EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000005962 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 35941 bases
Position: chrscaffold_9383:15-35955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005590	KH_1	PF00013.29	2.2e-06	1	1
ENSPCAP00000005590	DEAD	PF00270.29	8.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000005988	-	1932	-	ENSPCAP00000005590	643 (aa)	-	UPI00018AE529

Gene Model

Click here to download ENSPCAG00000005962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000005962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000005962	-	55	30.899	ENSPCAG00000004767	DDX6	72	30.899
ENSPCAG00000005962	-	68	39.331	ENSPCAG00000002016	DDX23	57	39.331
ENSPCAG00000005962	-	57	31.267	ENSPCAG00000010163	EIF4A2	89	31.267
ENSPCAG00000005962	-	62	36.634	ENSPCAG00000014921	DDX59	64	36.364
ENSPCAG00000005962	-	57	40.415	ENSPCAG00000007534	DDX3X	62	39.109
ENSPCAG00000005962	-	69	44.989	ENSPCAG00000011672	DDX17	61	44.812
ENSPCAG00000005962	-	53	31.492	ENSPCAG00000014127	DDX55	59	31.768
ENSPCAG00000005962	-	53	35.876	ENSPCAG00000002310	DDX49	72	35.876
ENSPCAG00000005962	-	52	34.593	ENSPCAG00000005814	DDX52	57	34.393
ENSPCAG00000005962	-	54	36.885	ENSPCAG00000016697	DDX21	51	36.885
ENSPCAG00000005962	-	69	34.071	ENSPCAG00000002474	DDX42	51	34.437
ENSPCAG00000005962	-	54	40.503	ENSPCAG00000002675	DDX4	50	40.503
ENSPCAG00000005962	-	57	33.065	ENSPCAG00000012966	EIF4A1	89	33.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000005962	-	99	80.308	ENSAMEG00000007851	-	99	80.308	Ailuropoda_melanoleuca
ENSPCAG00000005962	-	99	75.232	ENSBTAG00000021814	-	99	75.116	Bos_taurus
ENSPCAG00000005962	-	99	75.466	ENSCAFG00020002717	-	99	75.311	Canis_lupus_dingo
ENSPCAG00000005962	-	99	80.341	ENSCAFG00020010029	-	99	80.186	Canis_lupus_dingo
ENSPCAG00000005962	-	99	75.697	ENSCHIG00000017351	-	99	75.425	Capra_hircus
ENSPCAG00000005962	-	78	77.645	ENSCAPG00000004247	-	99	77.645	Cavia_aperea
ENSPCAG00000005962	-	99	79.721	ENSCPOG00000003991	-	99	79.721	Cavia_porcellus
ENSPCAG00000005962	-	99	72.334	ENSCLAG00000010261	-	99	72.488	Chinchilla_lanigera
ENSPCAG00000005962	-	61	82.301	ENSCHOG00000003450	-	70	82.301	Choloepus_hoffmanni
ENSPCAG00000005962	-	99	81.522	ENSCGRG00001001145	Ddx43	99	81.056	Cricetulus_griseus_chok1gshd
ENSPCAG00000005962	-	87	85.258	ENSCGRG00000010217	Ddx43	99	85.258	Cricetulus_griseus_crigri
ENSPCAG00000005962	-	99	83.333	ENSDNOG00000017589	-	99	83.205	Dasypus_novemcinctus
ENSPCAG00000005962	-	99	81.550	ENSDORG00000030010	Ddx43	99	81.550	Dipodomys_ordii
ENSPCAG00000005962	-	80	95.000	ENSETEG00000001887	-	80	95.000	Echinops_telfairi
ENSPCAG00000005962	-	99	82.636	ENSEASG00005004346	-	88	82.016	Equus_asinus_asinus
