EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000005931 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 46154 bases
Position: chrGeneScaffold_726:10235-56388
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005582	DUF1604	PF07713.13	2e-06	1	1
ENSPCAP00000005582	G-patch	PF01585.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005979	GPATCH1-201	2799	-	ENSPCAP00000005582	932 (aa)	-	UPI00018AF365

Gene Model

Click here to download ENSPCAG00000005931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005931	GPATCH1	93	80.517	ENSG00000076650	GPATCH1	83	79.196	Homo_sapiens
ENSPCAG00000005931	GPATCH1	93	81.873	ENSAMEG00000015575	GPATCH1	83	80.806	Ailuropoda_melanoleuca
ENSPCAG00000005931	GPATCH1	73	58.046	ENSAOCG00000006668	gpatch1	81	49.858	Amphiprion_ocellaris
ENSPCAG00000005931	GPATCH1	73	50.986	ENSAPEG00000000026	gpatch1	81	50.857	Amphiprion_percula
ENSPCAG00000005931	GPATCH1	66	50.699	ENSATEG00000014494	gpatch1	74	49.858	Anabas_testudineus
ENSPCAG00000005931	GPATCH1	77	68.601	ENSAPLG00000007584	GPATCH1	81	68.794	Anas_platyrhynchos
ENSPCAG00000005931	GPATCH1	93	80.517	ENSANAG00000027002	GPATCH1	83	79.196	Aotus_nancymaae
ENSPCAG00000005931	GPATCH1	73	49.304	ENSACLG00000024740	gpatch1	70	49.284	Astatotilapia_calliptera
ENSPCAG00000005931	GPATCH1	84	51.667	ENSAMXG00000020177	gpatch1	89	52.286	Astyanax_mexicanus
ENSPCAG00000005931	GPATCH1	83	78.897	ENSBTAG00000000721	GPATCH1	83	78.810	Bos_taurus
ENSPCAG00000005931	GPATCH1	93	80.517	ENSCJAG00000000684	GPATCH1	83	78.960	Callithrix_jacchus
ENSPCAG00000005931	GPATCH1	93	82.107	ENSCAFG00000007457	GPATCH1	69	81.087	Canis_familiaris
ENSPCAG00000005931	GPATCH1	86	81.306	ENSCAFG00020019731	GPATCH1	83	81.087	Canis_lupus_dingo
ENSPCAG00000005931	GPATCH1	91	81.466	ENSCHIG00000019626	GPATCH1	83	80.952	Capra_hircus
ENSPCAG00000005931	GPATCH1	85	75.850	ENSCAPG00000008827	GPATCH1	78	75.265	Cavia_aperea
ENSPCAG00000005931	GPATCH1	85	80.420	ENSCPOG00000024477	GPATCH1	81	80.000	Cavia_porcellus
ENSPCAG00000005931	GPATCH1	93	80.517	ENSCCAG00000024676	GPATCH1	83	79.433	Cebus_capucinus
ENSPCAG00000005931	GPATCH1	93	80.915	ENSCATG00000043637	GPATCH1	83	79.669	Cercocebus_atys
ENSPCAG00000005931	GPATCH1	84	79.381	ENSCLAG00000003395	-	79	78.929	Chinchilla_lanigera
ENSPCAG00000005931	GPATCH1	91	81.113	ENSCSAG00000004743	GPATCH1	82	79.905	Chlorocebus_sabaeus
ENSPCAG00000005931	GPATCH1	85	71.825	ENSCHOG00000012865	GPATCH1	80	76.886	Choloepus_hoffmanni
ENSPCAG00000005931	GPATCH1	70	78.992	ENSCPBG00000000666	GPATCH1	77	79.295	Chrysemys_picta_bellii
ENSPCAG00000005931	GPATCH1	66	37.113	ENSCING00000012518	-	74	38.636	Ciona_intestinalis
ENSPCAG00000005931	GPATCH1	82	83.005	ENSCANG00000012540	GPATCH1	80	82.209	Colobus_angolensis_palliatus
ENSPCAG00000005931	GPATCH1	85	79.381	ENSCGRG00001016736	Gpatch1	85	78.929	Cricetulus_griseus_chok1gshd
