EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPCAG00000005902 (Gene tree)
Gene ID
-
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Procavia_capensis
Status
putative
Strand
Plus strand
Length
3868 bases
Position
chrGeneScaffold_7603:79018-82885
Accession
8565
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCAP00000005468RRM_1PF00076.222.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCAT00000005857PABPN1-201885-ENSPCAP00000005468295 (aa)-UPI00018AF1F6
Gene Model
Click here to download ENSPCAG00000005902's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005902's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCAG00000005902PABPN16082.584ENSG00000258643BCL2L2-PABPN15382.584Homo_sapiens
ENSPCAG00000005902PABPN17285.308ENSG00000100836PABPN19698.913Homo_sapiens
ENSPCAG00000005902PABPN18459.600ENSAPOG00000016425pabpn17968.750Acanthochromis_polyacanthus
ENSPCAG00000005902PABPN16082.584ENSAMEG00000007048BCL2L2-PABPN19382.584Ailuropoda_melanoleuca
ENSPCAG00000005902PABPN18559.289ENSACIG00000021744pabpn18465.584Amphilophus_citrinellus
ENSPCAG00000005902PABPN18259.426ENSAOCG00000015805pabpn17968.750Amphiprion_ocellaris
ENSPCAG00000005902PABPN18259.426ENSAPEG00000009623pabpn17968.750Amphiprion_percula
ENSPCAG00000005902PABPN18259.836ENSATEG00000020531pabpn17969.271Anabas_testudineus
ENSPCAG00000005902PABPN16373.118ENSACAG00000006185-7072.222Anolis_carolinensis
ENSPCAG00000005902PABPN16483.598ENSANAG00000024513-6984.021Aotus_nancymaae
ENSPCAG00000005902PABPN18559.289ENSACLG00000016374pabpn16568.557Astatotilapia_calliptera
ENSPCAG00000005902PABPN18460.400ENSAMXG00000000452pabpn18466.883Astyanax_mexicanus
ENSPCAG00000005902PABPN18868.462ENSBTAG00000050594-8870.656Bos_taurus
ENSPCAG00000005902PABPN19264.815ENSBTAG00000053753-6681.667Bos_taurus
ENSPCAG00000005902PABPN17284.360ENSBTAG00000006884PABPN17184.360Bos_taurus
ENSPCAG00000005902PABPN15048.299WBGene00003904pabp-25260.550Caenorhabditis_elegans
ENSPCAG00000005902PABPN19273.333ENSCJAG00000007960-7384.500Callithrix_jacchus
ENSPCAG00000005902PABPN15379.114ENSCJAG00000004407-7779.487Callithrix_jacchus
ENSPCAG00000005902PABPN19285.185ENSCAFG00000011482PABPN18885.185Canis_familiaris
ENSPCAG00000005902PABPN17285.308ENSCAFG00020007298-6885.308Canis_lupus_dingo
ENSPCAG00000005902PABPN17285.308ENSCAFG00020006651-6885.308Canis_lupus_dingo
ENSPCAG00000005902PABPN17284.834ENSCHIG00000012184PABPN16884.834Capra_hircus
ENSPCAG00000005902PABPN16082.584ENSTSYG00000033996BCL2L2-PABPN18780.128Carlito_syrichta
ENSPCAG00000005902PABPN19287.037ENSCPOG00000025574PABPN16984.360Cavia_porcellus
ENSPCAG00000005902PABPN19273.333ENSCCAG00000033954BCL2L2-PABPN17384.500Cebus_capucinus
ENSPCAG00000005902PABPN19273.333ENSCATG00000038536BCL2L2-PABPN17384.500Cercocebus_atys
ENSPCAG00000005902PABPN19273.897ENSCLAG00000012423PABPN16859.910Chinchilla_lanigera
ENSPCAG00000005902PABPN17283.412ENSCSAG00000016036PABPN16883.412Chlorocebus_sabaeus