ENSPCAG00000005962	-	99	82.481	ENSECAG00000017971	DDX43	97	82.016	Equus_caballus
ENSPCAG00000005962	-	99	77.090	ENSFCAG00000031631	-	99	76.935	Felis_catus
ENSPCAG00000005962	-	87	81.705	ENSHGLG00000001118	-	99	81.705	Heterocephalus_glaber_female
ENSPCAG00000005962	-	90	80.617	ENSHGLG00100011895	-	99	76.198	Heterocephalus_glaber_male
ENSPCAG00000005962	-	87	75.133	ENSSTOG00000032538	-	99	75.133	Ictidomys_tridecemlineatus
ENSPCAG00000005962	-	99	80.620	ENSJJAG00000014184	Ddx43	99	80.620	Jaculus_jaculus
ENSPCAG00000005962	-	93	91.542	ENSLAFG00000012755	-	99	91.472	Loxodonta_africana
ENSPCAG00000005962	-	99	80.590	ENSMAUG00000001441	Ddx43	99	80.124	Mesocricetus_auratus
ENSPCAG00000005962	-	99	79.846	ENSMOCG00000012956	Ddx43	99	80.093	Microtus_ochrogaster
ENSPCAG00000005962	-	99	81.550	MGP_CAROLIEiJ_G0032467	Ddx43	99	80.930	Mus_caroli
ENSPCAG00000005962	-	99	81.705	ENSMUSG00000070291	Ddx43	99	81.085	Mus_musculus
ENSPCAG00000005962	-	78	88.095	MGP_PahariEiJ_G0015333	Ddx43	99	88.095	Mus_pahari
ENSPCAG00000005962	-	99	81.705	MGP_SPRETEiJ_G0033607	Ddx43	99	81.085	Mus_spretus
ENSPCAG00000005962	-	99	81.298	ENSMPUG00000004342	-	99	80.989	Mustela_putorius_furo
ENSPCAG00000005962	-	99	82.743	ENSMLUG00000017604	-	99	82.743	Myotis_lucifugus
ENSPCAG00000005962	-	99	79.845	ENSNGAG00000015102	Ddx43	99	80.465	Nannospalax_galili
ENSPCAG00000005962	-	74	83.929	ENSOPRG00000013523	-	85	83.929	Ochotona_princeps
ENSPCAG00000005962	-	84	81.250	ENSODEG00000016207	-	99	81.250	Octodon_degus
ENSPCAG00000005962	-	99	75.155	ENSOCUG00000006338	-	99	75.155	Oryctolagus_cuniculus
ENSPCAG00000005962	-	98	64.127	ENSOCUG00000025811	-	97	63.810	Oryctolagus_cuniculus
ENSPCAG00000005962	-	99	75.889	ENSOARG00000010873	-	99	75.425	Ovis_aries
ENSPCAG00000005962	-	99	77.399	ENSPTIG00000017842	-	99	77.245	Panthera_tigris_altaica
ENSPCAG00000005962	-	87	85.790	ENSPEMG00000023986	Ddx43	99	85.790	Peromyscus_maniculatus_bairdii
ENSPCAG00000005962	-	87	87.943	ENSPVAG00000012718	-	99	87.943	Pteropus_vampyrus
ENSPCAG00000005962	-	99	81.734	ENSRNOG00000050868	Ddx43	99	81.115	Rattus_norvegicus
ENSPCAG00000005962	-	85	86.157	ENSSARG00000013493	-	100	86.157	Sorex_araneus
ENSPCAG00000005962	-	99	76.507	ENSSSCG00000004287	-	99	76.316	Sus_scrofa
ENSPCAG00000005962	-	87	72.776	ENSTTRG00000001488	-	99	72.776	Tursiops_truncatus
ENSPCAG00000005962	-	83	78.026	ENSUAMG00000012894	-	82	77.881	Ursus_americanus
ENSPCAG00000005962	-	99	80.431	ENSUMAG00000012291	-	99	80.431	Ursus_maritimus
ENSPCAG00000005962	-	94	71.334	ENSVPAG00000004969	-	99	71.334	Vicugna_pacos
ENSPCAG00000005962	-	99	79.876	ENSVVUG00000013908	-	99	79.721	Vulpes_vulpes