EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000006463 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 44390 bases
Position: chrGeneScaffold_4266:4182-48571
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006052	DND1_DSRM	PF14709.7	7.4e-16	1	1
ENSPCAP00000006052	RRM_1	PF00076.22	7.8e-17	1	2
ENSPCAP00000006052	RRM_1	PF00076.22	7.8e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006473	A1CF-201	1767	-	ENSPCAP00000006052	588 (aa)	-	UPI00018AF138

Gene Model

Click here to download ENSPCAG00000006463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000006463	A1CF	61	35.655	ENSPCAG00000003110	RBM46	57	37.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006463	A1CF	79	74.784	ENSG00000148584	A1CF	79	74.784	Homo_sapiens
ENSPCAG00000006463	A1CF	62	65.312	ENSAPOG00000008259	a1cf	80	54.582	Acanthochromis_polyacanthus
ENSPCAG00000006463	A1CF	79	73.093	ENSAMEG00000000523	A1CF	79	73.093	Ailuropoda_melanoleuca
ENSPCAG00000006463	A1CF	79	60.788	ENSACIG00000008632	a1cf	80	61.203	Amphilophus_citrinellus
ENSPCAG00000006463	A1CF	62	67.109	ENSAOCG00000023744	a1cf	79	58.958	Amphiprion_ocellaris
ENSPCAG00000006463	A1CF	62	65.714	ENSAPEG00000009537	a1cf	79	57.992	Amphiprion_percula
ENSPCAG00000006463	A1CF	79	60.707	ENSATEG00000013720	a1cf	80	61.123	Anabas_testudineus
ENSPCAG00000006463	A1CF	68	78.495	ENSAPLG00000002964	A1CF	71	78.495	Anas_platyrhynchos
ENSPCAG00000006463	A1CF	62	75.549	ENSACAG00000015269	A1CF	79	66.667	Anolis_carolinensis
ENSPCAG00000006463	A1CF	79	74.784	ENSANAG00000019974	A1CF	79	74.784	Aotus_nancymaae
ENSPCAG00000006463	A1CF	68	72.222	ENSACLG00000017428	a1cf	79	60.417	Astatotilapia_calliptera
ENSPCAG00000006463	A1CF	70	71.429	ENSAMXG00000018180	a1cf	83	62.319	Astyanax_mexicanus
ENSPCAG00000006463	A1CF	70	89.796	ENSBTAG00000021195	A1CF	79	74.839	Bos_taurus
ENSPCAG00000006463	A1CF	79	73.941	ENSCJAG00000005045	A1CF	79	73.941	Callithrix_jacchus
ENSPCAG00000006463	A1CF	79	72.669	ENSCAFG00000015581	A1CF	79	72.669	Canis_familiaris
ENSPCAG00000006463	A1CF	79	72.669	ENSCAFG00020026421	A1CF	86	77.220	Canis_lupus_dingo
ENSPCAG00000006463	A1CF	70	89.796	ENSCHIG00000020411	A1CF	79	72.939	Capra_hircus
ENSPCAG00000006463	A1CF	70	89.796	ENSTSYG00000001755	A1CF	84	74.569	Carlito_syrichta
ENSPCAG00000006463	A1CF	52	92.982	ENSCAPG00000017386	A1CF	67	92.982	Cavia_aperea
ENSPCAG00000006463	A1CF	79	74.153	ENSCPOG00000009807	A1CF	79	74.153	Cavia_porcellus
ENSPCAG00000006463	A1CF	70	91.837	ENSCCAG00000018168	A1CF	79	73.941	Cebus_capucinus
