EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000006208 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 89570 bases
Position: chrGeneScaffold_351:27913-117482
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005869	R3H	PF01424.22	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006281	R3HDM1-201	3288	-	ENSPCAP00000005869	1095 (aa)	-	UPI00018AFC1C

Gene Model

Click here to download ENSPCAG00000006208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000006208	R3HDM1	72	63.406	ENSPCAG00000014642	R3HDM2	81	65.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006208	R3HDM1	100	81.670	ENSG00000048991	R3HDM1	99	87.879	Homo_sapiens
ENSPCAG00000006208	R3HDM1	77	60.534	ENSAPOG00000020850	r3hdm1	84	59.821	Acanthochromis_polyacanthus
ENSPCAG00000006208	R3HDM1	100	82.230	ENSAMEG00000014886	R3HDM1	100	82.684	Ailuropoda_melanoleuca
ENSPCAG00000006208	R3HDM1	77	60.831	ENSAOCG00000005192	r3hdm1	86	60.119	Amphiprion_ocellaris
ENSPCAG00000006208	R3HDM1	77	54.762	ENSAPEG00000016108	r3hdm1	86	54.030	Amphiprion_percula
ENSPCAG00000006208	R3HDM1	77	54.030	ENSATEG00000000232	r3hdm1	87	54.192	Anabas_testudineus
ENSPCAG00000006208	R3HDM1	100	68.841	ENSAPLG00000015231	R3HDM1	100	68.297	Anas_platyrhynchos
ENSPCAG00000006208	R3HDM1	100	66.374	ENSACAG00000001676	R3HDM1	100	67.252	Anolis_carolinensis
ENSPCAG00000006208	R3HDM1	100	81.522	ENSANAG00000035334	R3HDM1	100	82.065	Aotus_nancymaae
ENSPCAG00000006208	R3HDM1	68	69.130	ENSACLG00000027282	r3hdm1	81	69.432	Astatotilapia_calliptera
ENSPCAG00000006208	R3HDM1	74	73.305	ENSAMXG00000003536	r3hdm1	84	70.881	Astyanax_mexicanus
ENSPCAG00000006208	R3HDM1	88	69.118	ENSAMXG00000012861	R3HDM1	94	69.322	Astyanax_mexicanus
ENSPCAG00000006208	R3HDM1	100	79.259	ENSBTAG00000013302	R3HDM1	100	79.259	Bos_taurus
ENSPCAG00000006208	R3HDM1	100	81.579	ENSCJAG00000011718	R3HDM1	100	82.123	Callithrix_jacchus
ENSPCAG00000006208	R3HDM1	100	82.412	ENSCAFG00000005075	R3HDM1	100	82.865	Canis_familiaris
ENSPCAG00000006208	R3HDM1	100	82.486	ENSCAFG00020016119	R3HDM1	100	82.940	Canis_lupus_dingo
ENSPCAG00000006208	R3HDM1	93	91.824	ENSCHIG00000020851	R3HDM1	94	91.824	Capra_hircus
ENSPCAG00000006208	R3HDM1	100	76.538	ENSCPOG00000012784	R3HDM1	100	83.389	Cavia_porcellus
ENSPCAG00000006208	R3HDM1	100	81.397	ENSCCAG00000027199	R3HDM1	100	81.942	Cebus_capucinus
ENSPCAG00000006208	R3HDM1	100	81.233	ENSCATG00000023642	R3HDM1	100	81.868	Cercocebus_atys