ENSPCAG00000005931	GPATCH1	81	61.795	ENSCGRG00000005069	Gpatch1	76	60.071	Cricetulus_griseus_crigri
ENSPCAG00000005931	GPATCH1	73	41.551	ENSCSEG00000019456	-	81	41.714	Cynoglossus_semilaevis
ENSPCAG00000005931	GPATCH1	91	48.295	ENSDARG00000033418	gpatch1	85	47.863	Danio_rerio
ENSPCAG00000005931	GPATCH1	84	76.010	ENSDNOG00000005291	GPATCH1	86	76.123	Dasypus_novemcinctus
ENSPCAG00000005931	GPATCH1	86	74.944	ENSDORG00000012546	Gpatch1	88	74.882	Dipodomys_ordii
ENSPCAG00000005931	GPATCH1	90	68.560	ENSETEG00000003626	GPATCH1	84	68.322	Echinops_telfairi
ENSPCAG00000005931	GPATCH1	79	33.624	ENSEBUG00000011286	gpatch1	75	34.551	Eptatretus_burgeri
ENSPCAG00000005931	GPATCH1	83	77.053	ENSEASG00005021162	GPATCH1	84	78.075	Equus_asinus_asinus
ENSPCAG00000005931	GPATCH1	86	79.233	ENSECAG00000022743	GPATCH1	80	78.673	Equus_caballus
ENSPCAG00000005931	GPATCH1	70	90.789	ENSEEUG00000012925	GPATCH1	69	90.769	Erinaceus_europaeus
ENSPCAG00000005931	GPATCH1	85	47.922	ENSELUG00000018195	gpatch1	82	49.003	Esox_lucius
ENSPCAG00000005931	GPATCH1	93	80.080	ENSFCAG00000014917	GPATCH1	83	78.910	Felis_catus
ENSPCAG00000005931	GPATCH1	91	61.064	ENSFALG00000007821	GPATCH1	81	60.399	Ficedula_albicollis
ENSPCAG00000005931	GPATCH1	84	79.725	ENSFDAG00000003871	GPATCH1	78	79.286	Fukomys_damarensis
ENSPCAG00000005931	GPATCH1	84	61.345	ENSGALG00000004839	GPATCH1	84	60.795	Gallus_gallus
ENSPCAG00000005931	GPATCH1	73	46.547	ENSGACG00000017544	gpatch1	85	44.444	Gasterosteus_aculeatus
ENSPCAG00000005931	GPATCH1	92	60.989	ENSGAGG00000010067	GPATCH1	82	60.623	Gopherus_agassizii
ENSPCAG00000005931	GPATCH1	85	81.100	ENSGGOG00000010862	GPATCH1	77	80.714	Gorilla_gorilla
ENSPCAG00000005931	GPATCH1	73	49.582	ENSHBUG00000023462	gpatch1	81	49.570	Haplochromis_burtoni
ENSPCAG00000005931	GPATCH1	93	74.405	ENSHGLG00000009334	GPATCH1	83	73.113	Heterocephalus_glaber_female
ENSPCAG00000005931	GPATCH1	93	74.405	ENSHGLG00100018074	GPATCH1	83	73.113	Heterocephalus_glaber_male
ENSPCAG00000005931	GPATCH1	85	51.111	ENSIPUG00000014977	gpatch1	81	51.143	Ictalurus_punctatus
ENSPCAG00000005931	GPATCH1	91	79.563	ENSSTOG00000003720	GPATCH1	83	77.830	Ictidomys_tridecemlineatus
ENSPCAG00000005931	GPATCH1	84	72.076	ENSJJAG00000023765	Gpatch1	83	72.038	Jaculus_jaculus
ENSPCAG00000005931	GPATCH1	81	50.986	ENSKMAG00000017950	gpatch1	76	50.857	Kryptolebias_marmoratus
ENSPCAG00000005931	GPATCH1	76	65.292	ENSLACG00000008130	GPATCH1	77	72.247	Latimeria_chalumnae
ENSPCAG00000005931	GPATCH1	74	54.144	ENSLOCG00000001800	gpatch1	81	54.261	Lepisosteus_oculatus
ENSPCAG00000005931	GPATCH1	90	84.458	ENSLAFG00000013589	GPATCH1	85	83.879	Loxodonta_africana
ENSPCAG00000005931	GPATCH1	83	78.417	ENSMFAG00000034418	GPATCH1	87	78.417	Macaca_fascicularis
ENSPCAG00000005931	GPATCH1	93	80.556	ENSMMUG00000011790	GPATCH1	83	79.245	Macaca_mulatta
