EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000006475 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 33176 bases
Position: chrGeneScaffold_2931:41034-74209
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006081	RRM_1	PF00076.22	4e-05	1	1
ENSPCAP00000006081	SAP	PF02037.27	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006504	SAFB-201	2757	-	ENSPCAP00000006081	918 (aa)	-	UPI00018B070A

Gene Model

Click here to download ENSPCAG00000006475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000006475	SAFB	100	65.393	ENSPCAG00000006352	SAFB2	97	66.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006475	SAFB	100	86.645	ENSG00000160633	SAFB	100	86.645	Homo_sapiens
ENSPCAG00000006475	SAFB	88	43.463	ENSAPOG00000022508	safb	64	39.967	Acanthochromis_polyacanthus
ENSPCAG00000006475	SAFB	100	85.730	ENSAMEG00000012254	SAFB	100	84.324	Ailuropoda_melanoleuca
ENSPCAG00000006475	SAFB	94	37.045	ENSACIG00000006247	safb	91	40.508	Amphilophus_citrinellus
ENSPCAG00000006475	SAFB	92	41.779	ENSAOCG00000006308	safb	92	39.010	Amphiprion_ocellaris
ENSPCAG00000006475	SAFB	88	42.706	ENSAPEG00000023342	safb	64	39.245	Amphiprion_percula
ENSPCAG00000006475	SAFB	95	40.611	ENSATEG00000004998	safb	64	39.801	Anabas_testudineus
ENSPCAG00000006475	SAFB	93	61.054	ENSAPLG00000005780	-	100	60.550	Anas_platyrhynchos
ENSPCAG00000006475	SAFB	89	59.338	ENSAPLG00000006355	-	99	60.402	Anas_platyrhynchos
ENSPCAG00000006475	SAFB	64	52.758	ENSACAG00000016893	-	95	47.897	Anolis_carolinensis
ENSPCAG00000006475	SAFB	100	86.132	ENSANAG00000028821	SAFB	100	85.807	Aotus_nancymaae
ENSPCAG00000006475	SAFB	95	38.864	ENSACLG00000001926	safb	62	37.774	Astatotilapia_calliptera
ENSPCAG00000006475	SAFB	100	82.124	ENSBTAG00000007875	SAFB	100	81.473	Bos_taurus
ENSPCAG00000006475	SAFB	84	94.340	ENSCJAG00000017081	SAFB	100	94.340	Callithrix_jacchus
ENSPCAG00000006475	SAFB	100	87.405	ENSCAFG00000018803	SAFB	87	86.971	Canis_familiaris
ENSPCAG00000006475	SAFB	100	87.405	ENSCAFG00020018943	SAFB	100	86.971	Canis_lupus_dingo
ENSPCAG00000006475	SAFB	100	80.932	ENSCHIG00000007262	SAFB	98	91.038	Capra_hircus
ENSPCAG00000006475	SAFB	58	69.231	ENSTSYG00000001851	-	100	68.421	Carlito_syrichta
ENSPCAG00000006475	SAFB	82	77.661	ENSCAPG00000012121	SAFB	75	77.951	Cavia_aperea
ENSPCAG00000006475	SAFB	100	81.403	ENSCPOG00000026322	SAFB	100	81.403	Cavia_porcellus
ENSPCAG00000006475	SAFB	100	86.566	ENSCCAG00000020193	SAFB	100	86.566	Cebus_capucinus
ENSPCAG00000006475	SAFB	100	86.674	ENSCATG00000029994	SAFB	100	86.349	Cercocebus_atys
ENSPCAG00000006475	SAFB	100	82.158	ENSCLAG00000007734	SAFB	100	83.974	Chinchilla_lanigera
ENSPCAG00000006475	SAFB	100	86.566	ENSCSAG00000009949	SAFB	100	86.241	Chlorocebus_sabaeus
ENSPCAG00000006475	SAFB	86	85.714	ENSCHOG00000003208	SAFB	93	87.179	Choloepus_hoffmanni
ENSPCAG00000006475	SAFB	91	59.953	ENSCPBG00000010928	-	99	59.670	Chrysemys_picta_bellii