ENSPCAG00000005902PABPN16671.649ENSCHOG00000004798BCL2L2-PABPN18271.649Choloepus_hoffmanni
ENSPCAG00000005902PABPN15373.077ENSCPBG00000026060-8773.077Chrysemys_picta_bellii
ENSPCAG00000005902PABPN16454.737ENSCING00000012468-8354.737Ciona_intestinalis
ENSPCAG00000005902PABPN15750.898ENSCSAVG00000002001-9248.718Ciona_savignyi
ENSPCAG00000005902PABPN16082.584ENSCANG00000009750BCL2L2-PABPN18780.128Colobus_angolensis_palliatus
ENSPCAG00000005902PABPN19673.592ENSCANG00000030980-6974.227Colobus_angolensis_palliatus
ENSPCAG00000005902PABPN19283.704ENSCGRG00001019696Pabpn18780.128Cricetulus_griseus_chok1gshd
ENSPCAG00000005902PABPN15380.128ENSCGRG00000011102Pabpn19179.195Cricetulus_griseus_crigri
ENSPCAG00000005902PABPN18459.600ENSCSEG00000008774pabpn18367.857Cynoglossus_semilaevis
ENSPCAG00000005902PABPN18256.557ENSCVAG00000003152pabpn18166.667Cyprinodon_variegatus
ENSPCAG00000005902PABPN18460.241ENSDARG00000045373pabpn18370.312Danio_rerio
ENSPCAG00000005902PABPN17285.308ENSDNOG00000023682PABPN16885.308Dasypus_novemcinctus
ENSPCAG00000005902PABPN17284.834ENSDORG00000028966-6884.834Dipodomys_ordii
ENSPCAG00000005902PABPN15357.051FBgn0005648Pabp27852.778Drosophila_melanogaster
ENSPCAG00000005902PABPN16265.217ENSEBUG00000002322pabpn17765.574Eptatretus_burgeri
ENSPCAG00000005902PABPN17285.308ENSEASG00005011716PABPN16985.308Equus_asinus_asinus
ENSPCAG00000005902PABPN17285.308ENSECAG00000011652PABPN17185.308Equus_caballus
ENSPCAG00000005902PABPN19380.952ENSEEUG00000012973-7180.000Erinaceus_europaeus
ENSPCAG00000005902PABPN18261.885ENSELUG00000022654pabpn17871.354Esox_lucius
ENSPCAG00000005902PABPN17285.308ENSFCAG00000031922PABPN16885.308Felis_catus
ENSPCAG00000005902PABPN15380.128ENSFDAG00000018381BCL2L2-PABPN18780.128Fukomys_damarensis
ENSPCAG00000005902PABPN18258.607ENSFHEG00000007215pabpn17968.229Fundulus_heteroclitus
ENSPCAG00000005902PABPN18559.761ENSGMOG00000003922pabpn16569.792Gadus_morhua
ENSPCAG00000005902PABPN16072.778ENSGALG00000052930-7560.769Gallus_gallus
ENSPCAG00000005902PABPN18259.184ENSGAFG00000017099pabpn17968.912Gambusia_affinis
ENSPCAG00000005902PABPN18458.400ENSGACG00000002167pabpn18065.517Gasterosteus_aculeatus
ENSPCAG00000005902PABPN19372.000ENSGGOG00000025919-8768.553Gorilla_gorilla
ENSPCAG00000005902PABPN19273.333ENSGGOG00000022683-7384.500Gorilla_gorilla
ENSPCAG00000005902PABPN19270.111ENSGGOG00000039675-6773.224Gorilla_gorilla
ENSPCAG00000005902PABPN18259.836ENSHBUG00000019523pabpn17969.271Haplochromis_burtoni
ENSPCAG00000005902PABPN19163.941ENSHGLG00000018588-6966.834Heterocephalus_glaber_female
ENSPCAG00000005902PABPN19287.037ENSHGLG00000002927-9279.195Heterocephalus_glaber_female
ENSPCAG00000005902PABPN15158.667ENSHGLG00000009842-8358.667Heterocephalus_glaber_female
ENSPCAG00000005902PABPN16082.584ENSHGLG00100006673-9279.195Heterocephalus_glaber_male
ENSPCAG00000005902PABPN19158.582ENSHGLG00100015565-7066.834Heterocephalus_glaber_male