ENSPCAG00000005931	GPATCH1	93	80.716	ENSMNEG00000045084	GPATCH1	83	79.433	Macaca_nemestrina
ENSPCAG00000005931	GPATCH1	87	88.038	ENSMLEG00000043840	GPATCH1	81	87.879	Mandrillus_leucophaeus
ENSPCAG00000005931	GPATCH1	73	49.438	ENSMZEG00005001926	gpatch1	71	49.284	Maylandia_zebra
ENSPCAG00000005931	GPATCH1	83	61.408	ENSMGAG00000005775	GPATCH1	82	60.857	Meleagris_gallopavo
ENSPCAG00000005931	GPATCH1	78	72.917	ENSMICG00000004829	GPATCH1	72	76.683	Microcebus_murinus
ENSPCAG00000005931	GPATCH1	92	70.741	ENSMOCG00000000174	Gpatch1	84	70.258	Microtus_ochrogaster
ENSPCAG00000005931	GPATCH1	73	46.910	ENSMMOG00000002140	gpatch1	77	46.927	Mola_mola
ENSPCAG00000005931	GPATCH1	84	68.144	ENSMODG00000012226	GPATCH1	82	67.806	Monodelphis_domestica
ENSPCAG00000005931	GPATCH1	73	49.435	ENSMALG00000014386	gpatch1	81	49.284	Monopterus_albus
ENSPCAG00000005931	GPATCH1	93	74.900	ENSMUSG00000063808	Gpatch1	87	74.645	Mus_musculus
ENSPCAG00000005931	GPATCH1	93	74.603	MGP_PahariEiJ_G0012816	Gpatch1	87	74.292	Mus_pahari
ENSPCAG00000005931	GPATCH1	93	74.751	MGP_SPRETEiJ_G0030681	Gpatch1	87	74.292	Mus_spretus
ENSPCAG00000005931	GPATCH1	93	79.880	ENSMPUG00000007658	GPATCH1	83	79.384	Mustela_putorius_furo
ENSPCAG00000005931	GPATCH1	91	78.884	ENSMLUG00000012161	GPATCH1	83	79.384	Myotis_lucifugus
ENSPCAG00000005931	GPATCH1	93	74.104	ENSNGAG00000012455	Gpatch1	83	74.171	Nannospalax_galili
ENSPCAG00000005931	GPATCH1	93	80.517	ENSNLEG00000007659	GPATCH1	83	79.433	Nomascus_leucogenys
ENSPCAG00000005931	GPATCH1	69	81.303	ENSMEUG00000015174	GPATCH1	69	81.143	Notamacropus_eugenii
ENSPCAG00000005931	GPATCH1	92	70.974	ENSODEG00000007103	GPATCH1	83	70.465	Octodon_degus
ENSPCAG00000005931	GPATCH1	74	49.861	ENSONIG00000003302	gpatch1	82	49.858	Oreochromis_niloticus
ENSPCAG00000005931	GPATCH1	92	67.227	ENSOANG00000012732	GPATCH1	82	66.763	Ornithorhynchus_anatinus
ENSPCAG00000005931	GPATCH1	93	80.080	ENSOCUG00000015905	GPATCH1	83	79.858	Oryctolagus_cuniculus
ENSPCAG00000005931	GPATCH1	75	49.153	ENSORLG00000018706	gpatch1	72	49.296	Oryzias_latipes
ENSPCAG00000005931	GPATCH1	75	48.148	ENSOMEG00000022688	gpatch1	73	50.142	Oryzias_melastigma
ENSPCAG00000005931	GPATCH1	76	80.516	ENSOGAG00000004016	GPATCH1	88	80.516	Otolemur_garnettii
ENSPCAG00000005931	GPATCH1	83	80.096	ENSOARG00000004365	GPATCH1	73	90.308	Ovis_aries
ENSPCAG00000005931	GPATCH1	93	80.318	ENSPPAG00000020990	GPATCH1	83	78.960	Pan_paniscus
ENSPCAG00000005931	GPATCH1	93	81.275	ENSPPRG00000017245	GPATCH1	83	80.095	Panthera_pardus
ENSPCAG00000005931	GPATCH1	93	82.669	ENSPTIG00000019649	GPATCH1	83	81.754	Panthera_tigris_altaica
ENSPCAG00000005931	GPATCH1	93	80.119	ENSPTRG00000010803	GPATCH1	83	78.723	Pan_troglodytes
ENSPCAG00000005931	GPATCH1	84	79.335	ENSPANG00000012374	GPATCH1	87	79.433	Papio_anubis
ENSPCAG00000005931	GPATCH1	73	50.704	ENSPKIG00000020745	gpatch1	71	51.762	Paramormyrops_kingsleyae
