis
ENSPCAG00000005797	PUM3	61	40.909	ENSCSAVG00000006072	-	78	40.528	Ciona_savignyi
ENSPCAG00000005797	PUM3	95	77.743	ENSCANG00000006142	PUM3	100	77.743	Colobus_angolensis_palliatus
ENSPCAG00000005797	PUM3	95	76.235	ENSCGRG00001016402	Pum3	100	76.235	Cricetulus_griseus_chok1gshd
ENSPCAG00000005797	PUM3	95	76.235	ENSCGRG00000010207	Pum3	100	76.235	Cricetulus_griseus_crigri
ENSPCAG00000005797	PUM3	75	52.907	ENSCSEG00000001565	pum3	99	49.829	Cynoglossus_semilaevis
ENSPCAG00000005797	PUM3	59	51.866	ENSCVAG00000006550	pum3	98	52.593	Cyprinodon_variegatus
ENSPCAG00000005797	PUM3	90	58.466	ENSDARG00000087779	pum3	99	57.668	Danio_rerio
ENSPCAG00000005797	PUM3	81	79.481	ENSDNOG00000008157	PUM3	65	79.481	Dasypus_novemcinctus
ENSPCAG00000005797	PUM3	78	79.696	ENSETEG00000015331	PUM3	81	79.696	Echinops_telfairi
ENSPCAG00000005797	PUM3	73	37.426	ENSEBUG00000011586	pum3	75	37.426	Eptatretus_burgeri
ENSPCAG00000005797	PUM3	95	78.295	ENSEASG00005010350	PUM3	100	78.053	Equus_asinus_asinus
ENSPCAG00000005797	PUM3	95	78.295	ENSECAG00000017193	PUM3	100	78.053	Equus_caballus
ENSPCAG00000005797	PUM3	88	68.719	ENSEEUG00000010314	PUM3	99	68.719	Erinaceus_europaeus
ENSPCAG00000005797	PUM3	90	55.791	ENSELUG00000002215	pum3	94	55.791	Esox_lucius
ENSPCAG00000005797	PUM3	95	63.497	ENSFALG00000010509	PUM3	100	63.804	Ficedula_albicollis
ENSPCAG00000005797	PUM3	95	76.389	ENSFDAG00000021027	PUM3	100	76.389	Fukomys_damarensis
ENSPCAG00000005797	PUM3	79	59.585	ENSFHEG00000015576	pum3	98	59.686	Fundulus_heteroclitus
ENSPCAG00000005797	PUM3	79	53.918	ENSGMOG00000014217	pum3	96	54.280	Gadus_morhua
ENSPCAG00000005797	PUM3	95	61.905	ENSGALG00000010178	PUM3	100	62.577	Gallus_gallus
ENSPCAG00000005797	PUM3	55	58.684	ENSGAFG00000001930	pum3	64	59.151	Gambusia_affinis
ENSPCAG00000005797	PUM3	78	52.919	ENSGACG00000017878	pum3	96	52.852	Gasterosteus_aculeatus
ENSPCAG00000005797	PUM3	95	63.679	ENSGAGG00000018983	PUM3	99	63.679	Gopherus_agassizii
ENSPCAG00000005797	PUM3	95	77.280	ENSGGOG00000006143	PUM3	100	77.280	Gorilla_gorilla
ENSPCAG00000005797	PUM3	95	43.353	ENSHBUG00000012903	pum3	99	41.892	Haplochromis_burtoni
ENSPCAG00000005797	PUM3	95	76.198	ENSHGLG00000015868	-	100	76.198	Heterocephalus_glaber_female
ENSPCAG00000005797	PUM3	95	76.316	ENSHGLG00100018825	PUM3	100	76.316	Heterocephalus_glaber_male
ENSPCAG00000005797	PUM3	88	51.555	ENSHCOG00000010306	pum3	88	51.071	Hippocampus_comes
ENSPCAG00000005797	PUM3	83	59.823	ENSIPUG00000024801	pum3	97	56.661	Ictalurus_punctatus
ENSPCAG00000005797	PUM3	95	77.743	ENSSTOG00000009586	PUM3	100	77.743	Ictidomys_tridecemlineatus