ENSPCAG00000006475	SAFB	91	56.869	ENSCPBG00000010936	-	99	58.108	Chrysemys_picta_bellii
ENSPCAG00000006475	SAFB	100	87.562	ENSCANG00000004774	-	99	87.562	Colobus_angolensis_palliatus
ENSPCAG00000006475	SAFB	100	81.216	ENSCANG00000019754	-	100	80.890	Colobus_angolensis_palliatus
ENSPCAG00000006475	SAFB	100	78.549	ENSCGRG00001002254	Safb	100	78.228	Cricetulus_griseus_chok1gshd
ENSPCAG00000006475	SAFB	90	75.029	ENSCGRG00000011529	Safb	96	74.685	Cricetulus_griseus_crigri
ENSPCAG00000006475	SAFB	97	38.095	ENSCSEG00000019870	safb	96	37.972	Cynoglossus_semilaevis
ENSPCAG00000006475	SAFB	94	37.003	ENSCVAG00000002226	safb	64	36.877	Cyprinodon_variegatus
ENSPCAG00000006475	SAFB	89	39.232	ENSDARG00000020467	safb	96	38.445	Danio_rerio
ENSPCAG00000006475	SAFB	100	86.255	ENSDNOG00000015746	SAFB	95	85.477	Dasypus_novemcinctus
ENSPCAG00000006475	SAFB	100	77.742	ENSDORG00000016200	Safb	100	79.127	Dipodomys_ordii
ENSPCAG00000006475	SAFB	70	90.580	ENSETEG00000018679	SAFB	78	90.580	Echinops_telfairi
ENSPCAG00000006475	SAFB	100	81.789	ENSEASG00005023019	SAFB	100	82.651	Equus_asinus_asinus
ENSPCAG00000006475	SAFB	100	84.165	ENSECAG00000018659	SAFB	89	83.948	Equus_caballus
ENSPCAG00000006475	SAFB	91	41.779	ENSELUG00000022327	safb	66	40.954	Esox_lucius
ENSPCAG00000006475	SAFB	100	86.985	ENSFCAG00000011835	SAFB	100	86.551	Felis_catus
ENSPCAG00000006475	SAFB	91	55.982	ENSFALG00000013881	-	99	57.030	Ficedula_albicollis
ENSPCAG00000006475	SAFB	100	61.390	ENSFALG00000013882	-	92	60.814	Ficedula_albicollis
ENSPCAG00000006475	SAFB	92	79.850	ENSFDAG00000020306	SAFB	99	82.306	Fukomys_damarensis
ENSPCAG00000006475	SAFB	61	58.120	ENSFHEG00000004219	safb	64	36.975	Fundulus_heteroclitus
ENSPCAG00000006475	SAFB	53	46.016	ENSGMOG00000014280	safb	63	36.895	Gadus_morhua
ENSPCAG00000006475	SAFB	100	55.979	ENSGALG00000001948	-	100	59.175	Gallus_gallus
ENSPCAG00000006475	SAFB	100	60.986	ENSGALG00000013365	-	100	60.622	Gallus_gallus
ENSPCAG00000006475	SAFB	94	35.076	ENSGAFG00000016162	safb	65	35.127	Gambusia_affinis
ENSPCAG00000006475	SAFB	95	39.592	ENSGACG00000011385	safb	64	37.338	Gasterosteus_aculeatus
ENSPCAG00000006475	SAFB	95	58.539	ENSGAGG00000008424	-	99	59.219	Gopherus_agassizii
ENSPCAG00000006475	SAFB	73	53.687	ENSGAGG00000017702	-	100	53.540	Gopherus_agassizii
ENSPCAG00000006475	SAFB	100	86.241	ENSGGOG00000015109	SAFB	100	85.915	Gorilla_gorilla
ENSPCAG00000006475	SAFB	95	37.066	ENSHBUG00000009218	safb	90	38.998	Haplochromis_burtoni
ENSPCAG00000006475	SAFB	100	84.640	ENSHGLG00000015883	SAFB	100	84.318	Heterocephalus_glaber_female
ENSPCAG00000006475	SAFB	100	69.486	ENSHGLG00100004228	SAFB	74	83.201	Heterocephalus_glaber_male
ENSPCAG00000006475	SAFB	85	35.238	ENSHCOG00000001705	safb	64	33.276	Hippocampus_comes
ENSPCAG00000006475	SAFB	62	61.667	ENSIPUG00000024869	safb2	65	42.197	Ictalurus_punctatus