ENSPCAG00000005902PABPN15274.214ENSHGLG00100018935-8873.750Heterocephalus_glaber_male
ENSPCAG00000005902PABPN18259.836ENSHCOG00000004655pabpn17969.271Hippocampus_comes
ENSPCAG00000005902PABPN16068.539ENSIPUG00000000180-7968.478Ictalurus_punctatus
ENSPCAG00000005902PABPN18260.246ENSIPUG00000008085PABPN17969.792Ictalurus_punctatus
ENSPCAG00000005902PABPN15380.128ENSSTOG00000029847BCL2L2-PABPN18780.128Ictidomys_tridecemlineatus
ENSPCAG00000005902PABPN15380.128ENSJJAG00000023507Gm205218780.128Jaculus_jaculus
ENSPCAG00000005902PABPN16669.072ENSKMAG00000018748pabpn17869.110Kryptolebias_marmoratus
ENSPCAG00000005902PABPN18460.000ENSLBEG00000027266pabpn17969.271Labrus_bergylta
ENSPCAG00000005902PABPN16071.910ENSLACG00000000646pabpn17873.889Latimeria_chalumnae
ENSPCAG00000005902PABPN16555.440ENSLOCG00000004694pabpn1l8856.186Lepisosteus_oculatus
ENSPCAG00000005902PABPN18460.400ENSLOCG00000000796pabpn16770.312Lepisosteus_oculatus
ENSPCAG00000005902PABPN16082.584ENSMFAG00000032183BCL2L2-PABPN18780.128Macaca_fascicularis
ENSPCAG00000005902PABPN16082.584ENSMMUG00000014747BCL2L2-PABPN17599.091Macaca_mulatta
ENSPCAG00000005902PABPN19768.601ENSMMUG00000048382-6469.388Macaca_mulatta
ENSPCAG00000005902PABPN19273.333ENSMNEG00000045065BCL2L2-PABPN17384.500Macaca_nemestrina
ENSPCAG00000005902PABPN15190.000ENSMNEG00000035750-7889.189Macaca_nemestrina
ENSPCAG00000005902PABPN15187.273ENSMLEG00000034623-7786.486Mandrillus_leucophaeus
ENSPCAG00000005902PABPN16082.584ENSMLEG00000043862BCL2L2-PABPN18780.128Mandrillus_leucophaeus
ENSPCAG00000005902PABPN18460.400ENSMAMG00000007979pabpn16569.271Mastacembelus_armatus
ENSPCAG00000005902PABPN18460.000ENSMZEG00005011904pabpn16469.271Maylandia_zebra
ENSPCAG00000005902PABPN19283.704ENSMAUG00000007383Gm205216684.000Mesocricetus_auratus
ENSPCAG00000005902PABPN19274.815ENSMICG00000010002BCL2L2-PABPN18672.222Microcebus_murinus
ENSPCAG00000005902PABPN19283.333ENSMOCG00000018557Gm205219079.195Microtus_ochrogaster
ENSPCAG00000005902PABPN18460.400ENSMMOG00000005405pabpn17969.792Mola_mola
ENSPCAG00000005902PABPN19285.185ENSMODG00000004535-8885.185Monodelphis_domestica
ENSPCAG00000005902PABPN18460.000ENSMALG00000019612pabpn16469.271Monopterus_albus
ENSPCAG00000005902PABPN16080.899MGP_CAROLIEiJ_G0019276Gm205215380.899Mus_caroli
ENSPCAG00000005902PABPN19282.593MGP_CAROLIEiJ_G0019277Pabpn19773.913Mus_caroli
ENSPCAG00000005902PABPN16081.461ENSMUSG00000092232Gm205215381.461Mus_musculus
ENSPCAG00000005902PABPN19282.963ENSMUSG00000022194Pabpn19773.913Mus_musculus
ENSPCAG00000005902PABPN19282.963MGP_PahariEiJ_G0030295Pabpn19674.214Mus_pahari
ENSPCAG00000005902PABPN16081.461MGP_PahariEiJ_G0030294Gm205215381.461Mus_pahari
ENSPCAG00000005902PABPN19282.963MGP_SPRETEiJ_G0020166Pabpn19773.913Mus_spretus
ENSPCAG00000005902PABPN16081.461MGP_SPRETEiJ_G0020165Gm205215381.461Mus_spretus
ENSPCAG00000005902PABPN15380.128ENSMPUG00000006775-9280.128Mustela_putorius_furo