ENSPCAG00000005797	PUM3	95	73.725	ENSJJAG00000012563	Pum3	99	73.725	Jaculus_jaculus
ENSPCAG00000005797	PUM3	82	53.819	ENSKMAG00000010277	pum3	99	50.386	Kryptolebias_marmoratus
ENSPCAG00000005797	PUM3	89	50.329	ENSLBEG00000012213	pum3	95	48.899	Labrus_bergylta
ENSPCAG00000005797	PUM3	94	58.282	ENSLACG00000008312	PUM3	99	58.896	Latimeria_chalumnae
ENSPCAG00000005797	PUM3	88	60.702	ENSLOCG00000012529	pum3	93	60.702	Lepisosteus_oculatus
ENSPCAG00000005797	PUM3	95	81.019	ENSLAFG00000017341	PUM3	100	81.019	Loxodonta_africana
ENSPCAG00000005797	PUM3	95	77.898	ENSMFAG00000001430	PUM3	100	77.898	Macaca_fascicularis
ENSPCAG00000005797	PUM3	95	77.812	ENSMMUG00000002362	PUM3	99	77.692	Macaca_mulatta
ENSPCAG00000005797	PUM3	95	77.898	ENSMNEG00000035288	PUM3	100	77.898	Macaca_nemestrina
ENSPCAG00000005797	PUM3	95	77.743	ENSMLEG00000034820	PUM3	100	77.743	Mandrillus_leucophaeus
ENSPCAG00000005797	PUM3	83	53.369	ENSMAMG00000022861	pum3	99	49.847	Mastacembelus_armatus
ENSPCAG00000005797	PUM3	94	47.846	ENSMZEG00005014205	pum3	97	49.466	Maylandia_zebra
ENSPCAG00000005797	PUM3	95	55.115	ENSMGAG00000002255	PUM3	100	55.115	Meleagris_gallopavo
ENSPCAG00000005797	PUM3	95	75.617	ENSMAUG00000009733	Pum3	100	75.617	Mesocricetus_auratus
ENSPCAG00000005797	PUM3	95	77.778	ENSMICG00000045916	PUM3	87	77.778	Microcebus_murinus
ENSPCAG00000005797	PUM3	95	72.248	ENSMOCG00000014830	-	100	71.783	Microtus_ochrogaster
ENSPCAG00000005797	PUM3	95	75.309	ENSMOCG00000019519	-	100	75.309	Microtus_ochrogaster
ENSPCAG00000005797	PUM3	89	47.011	ENSMMOG00000012184	pum3	97	46.634	Mola_mola
ENSPCAG00000005797	PUM3	95	59.362	ENSMODG00000015417	PUM3	92	66.893	Monodelphis_domestica
ENSPCAG00000005797	PUM3	78	54.494	ENSMALG00000022164	pum3	84	50.822	Monopterus_albus
ENSPCAG00000005797	PUM3	95	75.772	MGP_CAROLIEiJ_G0022845	Pum3	100	75.772	Mus_caroli
ENSPCAG00000005797	PUM3	95	75.617	ENSMUSG00000041360	Pum3	100	75.617	Mus_musculus
ENSPCAG00000005797	PUM3	95	75.580	MGP_PahariEiJ_G0014338	Pum3	100	75.463	Mus_pahari
ENSPCAG00000005797	PUM3	95	75.463	MGP_SPRETEiJ_G0023763	Pum3	100	75.463	Mus_spretus
ENSPCAG00000005797	PUM3	95	75.580	ENSMPUG00000005125	PUM3	100	75.580	Mustela_putorius_furo
ENSPCAG00000005797	PUM3	95	76.935	ENSMLUG00000002309	PUM3	100	76.816	Myotis_lucifugus
ENSPCAG00000005797	PUM3	95	73.344	ENSNGAG00000019468	Pum3	100	72.727	Nannospalax_galili
ENSPCAG00000005797	PUM3	88	48.350	ENSNBRG00000021370	pum3	79	53.586	Neolamprologus_brichardi
ENSPCAG00000005797	PUM3	95	76.816	ENSNLEG00000008712	PUM3	100	76.816	Nomascus_leucogenys
