EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000006268 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 33555 bases
Position: chrGeneScaffold_1255:32532-66086
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000005875	SRP54	PF00448.22	9.1e-72	1	1
ENSPCAP00000005875	SRP54_N	PF02881.19	9.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006287	SRP54-201	1515	-	ENSPCAP00000005875	504 (aa)	-	UPI00018B0A6F

Gene Model

Click here to download ENSPCAG00000006268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006268	SRP54	100	95.833	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPCAG00000006268	SRP54	100	92.262	ENSAPOG00000011314	srp54	100	92.262	Acanthochromis_polyacanthus
ENSPCAG00000006268	SRP54	100	95.833	ENSAMEG00000015544	SRP54	100	95.833	Ailuropoda_melanoleuca
ENSPCAG00000006268	SRP54	89	90.646	ENSACIG00000022831	srp54	97	90.646	Amphilophus_citrinellus
ENSPCAG00000006268	SRP54	100	92.262	ENSAOCG00000019401	srp54	100	92.262	Amphiprion_ocellaris
ENSPCAG00000006268	SRP54	100	92.262	ENSAPEG00000001977	srp54	100	92.262	Amphiprion_percula
ENSPCAG00000006268	SRP54	100	92.460	ENSATEG00000013877	srp54	100	92.460	Anabas_testudineus
ENSPCAG00000006268	SRP54	94	94.304	ENSAPLG00000010125	SRP54	95	94.304	Anas_platyrhynchos
ENSPCAG00000006268	SRP54	64	81.957	ENSACAG00000001124	-	99	81.957	Anolis_carolinensis
ENSPCAG00000006268	SRP54	86	91.014	ENSACAG00000010631	-	100	91.014	Anolis_carolinensis
ENSPCAG00000006268	SRP54	100	94.444	ENSACAG00000002103	-	100	94.444	Anolis_carolinensis
ENSPCAG00000006268	SRP54	100	95.833	ENSANAG00000022133	SRP54	100	95.833	Aotus_nancymaae
ENSPCAG00000006268	SRP54	100	92.262	ENSACLG00000015866	srp54	100	92.262	Astatotilapia_calliptera
ENSPCAG00000006268	SRP54	100	91.865	ENSAMXG00000032669	SRP54	100	91.865	Astyanax_mexicanus
ENSPCAG00000006268	SRP54	100	95.833	ENSBTAG00000019085	SRP54	100	95.833	Bos_taurus
ENSPCAG00000006268	SRP54	98	68.675	WBGene00009012	F21D5.7	100	68.675	Caenorhabditis_elegans
ENSPCAG00000006268	SRP54	100	95.833	ENSCJAG00000006581	SRP54	100	95.833	Callithrix_jacchus
ENSPCAG00000006268	SRP54	100	95.833	ENSCAFG00000013331	SRP54	100	95.833	Canis_familiaris
ENSPCAG00000006268	SRP54	100	95.833	ENSCAFG00020023427	SRP54	100	95.833	Canis_lupus_dingo
ENSPCAG00000006268	SRP54	100	95.833	ENSCHIG00000026345	SRP54	100	95.833	Capra_hircus
ENSPCAG00000006268	SRP54	100	95.635	ENSTSYG00000002680	-	100	95.635	Carlito_syrichta
ENSPCAG00000006268	SRP54	94	84.632	ENSTSYG00000035333	-	93	84.632	Carlito_syrichta
ENSPCAG00000006268	SRP54	94	60.408	ENSCAPG00000008780	SRP54	100	60.408	Cavia_aperea
ENSPCAG00000006268	SRP54	100	95.437	ENSCPOG00000003691	SRP54	100	95.437	Cavia_porcellus
ENSPCAG00000006268	SRP54	90	95.227	ENSCCAG00000024179	SRP54	100	95.227	Cebus_capucinus
ENSPCAG00000006268	SRP54	100	95.833	ENSCATG00000034083	SRP54	100	95.833	Cercocebus_atys