ENSPCAG00000006208	R3HDM1	100	76.781	ENSCLAG00000007962	R3HDM1	100	86.047	Chinchilla_lanigera
ENSPCAG00000006208	R3HDM1	100	77.729	ENSCSAG00000016356	R3HDM1	100	79.420	Chlorocebus_sabaeus
ENSPCAG00000006208	R3HDM1	76	90.312	ENSCHOG00000013638	R3HDM1	79	90.312	Choloepus_hoffmanni
ENSPCAG00000006208	R3HDM1	81	90.256	ENSCPBG00000009645	R3HDM1	94	90.710	Chrysemys_picta_bellii
ENSPCAG00000006208	R3HDM1	100	80.978	ENSCANG00000034748	R3HDM1	100	81.612	Colobus_angolensis_palliatus
ENSPCAG00000006208	R3HDM1	99	76.876	ENSCGRG00001012357	R3hdm1	97	76.876	Cricetulus_griseus_chok1gshd
ENSPCAG00000006208	R3HDM1	99	79.163	ENSCGRG00000012080	R3hdm1	100	87.375	Cricetulus_griseus_crigri
ENSPCAG00000006208	R3HDM1	68	55.060	ENSCSEG00000008944	r3hdm1	74	65.022	Cynoglossus_semilaevis
ENSPCAG00000006208	R3HDM1	76	60.237	ENSCVAG00000007582	r3hdm1	93	59.226	Cyprinodon_variegatus
ENSPCAG00000006208	R3HDM1	100	78.643	ENSDNOG00000000771	R3HDM1	100	78.371	Dasypus_novemcinctus
ENSPCAG00000006208	R3HDM1	85	91.185	ENSETEG00000013606	R3HDM1	92	88.011	Echinops_telfairi
ENSPCAG00000006208	R3HDM1	90	93.030	ENSEASG00005007392	R3HDM1	98	93.313	Equus_asinus_asinus
ENSPCAG00000006208	R3HDM1	93	92.767	ENSECAG00000019114	R3HDM1	98	93.313	Equus_caballus
ENSPCAG00000006208	R3HDM1	91	76.087	ENSEEUG00000012589	R3HDM1	91	76.087	Erinaceus_europaeus
ENSPCAG00000006208	R3HDM1	81	68.821	ENSELUG00000004909	R3HDM1	93	68.000	Esox_lucius
ENSPCAG00000006208	R3HDM1	69	80.105	ENSELUG00000014413	r3hdm1	80	80.526	Esox_lucius
ENSPCAG00000006208	R3HDM1	93	93.396	ENSFCAG00000027113	R3HDM1	98	94.225	Felis_catus
ENSPCAG00000006208	R3HDM1	85	80.000	ENSFALG00000013731	R3HDM1	82	80.000	Ficedula_albicollis
ENSPCAG00000006208	R3HDM1	100	76.450	ENSFDAG00000016478	R3HDM1	100	86.711	Fukomys_damarensis
ENSPCAG00000006208	R3HDM1	75	60.237	ENSFHEG00000018713	r3hdm1	93	59.226	Fundulus_heteroclitus
ENSPCAG00000006208	R3HDM1	79	87.671	ENSGALG00000012246	R3HDM1	97	87.671	Gallus_gallus
ENSPCAG00000006208	R3HDM1	67	70.485	ENSGAFG00000006203	r3hdm1	87	70.796	Gambusia_affinis
ENSPCAG00000006208	R3HDM1	75	66.917	ENSGACG00000014925	r3hdm1	93	67.181	Gasterosteus_aculeatus
ENSPCAG00000006208	R3HDM1	93	79.635	ENSGAGG00000007840	R3HDM1	94	79.635	Gopherus_agassizii
ENSPCAG00000006208	R3HDM1	100	81.686	ENSGGOG00000008156	R3HDM1	100	82.321	Gorilla_gorilla
ENSPCAG00000006208	R3HDM1	100	76.808	ENSHGLG00000015718	R3HDM1	100	85.714	Heterocephalus_glaber_female
ENSPCAG00000006208	R3HDM1	100	76.543	ENSHGLG00100003184	-	100	85.382	Heterocephalus_glaber_male