ENSPCAG00000005797	PUM3	72	47.639	ENSMEUG00000013606	-	96	47.521	Notamacropus_eugenii
ENSPCAG00000005797	PUM3	75	64.407	ENSOPRG00000004225	-	79	64.407	Ochotona_princeps
ENSPCAG00000005797	PUM3	95	76.235	ENSODEG00000003625	-	100	76.235	Octodon_degus
ENSPCAG00000005797	PUM3	87	78.066	ENSODEG00000016477	-	91	78.066	Octodon_degus
ENSPCAG00000005797	PUM3	89	49.842	ENSONIG00000012733	pum3	99	48.939	Oreochromis_niloticus
ENSPCAG00000005797	PUM3	78	67.803	ENSOANG00000014995	PUM3	97	67.803	Ornithorhynchus_anatinus
ENSPCAG00000005797	PUM3	95	76.816	ENSOCUG00000004189	-	100	76.816	Oryctolagus_cuniculus
ENSPCAG00000005797	PUM3	94	76.205	ENSOCUG00000026104	-	99	76.205	Oryctolagus_cuniculus
ENSPCAG00000005797	PUM3	89	49.753	ENSORLG00000014935	pum3	99	47.568	Oryzias_latipes
ENSPCAG00000005797	PUM3	89	49.753	ENSORLG00020002841	pum3	99	47.568	Oryzias_latipes_hni
ENSPCAG00000005797	PUM3	95	48.024	ENSORLG00015015906	pum3	99	47.720	Oryzias_latipes_hsok
ENSPCAG00000005797	PUM3	89	49.918	ENSOMEG00000009427	pum3	99	48.024	Oryzias_melastigma
ENSPCAG00000005797	PUM3	95	77.623	ENSOGAG00000008125	-	100	77.623	Otolemur_garnettii
ENSPCAG00000005797	PUM3	94	56.641	ENSOGAG00000033481	-	99	55.725	Otolemur_garnettii
ENSPCAG00000005797	PUM3	95	76.579	ENSOARG00000013337	PUM3	100	76.579	Ovis_aries
ENSPCAG00000005797	PUM3	95	76.852	ENSPPAG00000041337	PUM3	100	76.852	Pan_paniscus
ENSPCAG00000005797	PUM3	95	75.734	ENSPPRG00000000809	PUM3	100	75.734	Panthera_pardus
ENSPCAG00000005797	PUM3	95	76.043	ENSPTIG00000021934	PUM3	100	76.043	Panthera_tigris_altaica
ENSPCAG00000005797	PUM3	95	77.006	ENSPTRG00000020735	PUM3	100	77.006	Pan_troglodytes
ENSPCAG00000005797	PUM3	95	77.743	ENSPANG00000025118	PUM3	100	77.743	Papio_anubis
ENSPCAG00000005797	PUM3	95	55.860	ENSPKIG00000022249	pum3	99	53.241	Paramormyrops_kingsleyae
ENSPCAG00000005797	PUM3	95	63.833	ENSPSIG00000016272	PUM3	100	63.833	Pelodiscus_sinensis
ENSPCAG00000005797	PUM3	62	60.476	ENSPMGG00000021261	pum3	84	60.476	Periophthalmus_magnuspinnatus
ENSPCAG00000005797	PUM3	84	73.585	ENSPEMG00000019340	-	100	73.585	Peromyscus_maniculatus_bairdii
ENSPCAG00000005797	PUM3	95	65.182	ENSPCIG00000030598	PUM3	92	65.182	Phascolarctos_cinereus
ENSPCAG00000005797	PUM3	88	49.505	ENSPFOG00000001719	pum3	99	48.841	Poecilia_formosa
ENSPCAG00000005797	PUM3	89	48.714	ENSPLAG00000020010	pum3	96	49.196	Poecilia_latipinna
ENSPCAG00000005797	PUM3	89	48.875	ENSPMEG00000017451	pum3	97	48.875	Poecilia_mexicana
ENSPCAG00000005797	PUM3	95	77.280	ENSPPYG00000019255	PUM3	100	77.280	Pongo_abelii