ENSPCAG00000006463	A1CF	70	91.837	ENSCATG00000043715	A1CF	79	75.000	Cercocebus_atys
ENSPCAG00000006463	A1CF	70	91.837	ENSCLAG00000010424	A1CF	80	73.207	Chinchilla_lanigera
ENSPCAG00000006463	A1CF	70	87.755	ENSCSAG00000007032	A1CF	79	73.729	Chlorocebus_sabaeus
ENSPCAG00000006463	A1CF	79	74.090	ENSCHOG00000009089	A1CF	79	74.304	Choloepus_hoffmanni
ENSPCAG00000006463	A1CF	79	67.230	ENSCPBG00000026464	A1CF	79	67.230	Chrysemys_picta_bellii
ENSPCAG00000006463	A1CF	70	89.796	ENSCANG00000038032	A1CF	79	73.941	Colobus_angolensis_palliatus
ENSPCAG00000006463	A1CF	70	87.755	ENSCGRG00001017413	A1cf	79	71.036	Cricetulus_griseus_chok1gshd
ENSPCAG00000006463	A1CF	70	87.234	ENSCGRG00000017332	A1cf	79	71.036	Cricetulus_griseus_crigri
ENSPCAG00000006463	A1CF	79	58.958	ENSCSEG00000002361	a1cf	80	58.384	Cynoglossus_semilaevis
ENSPCAG00000006463	A1CF	79	59.044	ENSCVAG00000010520	a1cf	80	60.499	Cyprinodon_variegatus
ENSPCAG00000006463	A1CF	79	63.191	ENSDARG00000002968	a1cf	79	63.404	Danio_rerio
ENSPCAG00000006463	A1CF	70	85.714	ENSDNOG00000002829	A1CF	79	72.516	Dasypus_novemcinctus
ENSPCAG00000006463	A1CF	63	71.257	ENSETEG00000012527	A1CF	63	71.257	Echinops_telfairi
ENSPCAG00000006463	A1CF	70	89.796	ENSEASG00005012924	A1CF	82	73.684	Equus_asinus_asinus
ENSPCAG00000006463	A1CF	79	72.842	ENSECAG00000010424	A1CF	80	73.053	Equus_caballus
ENSPCAG00000006463	A1CF	79	62.762	ENSELUG00000003159	a1cf	79	62.762	Esox_lucius
ENSPCAG00000006463	A1CF	70	89.362	ENSFCAG00000011179	A1CF	79	73.491	Felis_catus
ENSPCAG00000006463	A1CF	68	83.333	ENSFALG00000013183	A1CF	71	77.198	Ficedula_albicollis
ENSPCAG00000006463	A1CF	70	89.796	ENSFDAG00000019371	A1CF	79	74.839	Fukomys_damarensis
ENSPCAG00000006463	A1CF	79	59.252	ENSFHEG00000019652	a1cf	82	60.707	Fundulus_heteroclitus
ENSPCAG00000006463	A1CF	79	55.487	ENSGMOG00000018943	a1cf	81	55.487	Gadus_morhua
ENSPCAG00000006463	A1CF	68	80.556	ENSGALG00000003765	A1CF	73	77.688	Gallus_gallus
ENSPCAG00000006463	A1CF	64	68.000	ENSGAFG00000014868	a1cf	69	68.000	Gambusia_affinis
ENSPCAG00000006463	A1CF	79	59.381	ENSGACG00000010241	a1cf	81	60.000	Gasterosteus_aculeatus
ENSPCAG00000006463	A1CF	79	67.019	ENSGAGG00000016508	A1CF	81	67.019	Gopherus_agassizii
ENSPCAG00000006463	A1CF	79	73.729	ENSGGOG00000009670	A1CF	79	73.729	Gorilla_gorilla
ENSPCAG00000006463	A1CF	79	59.917	ENSHBUG00000021959	a1cf	80	60.373	Haplochromis_burtoni
ENSPCAG00000006463	A1CF	70	91.837	ENSHGLG00000008955	A1CF	79	73.362	Heterocephalus_glaber_female