ENSPCAG00000006268	SRP54	100	95.833	ENSCLAG00000015076	SRP54	100	95.833	Chinchilla_lanigera
ENSPCAG00000006268	SRP54	100	95.833	ENSCSAG00000015575	SRP54	100	95.833	Chlorocebus_sabaeus
ENSPCAG00000006268	SRP54	95	91.892	ENSCHOG00000008986	SRP54	100	91.892	Choloepus_hoffmanni
ENSPCAG00000006268	SRP54	100	95.040	ENSCPBG00000026195	SRP54	100	95.040	Chrysemys_picta_bellii
ENSPCAG00000006268	SRP54	100	78.373	ENSCING00000007380	-	100	78.373	Ciona_intestinalis
ENSPCAG00000006268	SRP54	100	95.833	ENSCANG00000028532	SRP54	100	95.833	Colobus_angolensis_palliatus
ENSPCAG00000006268	SRP54	100	95.635	ENSCGRG00001009525	-	100	95.635	Cricetulus_griseus_chok1gshd
ENSPCAG00000006268	SRP54	76	94.286	ENSCGRG00000009453	-	89	94.286	Cricetulus_griseus_crigri
ENSPCAG00000006268	SRP54	100	91.468	ENSCSEG00000012392	srp54	100	91.468	Cynoglossus_semilaevis
ENSPCAG00000006268	SRP54	100	92.262	ENSCVAG00000010395	srp54	100	92.262	Cyprinodon_variegatus
ENSPCAG00000006268	SRP54	100	92.262	ENSDARG00000098367	srp54	100	92.262	Danio_rerio
ENSPCAG00000006268	SRP54	100	95.833	ENSDNOG00000032525	SRP54	100	95.833	Dasypus_novemcinctus
ENSPCAG00000006268	SRP54	89	80.580	ENSDORG00000005159	-	97	80.580	Dipodomys_ordii
ENSPCAG00000006268	SRP54	96	74.639	FBgn0010747	Srp54k	98	74.297	Drosophila_melanogaster
ENSPCAG00000006268	SRP54	83	54.785	ENSETEG00000012102	-	99	54.785	Echinops_telfairi
ENSPCAG00000006268	SRP54	100	94.841	ENSETEG00000016307	-	100	94.841	Echinops_telfairi
ENSPCAG00000006268	SRP54	100	84.325	ENSEBUG00000009437	-	100	84.325	Eptatretus_burgeri
ENSPCAG00000006268	SRP54	100	95.833	ENSEASG00005002057	SRP54	100	95.833	Equus_asinus_asinus
ENSPCAG00000006268	SRP54	99	95.582	ENSECAG00000018042	SRP54	98	95.582	Equus_caballus
ENSPCAG00000006268	SRP54	100	79.365	ENSEEUG00000001511	SRP54	100	79.365	Erinaceus_europaeus
ENSPCAG00000006268	SRP54	100	91.667	ENSELUG00000003395	srp54	100	91.667	Esox_lucius
ENSPCAG00000006268	SRP54	100	95.833	ENSFCAG00000032033	SRP54	100	95.833	Felis_catus
ENSPCAG00000006268	SRP54	100	94.643	ENSFALG00000005995	SRP54	100	94.643	Ficedula_albicollis
ENSPCAG00000006268	SRP54	100	95.833	ENSFDAG00000016767	SRP54	100	95.833	Fukomys_damarensis
ENSPCAG00000006268	SRP54	100	91.865	ENSFHEG00000004263	srp54	100	91.865	Fundulus_heteroclitus
ENSPCAG00000006268	SRP54	95	86.402	ENSGMOG00000011391	srp54	100	86.402	Gadus_morhua
ENSPCAG00000006268	SRP54	100	94.643	ENSGALG00000023135	SRP54	100	94.643	Gallus_gallus
ENSPCAG00000006268	SRP54	100	92.460	ENSGAFG00000011586	srp54	100	92.460	Gambusia_affinis
ENSPCAG00000006268	SRP54	100	91.667	ENSGACG00000004181	srp54	100	91.667	Gasterosteus_aculeatus
ENSPCAG00000006268	SRP54	100	95.040	ENSGAGG00000014766	SRP54	100	95.040	Gopherus_agassizii
ENSPCAG00000006268	SRP54	100	95.833	ENSGGOG00000002926	SRP54	100	95.833	Gorilla_gorilla
ENSPCAG00000006268	SRP54	100	92.262	ENSHBUG00000005678	srp54	100	92.262	Haplochromis_burtoni