ENSPCAG00000006208	R3HDM1	94	65.625	ENSHGLG00100015374	-	93	66.051	Heterocephalus_glaber_male
ENSPCAG00000006208	R3HDM1	63	66.968	ENSHCOG00000013366	r3hdm1	79	66.968	Hippocampus_comes
ENSPCAG00000006208	R3HDM1	80	72.881	ENSIPUG00000013629	r3hdm1	83	72.881	Ictalurus_punctatus
ENSPCAG00000006208	R3HDM1	66	71.053	ENSIPUG00000001676	R3HDM1	94	59.908	Ictalurus_punctatus
ENSPCAG00000006208	R3HDM1	100	81.052	ENSSTOG00000007572	R3HDM1	100	86.711	Ictidomys_tridecemlineatus
ENSPCAG00000006208	R3HDM1	94	73.887	ENSLACG00000005334	R3HDM1	95	70.321	Latimeria_chalumnae
ENSPCAG00000006208	R3HDM1	89	72.997	ENSLOCG00000001641	r3hdm1	95	64.439	Lepisosteus_oculatus
ENSPCAG00000006208	R3HDM1	89	94.909	ENSLAFG00000009065	R3HDM1	91	95.255	Loxodonta_africana
ENSPCAG00000006208	R3HDM1	94	92.121	ENSMFAG00000030331	R3HDM1	93	92.705	Macaca_fascicularis
ENSPCAG00000006208	R3HDM1	100	81.397	ENSMMUG00000009844	R3HDM1	100	82.033	Macaca_mulatta
ENSPCAG00000006208	R3HDM1	94	92.121	ENSMNEG00000027793	R3HDM1	93	92.705	Macaca_nemestrina
ENSPCAG00000006208	R3HDM1	100	81.505	ENSMLEG00000043189	R3HDM1	100	82.140	Mandrillus_leucophaeus
ENSPCAG00000006208	R3HDM1	82	59.050	ENSMAMG00000004532	r3hdm1	93	59.226	Mastacembelus_armatus
ENSPCAG00000006208	R3HDM1	68	69.130	ENSMZEG00005003157	r3hdm1	82	69.432	Maylandia_zebra
ENSPCAG00000006208	R3HDM1	100	67.877	ENSMGAG00000012461	R3HDM1	100	67.423	Meleagris_gallopavo
ENSPCAG00000006208	R3HDM1	100	76.579	ENSMAUG00000010315	R3hdm1	100	87.708	Mesocricetus_auratus
ENSPCAG00000006208	R3HDM1	100	80.344	ENSMICG00000005900	-	100	80.797	Microcebus_murinus
ENSPCAG00000006208	R3HDM1	89	80.851	ENSMICG00000042655	-	92	81.098	Microcebus_murinus
ENSPCAG00000006208	R3HDM1	85	76.953	ENSMODG00000000923	R3HDM1	91	75.781	Monodelphis_domestica
ENSPCAG00000006208	R3HDM1	94	58.284	ENSMALG00000009000	r3hdm1	92	58.754	Monopterus_albus
ENSPCAG00000006208	R3HDM1	100	75.947	MGP_CAROLIEiJ_G0014543	R3hdm1	100	86.711	Mus_caroli
ENSPCAG00000006208	R3HDM1	100	75.947	ENSMUSG00000056211	R3hdm1	100	86.711	Mus_musculus
ENSPCAG00000006208	R3HDM1	100	75.926	MGP_PahariEiJ_G0027779	R3hdm1	100	87.000	Mus_pahari
ENSPCAG00000006208	R3HDM1	100	76.123	MGP_SPRETEiJ_G0015350	R3hdm1	100	86.711	Mus_spretus
ENSPCAG00000006208	R3HDM1	100	82.198	ENSMPUG00000002412	R3HDM1	100	82.561	Mustela_putorius_furo
ENSPCAG00000006208	R3HDM1	94	92.424	ENSMLUG00000013824	R3HDM1	100	80.922	Myotis_lucifugus