ENSPCAG00000006463	A1CF	70	91.837	ENSHGLG00100000518	A1CF	79	72.516	Heterocephalus_glaber_male
ENSPCAG00000006463	A1CF	62	61.183	ENSHCOG00000017669	a1cf	80	55.193	Hippocampus_comes
ENSPCAG00000006463	A1CF	62	71.088	ENSIPUG00000010367	a1cf	67	71.088	Ictalurus_punctatus
ENSPCAG00000006463	A1CF	68	70.270	ENSKMAG00000006568	a1cf	80	59.350	Kryptolebias_marmoratus
ENSPCAG00000006463	A1CF	78	58.896	ENSLBEG00000020994	a1cf	78	59.381	Labrus_bergylta
ENSPCAG00000006463	A1CF	79	64.957	ENSLACG00000008061	A1CF	79	64.957	Latimeria_chalumnae
ENSPCAG00000006463	A1CF	68	80.556	ENSLOCG00000006302	a1cf	79	64.990	Lepisosteus_oculatus
ENSPCAG00000006463	A1CF	70	87.755	ENSLAFG00000015462	A1CF	79	74.419	Loxodonta_africana
ENSPCAG00000006463	A1CF	70	91.837	ENSMFAG00000035948	A1CF	79	75.431	Macaca_fascicularis
ENSPCAG00000006463	A1CF	70	91.837	ENSMMUG00000007077	A1CF	79	75.431	Macaca_mulatta
ENSPCAG00000006463	A1CF	70	91.837	ENSMNEG00000031454	A1CF	79	75.000	Macaca_nemestrina
ENSPCAG00000006463	A1CF	70	91.837	ENSMLEG00000037223	A1CF	79	73.729	Mandrillus_leucophaeus
ENSPCAG00000006463	A1CF	68	72.973	ENSMAMG00000010402	a1cf	80	59.583	Mastacembelus_armatus
ENSPCAG00000006463	A1CF	79	59.454	ENSMZEG00005013245	a1cf	79	59.454	Maylandia_zebra
ENSPCAG00000006463	A1CF	68	80.556	ENSMGAG00000001507	A1CF	71	77.480	Meleagris_gallopavo
ENSPCAG00000006463	A1CF	79	71.036	ENSMAUG00000007422	A1cf	79	71.036	Mesocricetus_auratus
ENSPCAG00000006463	A1CF	79	73.291	ENSMICG00000003377	A1CF	79	73.504	Microcebus_murinus
ENSPCAG00000006463	A1CF	70	83.673	ENSMOCG00000021536	A1cf	79	70.551	Microtus_ochrogaster
ENSPCAG00000006463	A1CF	79	62.004	ENSMMOG00000009422	a1cf	80	62.004	Mola_mola
ENSPCAG00000006463	A1CF	62	78.630	ENSMODG00000016478	A1CF	68	78.630	Monodelphis_domestica
ENSPCAG00000006463	A1CF	79	57.692	ENSMALG00000012992	a1cf	78	57.692	Monopterus_albus
ENSPCAG00000006463	A1CF	70	83.673	MGP_CAROLIEiJ_G0022873	A1cf	79	72.414	Mus_caroli
ENSPCAG00000006463	A1CF	70	83.673	ENSMUSG00000052595	A1cf	86	76.357	Mus_musculus
ENSPCAG00000006463	A1CF	79	71.983	MGP_PahariEiJ_G0014366	A1cf	79	70.763	Mus_pahari
ENSPCAG00000006463	A1CF	70	81.633	MGP_SPRETEiJ_G0023792	A1cf	79	71.983	Mus_spretus
ENSPCAG00000006463	A1CF	70	91.837	ENSMPUG00000016971	A1CF	79	73.093	Mustela_putorius_furo
ENSPCAG00000006463	A1CF	70	91.489	ENSMLUG00000016071	A1CF	79	72.093	Myotis_lucifugus
ENSPCAG00000006463	A1CF	70	91.837	ENSNGAG00000015136	A1cf	79	73.150	Nannospalax_galili