ENSPCAG00000005902PABPN16080.337ENSMLUG00000003800-9380.337Myotis_lucifugus
ENSPCAG00000005902PABPN19567.742ENSMLUG00000028677-7179.381Myotis_lucifugus
ENSPCAG00000005902PABPN18978.409ENSMLUG00000012452-7278.924Myotis_lucifugus
ENSPCAG00000005902PABPN16082.584ENSNGAG00000019529Gm205215382.584Nannospalax_galili
ENSPCAG00000005902PABPN18460.000ENSNBRG00000023955pabpn18465.584Neolamprologus_brichardi
ENSPCAG00000005902PABPN16884.500ENSNLEG00000015007-7084.500Nomascus_leucogenys
ENSPCAG00000005902PABPN19767.596ENSNLEG00000030598-7369.500Nomascus_leucogenys
ENSPCAG00000005902PABPN19273.333ENSODEG00000003739-7075.238Octodon_degus
ENSPCAG00000005902PABPN15771.856ENSODEG00000011555-8270.513Octodon_degus
ENSPCAG00000005902PABPN19287.037ENSODEG00000002083BCL2L2-PABPN16884.360Octodon_degus
ENSPCAG00000005902PABPN18460.000ENSONIG00000008112pabpn16469.271Oreochromis_niloticus
ENSPCAG00000005902PABPN16883.085ENSOCUG00000016174PABPN17383.500Oryctolagus_cuniculus
ENSPCAG00000005902PABPN16669.744ENSORLG00000027900pabpn17869.792Oryzias_latipes
ENSPCAG00000005902PABPN16469.841ENSORLG00020004681pabpn16369.792Oryzias_latipes_hni
ENSPCAG00000005902PABPN16469.841ENSORLG00015000018pabpn17969.792Oryzias_latipes_hsok
ENSPCAG00000005902PABPN16669.231ENSOMEG00000016618pabpn16869.271Oryzias_melastigma
ENSPCAG00000005902PABPN17285.308ENSOGAG00000008710PABPN16885.308Otolemur_garnettii
ENSPCAG00000005902PABPN16082.584ENSPPAG00000028984BCL2L2-PABPN19280.128Pan_paniscus
ENSPCAG00000005902PABPN15367.949ENSPPAG00000039421-8567.949Pan_paniscus
ENSPCAG00000005902PABPN17285.308ENSPPRG00000010567PABPN16885.308Panthera_pardus
ENSPCAG00000005902PABPN15380.128ENSPTIG00000001063BCL2L2-PABPN18780.128Panthera_tigris_altaica
ENSPCAG00000005902PABPN19273.333ENSPTRG00000006167BCL2L27384.500Pan_troglodytes
ENSPCAG00000005902PABPN19271.956ENSPTRG00000047273-6672.131Pan_troglodytes
ENSPCAG00000005902PABPN19273.333ENSPANG00000021100BCL2L2-PABPN17384.500Papio_anubis
ENSPCAG00000005902PABPN19769.072ENSPANG00000023326-7889.189Papio_anubis
ENSPCAG00000005902PABPN16669.231ENSPKIG00000008144-6469.271Paramormyrops_kingsleyae
ENSPCAG00000005902PABPN15560.123ENSPKIG00000008340pabpn1l8757.609Paramormyrops_kingsleyae
ENSPCAG00000005902PABPN15772.024ENSPKIG00000018052pabpn17970.312Paramormyrops_kingsleyae
ENSPCAG00000005902PABPN18459.600ENSPMGG00000022027pabpn16769.271Periophthalmus_magnuspinnatus
ENSPCAG00000005902PABPN19283.704ENSPEMG00000008332Gm205219674.534Peromyscus_maniculatus_bairdii
ENSPCAG00000005902PABPN15762.428ENSPMAG00000006212pabpn17963.021Petromyzon_marinus
ENSPCAG00000005902PABPN19284.815ENSPCIG00000027751-8884.815Phascolarctos_cinereus
ENSPCAG00000005902PABPN18356.098ENSPFOG00000010351pabpn17867.358Poecilia_formosa
ENSPCAG00000005902PABPN18558.730ENSPLAG00000022696pabpn16568.394Poecilia_latipinna
ENSPCAG00000005902PABPN18256.327ENSPMEG00000020856pabpn17967.358Poecilia_mexicana
ENSPCAG00000005902PABPN18556.746ENSPREG00000011278pabpn17967.876Poecilia_reticulata