ENSPCAG00000005931	GPATCH1	92	60.724	ENSPSIG00000013433	GPATCH1	82	60.632	Pelodiscus_sinensis
ENSPCAG00000005931	GPATCH1	93	73.307	ENSPEMG00000000636	Gpatch1	83	72.986	Peromyscus_maniculatus_bairdii
ENSPCAG00000005931	GPATCH1	76	78.276	ENSPCIG00000021003	GPATCH1	80	77.857	Phascolarctos_cinereus
ENSPCAG00000005931	GPATCH1	66	43.629	ENSPREG00000008264	gpatch1	85	41.341	Poecilia_reticulata
ENSPCAG00000005931	GPATCH1	90	80.716	ENSPPYG00000009824	GPATCH1	84	79.669	Pongo_abelii
ENSPCAG00000005931	GPATCH1	85	71.745	ENSPCOG00000009674	GPATCH1	87	71.143	Propithecus_coquereli
ENSPCAG00000005931	GPATCH1	83	84.071	ENSPVAG00000017767	GPATCH1	75	83.389	Pteropus_vampyrus
ENSPCAG00000005931	GPATCH1	74	49.584	ENSPNYG00000018189	gpatch1	79	49.857	Pundamilia_nyererei
ENSPCAG00000005931	GPATCH1	83	51.124	ENSPNAG00000013187	gpatch1	84	50.571	Pygocentrus_nattereri
ENSPCAG00000005931	GPATCH1	93	74.502	ENSRNOG00000011584	Gpatch1	83	74.645	Rattus_norvegicus
ENSPCAG00000005931	GPATCH1	79	87.395	ENSRBIG00000034723	GPATCH1	73	87.225	Rhinopithecus_bieti
ENSPCAG00000005931	GPATCH1	93	81.511	ENSRROG00000024428	GPATCH1	83	80.378	Rhinopithecus_roxellana
ENSPCAG00000005931	GPATCH1	93	78.529	ENSSBOG00000034650	GPATCH1	83	79.433	Saimiri_boliviensis_boliviensis
ENSPCAG00000005931	GPATCH1	92	67.867	ENSSHAG00000016016	GPATCH1	83	67.521	Sarcophilus_harrisii
ENSPCAG00000005931	GPATCH1	73	50.556	ENSSFOG00015011535	gpatch1	80	51.143	Scleropages_formosus
ENSPCAG00000005931	GPATCH1	68	51.079	ENSSMAG00000002883	gpatch1	77	48.433	Scophthalmus_maximus
ENSPCAG00000005931	GPATCH1	73	47.790	ENSSDUG00000007444	gpatch1	81	46.779	Seriola_dumerili
ENSPCAG00000005931	GPATCH1	73	48.315	ENSSLDG00000002856	gpatch1	78	49.288	Seriola_lalandi_dorsalis
ENSPCAG00000005931	GPATCH1	65	78.689	ENSSARG00000004108	GPATCH1	64	78.689	Sorex_araneus
ENSPCAG00000005931	GPATCH1	84	78.520	ENSSSCG00000002865	GPATCH1	86	78.436	Sus_scrofa
ENSPCAG00000005931	GPATCH1	84	61.345	ENSTGUG00000009401	GPATCH1	82	60.795	Taeniopygia_guttata
ENSPCAG00000005931	GPATCH1	73	46.667	ENSTRUG00000005785	-	81	45.714	Takifugu_rubripes
ENSPCAG00000005931	GPATCH1	73	46.667	ENSTRUG00000025081	gpatch1	81	45.714	Takifugu_rubripes
ENSPCAG00000005931	GPATCH1	60	53.137	ENSTNIG00000002554	gpatch1	80	52.650	Tetraodon_nigroviridis
ENSPCAG00000005931	GPATCH1	51	88.095	ENSTBEG00000007750	-	66	87.097	Tupaia_belangeri
ENSPCAG00000005931	GPATCH1	91	80.287	ENSTTRG00000012221	GPATCH1	82	79.048	Tursiops_truncatus
ENSPCAG00000005931	GPATCH1	79	87.395	ENSUMAG00000014645	GPATCH1	86	79.301	Ursus_maritimus
ENSPCAG00000005931	GPATCH1	72	89.474	ENSVPAG00000010313	GPATCH1	76	89.231	Vicugna_pacos
ENSPCAG00000005931	GPATCH1	86	80.856	ENSVVUG00000016572	GPATCH1	83	80.615	Vulpes_vulpes
ENSPCAG00000005931	GPATCH1	92	50.416	ENSXETG00000018276	gpatch1	79	69.163	Xenopus_tropicalis