ENSPCAG00000006208	R3HDM1	100	81.596	ENSNLEG00000008622	R3HDM1	100	82.230	Nomascus_leucogenys
ENSPCAG00000006208	R3HDM1	89	70.113	ENSMEUG00000011784	R3HDM1	100	70.113	Notamacropus_eugenii
ENSPCAG00000006208	R3HDM1	100	75.440	ENSODEG00000008607	R3HDM1	100	86.711	Octodon_degus
ENSPCAG00000006208	R3HDM1	88	65.714	ENSONIG00000012017	r3hdm1	91	66.923	Oreochromis_niloticus
ENSPCAG00000006208	R3HDM1	100	70.407	ENSOANG00000007987	R3HDM1	100	70.679	Ornithorhynchus_anatinus
ENSPCAG00000006208	R3HDM1	89	79.451	ENSOCUG00000017366	R3HDM1	98	79.552	Oryctolagus_cuniculus
ENSPCAG00000006208	R3HDM1	74	53.571	ENSORLG00000004297	r3hdm1	80	69.298	Oryzias_latipes
ENSPCAG00000006208	R3HDM1	66	69.298	ENSORLG00015017355	r3hdm1	81	69.298	Oryzias_latipes_hsok
ENSPCAG00000006208	R3HDM1	95	91.281	ENSOGAG00000003136	R3HDM1	95	91.281	Otolemur_garnettii
ENSPCAG00000006208	R3HDM1	100	81.711	ENSOARG00000010788	R3HDM1	100	81.347	Ovis_aries
ENSPCAG00000006208	R3HDM1	100	81.538	ENSPPAG00000027858	R3HDM1	100	82.081	Pan_paniscus
ENSPCAG00000006208	R3HDM1	100	83.076	ENSPPRG00000002626	R3HDM1	100	83.076	Panthera_pardus
ENSPCAG00000006208	R3HDM1	100	82.985	ENSPTIG00000016581	R3HDM1	100	82.985	Panthera_tigris_altaica
ENSPCAG00000006208	R3HDM1	100	81.612	ENSPTRG00000012494	R3HDM1	100	82.156	Pan_troglodytes
ENSPCAG00000006208	R3HDM1	100	81.414	ENSPANG00000026448	R3HDM1	100	82.049	Papio_anubis
ENSPCAG00000006208	R3HDM1	76	75.847	ENSPKIG00000004328	r3hdm1	82	76.170	Paramormyrops_kingsleyae
ENSPCAG00000006208	R3HDM1	93	80.303	ENSPSIG00000012915	R3HDM1	100	67.786	Pelodiscus_sinensis
ENSPCAG00000006208	R3HDM1	100	76.916	ENSPEMG00000015187	R3hdm1	100	87.708	Peromyscus_maniculatus_bairdii
ENSPCAG00000006208	R3HDM1	64	56.747	ENSPMAG00000003369	-	83	57.249	Petromyzon_marinus
ENSPCAG00000006208	R3HDM1	95	83.469	ENSPCIG00000002491	R3HDM1	95	82.385	Phascolarctos_cinereus
ENSPCAG00000006208	R3HDM1	82	59.118	ENSPFOG00000015036	r3hdm1	93	58.112	Poecilia_formosa
ENSPCAG00000006208	R3HDM1	67	69.604	ENSPLAG00000018042	r3hdm1	93	54.142	Poecilia_latipinna
ENSPCAG00000006208	R3HDM1	73	69.604	ENSPMEG00000023947	r3hdm1	93	54.142	Poecilia_mexicana
ENSPCAG00000006208	R3HDM1	67	70.044	ENSPREG00000007902	r3hdm1	81	70.354	Poecilia_reticulata
ENSPCAG00000006208	R3HDM1	100	80.689	ENSPPYG00000012815	R3HDM1	100	81.324	Pongo_abelii
ENSPCAG00000006208	R3HDM1	100	79.038	ENSPCOG00000012698	R3HDM1	100	79.382	Propithecus_coquereli