ENSPCAG00000005902PABPN18987.833ENSPPYG00000005663PABPN17485.308Pongo_abelii
ENSPCAG00000005902PABPN19274.815ENSPCOG00000028047BCL2L2-PABPN18672.222Propithecus_coquereli
ENSPCAG00000005902PABPN16880.500ENSPVAG00000005270PABPN16381.347Pteropus_vampyrus
ENSPCAG00000005902PABPN18259.836ENSPNYG00000013182pabpn17969.271Pundamilia_nyererei
ENSPCAG00000005902PABPN18460.800ENSPNAG00000023526pabpn17970.312Pygocentrus_nattereri
ENSPCAG00000005902PABPN15258.824ENSPNAG00000021666pabpn1l8656.180Pygocentrus_nattereri
ENSPCAG00000005902PABPN19283.333ENSRNOG00000042195Pabpn16683.500Rattus_norvegicus
ENSPCAG00000005902PABPN16082.584ENSRBIG00000040762BCL2L2-PABPN15482.584Rhinopithecus_bieti
ENSPCAG00000005902PABPN18976.894ENSRBIG00000042811-8475.622Rhinopithecus_bieti
ENSPCAG00000005902PABPN19775.779ENSRBIG00000039547-7076.289Rhinopithecus_bieti
ENSPCAG00000005902PABPN16082.584ENSRROG00000045535BCL2L2-PABPN18780.128Rhinopithecus_roxellana
ENSPCAG00000005902PABPN19975.510ENSRROG00000040409-7076.289Rhinopithecus_roxellana
ENSPCAG00000005902PABPN19171.004ENSRROG00000036409-6268.447Rhinopithecus_roxellana
ENSPCAG00000005902PABPN16076.963ENSSBOG00000026930BCL2L2-PABPN19280.128Saimiri_boliviensis_boliviensis
ENSPCAG00000005902PABPN17071.498ENSSHAG00000014841-8179.775Sarcophilus_harrisii
ENSPCAG00000005902PABPN18656.299ENSSHAG00000007707-8463.000Sarcophilus_harrisii
ENSPCAG00000005902PABPN18259.426ENSSFOG00015014718pabpn17969.271Scleropages_formosus
ENSPCAG00000005902PABPN16753.807ENSSFOG00015015833pabpn1l8356.757Scleropages_formosus
ENSPCAG00000005902PABPN16965.700ENSSFOG00015012565pabpn18268.229Scleropages_formosus
ENSPCAG00000005902PABPN18460.000ENSSMAG00000020157pabpn17969.271Scophthalmus_maximus
ENSPCAG00000005902PABPN18460.000ENSSDUG00000020582pabpn16469.271Seriola_dumerili
ENSPCAG00000005902PABPN18259.836ENSSLDG00000007118pabpn17969.271Seriola_lalandi_dorsalis
ENSPCAG00000005902PABPN15172.185ENSSPUG00000018308-8772.436Sphenodon_punctatus
ENSPCAG00000005902PABPN18460.000ENSSPAG00000021658pabpn17969.271Stegastes_partitus
ENSPCAG00000005902PABPN15641.818ENSSSCG00000038472-8240.385Sus_scrofa
ENSPCAG00000005902PABPN17285.308ENSSSCG00000002023PABPN16985.308Sus_scrofa
ENSPCAG00000005902PABPN17066.184ENSSSCG00000034805-7360.638Sus_scrofa
ENSPCAG00000005902PABPN18560.159ENSTRUG00000023664pabpn17969.792Takifugu_rubripes
ENSPCAG00000005902PABPN16669.744ENSTNIG00000005369pabpn18569.792Tetraodon_nigroviridis
ENSPCAG00000005902PABPN17285.308ENSUAMG00000024460PABPN16885.308Ursus_americanus
ENSPCAG00000005902PABPN16082.584ENSUMAG00000014288BCL2L2-PABPN15382.584Ursus_maritimus
ENSPCAG00000005902PABPN16082.584ENSVVUG00000019912BCL2L2-PABPN17181.319Vulpes_vulpes
ENSPCAG00000005902PABPN16374.595ENSXETG00000014597pabpn16277.419Xenopus_tropicalis
ENSPCAG00000005902PABPN18356.911ENSXMAG00000006196pabpn17968.394Xiphophorus_maculatus

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