ENSPCAG00000006463	A1CF	79	59.544	ENSNBRG00000001712	a1cf	80	60.788	Neolamprologus_brichardi
ENSPCAG00000006463	A1CF	70	91.837	ENSNLEG00000012028	A1CF	71	91.837	Nomascus_leucogenys
ENSPCAG00000006463	A1CF	70	80.274	ENSMEUG00000015909	A1CF	84	71.183	Notamacropus_eugenii
ENSPCAG00000006463	A1CF	61	88.618	ENSOPRG00000010667	A1CF	68	88.618	Ochotona_princeps
ENSPCAG00000006463	A1CF	79	59.711	ENSONIG00000019105	a1cf	80	60.373	Oreochromis_niloticus
ENSPCAG00000006463	A1CF	58	74.269	ENSOANG00000007360	A1CF	74	74.269	Ornithorhynchus_anatinus
ENSPCAG00000006463	A1CF	70	85.714	ENSOCUG00000011587	A1CF	79	73.176	Oryctolagus_cuniculus
ENSPCAG00000006463	A1CF	79	58.197	ENSORLG00000013342	a1cf	79	58.197	Oryzias_latipes
ENSPCAG00000006463	A1CF	68	67.568	ENSORLG00020000586	a1cf	80	58.487	Oryzias_latipes_hni
ENSPCAG00000006463	A1CF	68	67.568	ENSORLG00015018569	a1cf	80	58.282	Oryzias_latipes_hsok
ENSPCAG00000006463	A1CF	79	59.167	ENSOMEG00000013531	a1cf	80	59.167	Oryzias_melastigma
ENSPCAG00000006463	A1CF	70	79.839	ENSOGAG00000012884	A1CF	79	71.186	Otolemur_garnettii
ENSPCAG00000006463	A1CF	70	89.796	ENSOARG00000013695	A1CF	79	72.939	Ovis_aries
ENSPCAG00000006463	A1CF	79	73.729	ENSPPAG00000028115	A1CF	75	81.452	Pan_paniscus
ENSPCAG00000006463	A1CF	70	89.362	ENSPPRG00000012180	A1CF	79	72.669	Panthera_pardus
ENSPCAG00000006463	A1CF	70	89.362	ENSPTIG00000021223	A1CF	79	72.669	Panthera_tigris_altaica
ENSPCAG00000006463	A1CF	79	74.784	ENSPTRG00000002508	A1CF	82	73.517	Pan_troglodytes
ENSPCAG00000006463	A1CF	70	91.837	ENSPANG00000021988	A1CF	79	75.431	Papio_anubis
ENSPCAG00000006463	A1CF	79	63.598	ENSPKIG00000025176	a1cf	80	63.598	Paramormyrops_kingsleyae
ENSPCAG00000006463	A1CF	79	68.172	ENSPSIG00000010318	A1CF	79	68.172	Pelodiscus_sinensis
ENSPCAG00000006463	A1CF	62	60.606	ENSPMGG00000013359	a1cf	62	61.983	Periophthalmus_magnuspinnatus
ENSPCAG00000006463	A1CF	79	72.727	ENSPEMG00000015021	A1cf	79	72.727	Peromyscus_maniculatus_bairdii
ENSPCAG00000006463	A1CF	68	88.889	ENSPCIG00000002175	A1CF	79	70.753	Phascolarctos_cinereus
ENSPCAG00000006463	A1CF	79	59.470	ENSPFOG00000006683	a1cf	80	60.081	Poecilia_formosa
ENSPCAG00000006463	A1CF	79	59.267	ENSPFOG00000007437	-	80	59.878	Poecilia_formosa
ENSPCAG00000006463	A1CF	79	60.248	ENSPLAG00000000026	a1cf	80	60.870	Poecilia_latipinna
ENSPCAG00000006463	A1CF	79	60.248	ENSPLAG00000001210	-	80	60.870	Poecilia_latipinna
ENSPCAG00000006463	A1CF	70	93.333	ENSPMEG00000000921	a1cf	78	93.333	Poecilia_mexicana
ENSPCAG00000006463	A1CF	70	93.333	ENSPMEG00000015529	-	78	93.333	Poecilia_mexicana