ENSPCAG00000006268	SRP54	100	95.833	ENSHGLG00000002850	SRP54	100	95.833	Heterocephalus_glaber_female
ENSPCAG00000006268	SRP54	100	66.139	ENSHGLG00100007281	-	100	66.139	Heterocephalus_glaber_male
ENSPCAG00000006268	SRP54	100	95.833	ENSHGLG00100005263	SRP54	100	95.833	Heterocephalus_glaber_male
ENSPCAG00000006268	SRP54	100	90.675	ENSHCOG00000021127	srp54	100	90.675	Hippocampus_comes
ENSPCAG00000006268	SRP54	100	91.468	ENSIPUG00000001420	srp54	100	91.468	Ictalurus_punctatus
ENSPCAG00000006268	SRP54	100	95.833	ENSSTOG00000016023	SRP54	100	95.833	Ictidomys_tridecemlineatus
ENSPCAG00000006268	SRP54	87	72.273	ENSJJAG00000016404	-	100	72.273	Jaculus_jaculus
ENSPCAG00000006268	SRP54	100	90.873	ENSJJAG00000013417	-	100	90.873	Jaculus_jaculus
ENSPCAG00000006268	SRP54	100	91.865	ENSKMAG00000007707	srp54	100	91.865	Kryptolebias_marmoratus
ENSPCAG00000006268	SRP54	100	92.262	ENSLBEG00000021122	srp54	100	92.262	Labrus_bergylta
ENSPCAG00000006268	SRP54	100	92.262	ENSLBEG00000018690	srp54	100	92.262	Labrus_bergylta
ENSPCAG00000006268	SRP54	100	92.262	ENSLACG00000017890	SRP54	100	92.262	Latimeria_chalumnae
ENSPCAG00000006268	SRP54	100	92.659	ENSLOCG00000009440	srp54	100	92.659	Lepisosteus_oculatus
ENSPCAG00000006268	SRP54	100	95.833	ENSLAFG00000012007	SRP54	100	95.833	Loxodonta_africana
ENSPCAG00000006268	SRP54	100	95.833	ENSMFAG00000044371	SRP54	100	95.833	Macaca_fascicularis
ENSPCAG00000006268	SRP54	100	95.833	ENSMMUG00000015073	FAM177A1	100	95.833	Macaca_mulatta
ENSPCAG00000006268	SRP54	100	95.833	ENSMNEG00000006947	SRP54	100	95.833	Macaca_nemestrina
ENSPCAG00000006268	SRP54	100	95.833	ENSMLEG00000042251	SRP54	100	95.833	Mandrillus_leucophaeus
ENSPCAG00000006268	SRP54	100	92.262	ENSMAMG00000004803	srp54	100	92.262	Mastacembelus_armatus
ENSPCAG00000006268	SRP54	100	92.262	ENSMZEG00005027528	srp54	100	92.262	Maylandia_zebra
ENSPCAG00000006268	SRP54	100	90.119	ENSMGAG00000012481	SRP54	100	90.119	Meleagris_gallopavo
ENSPCAG00000006268	SRP54	100	95.635	ENSMAUG00000014447	-	100	95.635	Mesocricetus_auratus
ENSPCAG00000006268	SRP54	100	95.833	ENSMICG00000010270	SRP54	100	95.833	Microcebus_murinus
ENSPCAG00000006268	SRP54	87	95.000	ENSMOCG00000000948	-	100	95.000	Microtus_ochrogaster
ENSPCAG00000006268	SRP54	89	90.157	ENSMMOG00000020303	srp54	98	90.157	Mola_mola
ENSPCAG00000006268	SRP54	100	95.635	ENSMODG00000023150	-	100	95.635	Monodelphis_domestica
ENSPCAG00000006268	SRP54	100	95.635	ENSMODG00000012925	-	100	95.635	Monodelphis_domestica
ENSPCAG00000006268	SRP54	89	90.402	ENSMALG00000009163	srp54	99	90.402	Monopterus_albus
ENSPCAG00000006268	SRP54	100	95.635	MGP_CAROLIEiJ_G0017754	-	100	95.635	Mus_caroli
ENSPCAG00000006268	SRP54	100	95.635	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSPCAG00000006268	SRP54	100	95.635	ENSMUSG00000112449	Srp54b	100	95.635	Mus_musculus
ENSPCAG00000006268	SRP54	100	94.841	ENSMUSG00000079108	Srp54c	100	94.841	Mus_musculus