ENSPCAG00000005797	PUM3	95	77.280	ENSPCOG00000027325	PUM3	100	77.280	Propithecus_coquereli
ENSPCAG00000005797	PUM3	95	75.809	ENSPVAG00000016135	PUM3	95	75.809	Pteropus_vampyrus
ENSPCAG00000005797	PUM3	87	51.540	ENSPNYG00000016124	pum3	99	49.543	Pundamilia_nyererei
ENSPCAG00000005797	PUM3	90	57.236	ENSPNAG00000026524	pum3	97	57.236	Pygocentrus_nattereri
ENSPCAG00000005797	PUM3	95	73.107	ENSRNOG00000048356	RGD1308750	100	73.107	Rattus_norvegicus
ENSPCAG00000005797	PUM3	95	73.416	ENSRNOG00000012574	Pum3	100	73.416	Rattus_norvegicus
ENSPCAG00000005797	PUM3	95	77.623	ENSRBIG00000036924	PUM3	100	77.434	Rhinopithecus_bieti
ENSPCAG00000005797	PUM3	95	77.589	ENSRROG00000041089	PUM3	100	77.589	Rhinopithecus_roxellana
ENSPCAG00000005797	PUM3	95	77.125	ENSSBOG00000028066	PUM3	100	77.125	Saimiri_boliviensis_boliviensis
ENSPCAG00000005797	PUM3	95	67.899	ENSSHAG00000003730	PUM3	100	67.334	Sarcophilus_harrisii
ENSPCAG00000005797	PUM3	90	57.532	ENSSFOG00015018778	pum3	97	57.532	Scleropages_formosus
ENSPCAG00000005797	PUM3	78	54.614	ENSSMAG00000013236	pum3	91	50.909	Scophthalmus_maximus
ENSPCAG00000005797	PUM3	89	51.071	ENSSDUG00000001887	pum3	97	49.085	Seriola_dumerili
ENSPCAG00000005797	PUM3	89	50.658	ENSSLDG00000015766	pum3	99	48.265	Seriola_lalandi_dorsalis
ENSPCAG00000005797	PUM3	91	71.359	ENSSARG00000000579	PUM3	99	71.359	Sorex_araneus
ENSPCAG00000005797	PUM3	93	62.441	ENSSPUG00000001707	PUM3	100	62.539	Sphenodon_punctatus
ENSPCAG00000005797	PUM3	78	54.307	ENSSPAG00000003976	pum3	99	48.855	Stegastes_partitus
ENSPCAG00000005797	PUM3	95	77.160	ENSSSCG00000005227	PUM3	100	77.160	Sus_scrofa
ENSPCAG00000005797	PUM3	95	63.060	ENSTGUG00000005339	PUM3	100	63.060	Taeniopygia_guttata
ENSPCAG00000005797	PUM3	95	48.729	ENSTRUG00000004074	pum3	99	48.710	Takifugu_rubripes
ENSPCAG00000005797	PUM3	86	53.072	ENSTNIG00000010325	pum3	99	51.613	Tetraodon_nigroviridis
ENSPCAG00000005797	PUM3	73	87.500	ENSTBEG00000013058	PUM3	76	87.500	Tupaia_belangeri
ENSPCAG00000005797	PUM3	95	84.877	ENSTTRG00000001062	PUM3	96	84.900	Tursiops_truncatus
ENSPCAG00000005797	PUM3	83	81.888	ENSUMAG00000018443	PUM3	90	92.157	Ursus_maritimus
ENSPCAG00000005797	PUM3	95	77.385	ENSVPAG00000010766	PUM3	99	77.385	Vicugna_pacos
ENSPCAG00000005797	PUM3	95	77.778	ENSVVUG00000006527	PUM3	100	77.778	Vulpes_vulpes
ENSPCAG00000005797	PUM3	92	53.155	ENSXETG00000011707	pum3	97	53.155	Xenopus_tropicalis
ENSPCAG00000005797	PUM3	86	48.495	ENSXCOG00000006725	pum3	87	51.048	Xiphophorus_couchianus
ENSPCAG00000005797	PUM3	89	49.114	ENSXMAG00000002926	pum3	96	49.035	Xiphophorus_maculatus