ENSPCAG00000006463	A1CF	79	58.656	ENSPREG00000016298	a1cf	80	60.081	Poecilia_reticulata
ENSPCAG00000006463	A1CF	70	91.837	ENSPPYG00000002819	A1CF	79	75.269	Pongo_abelii
ENSPCAG00000006463	A1CF	70	87.755	ENSPCOG00000024172	A1CF	80	72.574	Propithecus_coquereli
ENSPCAG00000006463	A1CF	79	59.146	ENSPNYG00000017944	a1cf	80	59.592	Pundamilia_nyererei
ENSPCAG00000006463	A1CF	79	64.135	ENSPNAG00000007704	a1cf	80	64.135	Pygocentrus_nattereri
ENSPCAG00000006463	A1CF	70	87.755	ENSRNOG00000033195	A1cf	79	72.258	Rattus_norvegicus
ENSPCAG00000006463	A1CF	70	91.837	ENSRBIG00000042892	A1CF	92	74.138	Rhinopithecus_bieti
ENSPCAG00000006463	A1CF	70	91.837	ENSRROG00000041398	A1CF	83	75.431	Rhinopithecus_roxellana
ENSPCAG00000006463	A1CF	70	87.755	ENSSBOG00000021930	A1CF	92	74.839	Saimiri_boliviensis_boliviensis
ENSPCAG00000006463	A1CF	62	78.082	ENSSHAG00000005096	A1CF	79	69.032	Sarcophilus_harrisii
ENSPCAG00000006463	A1CF	79	64.482	ENSSFOG00015011774	a1cf	77	93.976	Scleropages_formosus
ENSPCAG00000006463	A1CF	79	58.045	ENSSMAG00000013271	a1cf	80	58.656	Scophthalmus_maximus
ENSPCAG00000006463	A1CF	79	59.833	ENSSDUG00000013930	a1cf	79	59.833	Seriola_dumerili
ENSPCAG00000006463	A1CF	79	53.700	ENSSLDG00000004290	a1cf	79	53.700	Seriola_lalandi_dorsalis
ENSPCAG00000006463	A1CF	70	92.308	ENSSARG00000005940	A1CF	80	81.290	Sorex_araneus
ENSPCAG00000006463	A1CF	70	77.419	ENSSPUG00000006797	A1CF	79	68.143	Sphenodon_punctatus
ENSPCAG00000006463	A1CF	70	85.714	ENSSSCG00000010431	A1CF	79	73.150	Sus_scrofa
ENSPCAG00000006463	A1CF	68	86.111	ENSTGUG00000005090	A1CF	70	76.344	Taeniopygia_guttata
ENSPCAG00000006463	A1CF	79	58.163	ENSTRUG00000001982	a1cf	80	58.163	Takifugu_rubripes
ENSPCAG00000006463	A1CF	79	58.130	ENSTNIG00000003580	a1cf	80	58.130	Tetraodon_nigroviridis
ENSPCAG00000006463	A1CF	70	83.673	ENSTTRG00000013190	A1CF	78	73.763	Tursiops_truncatus
ENSPCAG00000006463	A1CF	70	91.837	ENSUAMG00000020065	A1CF	79	74.138	Ursus_americanus
ENSPCAG00000006463	A1CF	70	91.837	ENSUMAG00000011162	A1CF	82	72.881	Ursus_maritimus
ENSPCAG00000006463	A1CF	70	83.791	ENSVPAG00000006130	A1CF	69	83.791	Vicugna_pacos
ENSPCAG00000006463	A1CF	70	89.796	ENSVVUG00000002504	A1CF	79	73.922	Vulpes_vulpes
ENSPCAG00000006463	A1CF	79	59.119	ENSXETG00000006611	a1cf	79	59.119	Xenopus_tropicalis
ENSPCAG00000006463	A1CF	79	62.213	ENSXCOG00000003302	a1cf	80	62.213	Xiphophorus_couchianus
ENSPCAG00000006463	A1CF	79	61.191	ENSXMAG00000016703	a1cf	80	61.191	Xiphophorus_maculatus