ENSPCAG00000006268	SRP54	100	95.635	MGP_PahariEiJ_G0029510	-	100	95.635	Mus_pahari
ENSPCAG00000006268	SRP54	100	95.833	ENSMPUG00000016302	SRP54	100	95.833	Mustela_putorius_furo
ENSPCAG00000006268	SRP54	100	95.238	ENSMLUG00000008958	SRP54	100	95.238	Myotis_lucifugus
ENSPCAG00000006268	SRP54	100	89.683	ENSNGAG00000019806	-	100	89.683	Nannospalax_galili
ENSPCAG00000006268	SRP54	87	91.364	ENSNBRG00000006000	srp54	100	91.364	Neolamprologus_brichardi
ENSPCAG00000006268	SRP54	100	95.833	ENSNLEG00000003496	SRP54	100	95.833	Nomascus_leucogenys
ENSPCAG00000006268	SRP54	63	100.000	ENSMEUG00000000138	-	72	100.000	Notamacropus_eugenii
ENSPCAG00000006268	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSPCAG00000006268	SRP54	100	95.833	ENSODEG00000004865	SRP54	100	95.833	Octodon_degus
ENSPCAG00000006268	SRP54	100	92.262	ENSONIG00000011768	srp54	100	92.262	Oreochromis_niloticus
ENSPCAG00000006268	SRP54	100	95.833	ENSOANG00000014051	SRP54	100	95.833	Ornithorhynchus_anatinus
ENSPCAG00000006268	SRP54	100	95.238	ENSOCUG00000007838	SRP54	100	95.238	Oryctolagus_cuniculus
ENSPCAG00000006268	SRP54	100	92.063	ENSORLG00000010027	srp54	100	92.063	Oryzias_latipes
ENSPCAG00000006268	SRP54	100	92.063	ENSORLG00020001878	srp54	100	92.063	Oryzias_latipes_hni
ENSPCAG00000006268	SRP54	100	92.063	ENSORLG00015021866	srp54	100	92.063	Oryzias_latipes_hsok
ENSPCAG00000006268	SRP54	100	92.063	ENSOMEG00000020952	srp54	100	92.063	Oryzias_melastigma
ENSPCAG00000006268	SRP54	100	95.833	ENSOGAG00000012188	SRP54	100	95.833	Otolemur_garnettii
ENSPCAG00000006268	SRP54	100	95.833	ENSOARG00000007160	SRP54	100	95.833	Ovis_aries
ENSPCAG00000006268	SRP54	100	95.833	ENSPPAG00000017434	SRP54	100	95.833	Pan_paniscus
ENSPCAG00000006268	SRP54	100	94.841	ENSPPRG00000014047	SRP54	100	94.841	Panthera_pardus
ENSPCAG00000006268	SRP54	100	95.833	ENSPTIG00000000744	SRP54	96	95.833	Panthera_tigris_altaica
ENSPCAG00000006268	SRP54	100	95.833	ENSPTRG00000006259	FAM177A1	100	95.833	Pan_troglodytes
ENSPCAG00000006268	SRP54	100	95.833	ENSPANG00000023853	SRP54	100	95.833	Papio_anubis
ENSPCAG00000006268	SRP54	100	92.063	ENSPKIG00000001953	srp54	100	92.063	Paramormyrops_kingsleyae
ENSPCAG00000006268	SRP54	100	94.841	ENSPSIG00000006476	SRP54	100	94.841	Pelodiscus_sinensis
ENSPCAG00000006268	SRP54	91	89.130	ENSPMGG00000004127	srp54	99	89.130	Periophthalmus_magnuspinnatus
ENSPCAG00000006268	SRP54	100	82.738	ENSPEMG00000019634	-	100	82.738	Peromyscus_maniculatus_bairdii
ENSPCAG00000006268	SRP54	100	85.714	ENSPMAG00000006078	-	100	85.714	Petromyzon_marinus
ENSPCAG00000006268	SRP54	100	95.635	ENSPCIG00000016175	SRP54	100	95.635	Phascolarctos_cinereus
ENSPCAG00000006268	SRP54	100	92.460	ENSPFOG00000008870	srp54	100	92.460	Poecilia_formosa
ENSPCAG00000006268	SRP54	100	92.460	ENSPLAG00000009889	srp54	100	92.460	Poecilia_latipinna