ENSPCAG00000006208	R3HDM1	92	84.469	ENSPVAG00000006098	R3HDM1	92	84.469	Pteropus_vampyrus
ENSPCAG00000006208	R3HDM1	70	76.170	ENSPNAG00000005436	R3HDM1	87	76.496	Pygocentrus_nattereri
ENSPCAG00000006208	R3HDM1	77	68.601	ENSPNAG00000013952	r3hdm1	84	74.043	Pygocentrus_nattereri
ENSPCAG00000006208	R3HDM1	100	75.330	ENSRNOG00000004099	R3hdm1	100	75.419	Rattus_norvegicus
ENSPCAG00000006208	R3HDM1	100	79.710	ENSRBIG00000033317	R3HDM1	92	97.436	Rhinopithecus_bieti
ENSPCAG00000006208	R3HDM1	100	81.233	ENSRROG00000034534	R3HDM1	100	81.868	Rhinopithecus_roxellana
ENSPCAG00000006208	R3HDM1	100	81.233	ENSSBOG00000020389	R3HDM1	100	81.777	Saimiri_boliviensis_boliviensis
ENSPCAG00000006208	R3HDM1	95	82.834	ENSSHAG00000016999	R3HDM1	95	81.744	Sarcophilus_harrisii
ENSPCAG00000006208	R3HDM1	89	68.263	ENSSFOG00015014134	r3hdm1	84	79.828	Scleropages_formosus
ENSPCAG00000006208	R3HDM1	88	65.089	ENSSFOG00015019851	-	89	65.282	Scleropages_formosus
ENSPCAG00000006208	R3HDM1	75	69.778	ENSSMAG00000001669	r3hdm1	94	42.033	Scophthalmus_maximus
ENSPCAG00000006208	R3HDM1	65	70.000	ENSSDUG00000010749	r3hdm1	80	70.306	Seriola_dumerili
ENSPCAG00000006208	R3HDM1	87	59.050	ENSSLDG00000004499	r3hdm1	86	58.929	Seriola_lalandi_dorsalis
ENSPCAG00000006208	R3HDM1	69	79.070	ENSSARG00000000352	-	69	79.070	Sorex_araneus
ENSPCAG00000006208	R3HDM1	100	69.238	ENSSPUG00000004167	R3HDM1	100	68.966	Sphenodon_punctatus
ENSPCAG00000006208	R3HDM1	75	60.534	ENSSPAG00000004648	r3hdm1	86	59.821	Stegastes_partitus
ENSPCAG00000006208	R3HDM1	93	92.453	ENSSSCG00000015692	R3HDM1	94	92.453	Sus_scrofa
ENSPCAG00000006208	R3HDM1	94	79.697	ENSTGUG00000011750	R3HDM1	94	79.697	Taeniopygia_guttata
ENSPCAG00000006208	R3HDM1	65	68.860	ENSTRUG00000011654	r3hdm1	80	69.163	Takifugu_rubripes
ENSPCAG00000006208	R3HDM1	72	65.328	ENSTNIG00000010362	r3hdm1	82	65.649	Tetraodon_nigroviridis
ENSPCAG00000006208	R3HDM1	100	76.503	ENSTTRG00000003935	R3HDM1	100	76.867	Tursiops_truncatus
ENSPCAG00000006208	R3HDM1	70	78.065	ENSUAMG00000024806	R3HDM1	99	79.705	Ursus_americanus
ENSPCAG00000006208	R3HDM1	100	78.344	ENSUMAG00000005552	R3HDM1	98	83.232	Ursus_maritimus
ENSPCAG00000006208	R3HDM1	93	89.474	ENSVPAG00000007333	R3HDM1	93	89.474	Vicugna_pacos
ENSPCAG00000006208	R3HDM1	100	80.000	ENSVVUG00000006457	R3HDM1	98	82.927	Vulpes_vulpes
ENSPCAG00000006208	R3HDM1	83	64.557	ENSXETG00000019330	r3hdm1	100	56.680	Xenopus_tropicalis
ENSPCAG00000006208	R3HDM1	71	60.237	ENSXMAG00000007885	r3hdm1	77	70.354	Xiphophorus_maculatus