ENSPCAG00000006268	SRP54	100	92.460	ENSPMEG00000008601	srp54	100	92.460	Poecilia_mexicana
ENSPCAG00000006268	SRP54	100	92.460	ENSPREG00000004505	srp54	100	92.460	Poecilia_reticulata
ENSPCAG00000006268	SRP54	100	90.675	ENSPPYG00000005739	SRP54	100	90.675	Pongo_abelii
ENSPCAG00000006268	SRP54	100	93.861	ENSPCOG00000022473	SRP54	100	93.861	Propithecus_coquereli
ENSPCAG00000006268	SRP54	59	100.000	ENSPVAG00000010056	SRP54	77	100.000	Pteropus_vampyrus
ENSPCAG00000006268	SRP54	100	92.262	ENSPNYG00000009717	srp54	100	92.262	Pundamilia_nyererei
ENSPCAG00000006268	SRP54	100	91.865	ENSPNAG00000008544	srp54	100	91.865	Pygocentrus_nattereri
ENSPCAG00000006268	SRP54	100	95.437	ENSRNOG00000032776	Srp54a	100	95.437	Rattus_norvegicus
ENSPCAG00000006268	SRP54	100	95.833	ENSRROG00000041292	SRP54	100	95.833	Rhinopithecus_roxellana
ENSPCAG00000006268	SRP54	86	50.113	YPR088C	SRP54	95	45.785	Saccharomyces_cerevisiae
ENSPCAG00000006268	SRP54	94	95.570	ENSSBOG00000035145	SRP54	100	95.570	Saimiri_boliviensis_boliviensis
ENSPCAG00000006268	SRP54	64	100.000	ENSSHAG00000000671	SRP54	94	100.000	Sarcophilus_harrisii
ENSPCAG00000006268	SRP54	100	92.659	ENSSFOG00015013920	srp54	100	92.659	Scleropages_formosus
ENSPCAG00000006268	SRP54	100	86.517	ENSSMAG00000002441	srp54	100	86.517	Scophthalmus_maximus
ENSPCAG00000006268	SRP54	100	92.063	ENSSDUG00000018586	srp54	100	92.063	Seriola_dumerili
ENSPCAG00000006268	SRP54	100	92.063	ENSSLDG00000010476	srp54	100	92.063	Seriola_lalandi_dorsalis
ENSPCAG00000006268	SRP54	100	95.833	ENSSARG00000002744	SRP54	100	95.833	Sorex_araneus
ENSPCAG00000006268	SRP54	100	95.040	ENSSPUG00000013101	SRP54	100	95.040	Sphenodon_punctatus
ENSPCAG00000006268	SRP54	100	92.262	ENSSPAG00000002354	srp54	100	92.262	Stegastes_partitus
ENSPCAG00000006268	SRP54	100	95.833	ENSSSCG00000001955	SRP54	100	95.833	Sus_scrofa
ENSPCAG00000006268	SRP54	94	94.304	ENSTGUG00000011945	-	95	94.304	Taeniopygia_guttata
ENSPCAG00000006268	SRP54	100	91.667	ENSTRUG00000007057	srp54	100	91.667	Takifugu_rubripes
ENSPCAG00000006268	SRP54	100	91.270	ENSTNIG00000002589	srp54	100	91.270	Tetraodon_nigroviridis
ENSPCAG00000006268	SRP54	89	86.801	ENSTBEG00000011409	SRP54	100	86.801	Tupaia_belangeri
ENSPCAG00000006268	SRP54	100	93.651	ENSTTRG00000000928	SRP54	100	93.651	Tursiops_truncatus
ENSPCAG00000006268	SRP54	52	91.985	ENSUAMG00000012385	SRP54	100	91.985	Ursus_americanus
ENSPCAG00000006268	SRP54	100	95.833	ENSUMAG00000011234	SRP54	100	95.833	Ursus_maritimus
ENSPCAG00000006268	SRP54	94	95.359	ENSVPAG00000005668	SRP54	100	95.359	Vicugna_pacos
ENSPCAG00000006268	SRP54	100	95.833	ENSVVUG00000019962	SRP54	100	95.833	Vulpes_vulpes
ENSPCAG00000006268	SRP54	100	78.501	ENSXETG00000012290	srp54	100	78.516	Xenopus_tropicalis
ENSPCAG00000006268	SRP54	88	91.874	ENSXCOG00000004658	srp54	96	91.874	Xiphophorus_couchianus
ENSPCAG00000006268	SRP54	100	92.460	ENSXMAG00000018315	srp54	100	92.460	Xiphophorus_maculatus