ENSPCAG00000006475	SAFB	93	83.968	ENSSTOG00000002783	SAFB	100	83.391	Ictidomys_tridecemlineatus
ENSPCAG00000006475	SAFB	100	78.852	ENSJJAG00000009021	Safb	100	79.277	Jaculus_jaculus
ENSPCAG00000006475	SAFB	90	41.841	ENSKMAG00000022308	safb	64	37.664	Kryptolebias_marmoratus
ENSPCAG00000006475	SAFB	95	39.048	ENSLBEG00000006015	safb	63	38.898	Labrus_bergylta
ENSPCAG00000006475	SAFB	64	46.353	ENSLACG00000018090	SAFB	100	48.760	Latimeria_chalumnae
ENSPCAG00000006475	SAFB	95	44.287	ENSLOCG00000003613	safb	94	43.991	Lepisosteus_oculatus
ENSPCAG00000006475	SAFB	99	92.266	ENSLAFG00000003840	SAFB	100	92.266	Loxodonta_africana
ENSPCAG00000006475	SAFB	100	86.782	ENSMFAG00000003885	SAFB	100	86.782	Macaca_fascicularis
ENSPCAG00000006475	SAFB	100	86.674	ENSMMUG00000017970	SAFB	100	86.349	Macaca_mulatta
ENSPCAG00000006475	SAFB	100	83.315	ENSMNEG00000035637	SAFB	100	85.075	Macaca_nemestrina
ENSPCAG00000006475	SAFB	100	81.425	ENSMLEG00000038637	SAFB	88	94.624	Mandrillus_leucophaeus
ENSPCAG00000006475	SAFB	95	39.700	ENSMAMG00000003357	safb	59	38.188	Mastacembelus_armatus
ENSPCAG00000006475	SAFB	95	40.088	ENSMZEG00005009120	safb	65	39.638	Maylandia_zebra
ENSPCAG00000006475	SAFB	97	59.378	ENSMGAG00000001101	-	100	59.111	Meleagris_gallopavo
ENSPCAG00000006475	SAFB	89	55.210	ENSMGAG00000001051	-	100	57.485	Meleagris_gallopavo
ENSPCAG00000006475	SAFB	53	84.600	ENSMAUG00000005013	Safb	100	85.010	Mesocricetus_auratus
ENSPCAG00000006475	SAFB	100	83.189	ENSMICG00000008739	-	100	84.056	Microcebus_murinus
ENSPCAG00000006475	SAFB	85	73.631	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSPCAG00000006475	SAFB	100	78.168	ENSMOCG00000014040	Safb	100	78.275	Microtus_ochrogaster
ENSPCAG00000006475	SAFB	100	70.732	ENSMODG00000001236	SAFB	100	69.989	Monodelphis_domestica
ENSPCAG00000006475	SAFB	92	39.798	ENSMALG00000020330	safb	68	38.259	Monopterus_albus
ENSPCAG00000006475	SAFB	100	78.038	MGP_CAROLIEiJ_G0021780	Safb	100	78.145	Mus_caroli
ENSPCAG00000006475	SAFB	100	78.145	ENSMUSG00000071054	Safb	100	78.252	Mus_musculus
ENSPCAG00000006475	SAFB	100	77.423	MGP_PahariEiJ_G0020769	Safb	95	86.207	Mus_pahari
ENSPCAG00000006475	SAFB	100	86.566	ENSMPUG00000006123	SAFB	94	86.132	Mustela_putorius_furo
ENSPCAG00000006475	SAFB	100	85.915	ENSMLUG00000001081	SAFB	100	85.590	Myotis_lucifugus
ENSPCAG00000006475	SAFB	100	76.539	ENSNGAG00000019882	Safb	100	76.645	Nannospalax_galili
ENSPCAG00000006475	SAFB	99	84.039	ENSNLEG00000013551	SAFB	99	86.812	Nomascus_leucogenys
ENSPCAG00000006475	SAFB	88	79.755	ENSOPRG00000011561	-	99	80.297	Ochotona_princeps
ENSPCAG00000006475	SAFB	100	84.615	ENSODEG00000014838	SAFB	100	84.295	Octodon_degus
ENSPCAG00000006475	SAFB	95	40.153	ENSONIG00000002318	safb	64	39.769	Oreochromis_niloticus
ENSPCAG00000006475	SAFB	90	75.329	ENSOCUG00000014628	SAFB	100	74.224	Oryctolagus_cuniculus
ENSPCAG00000006475	SAFB	88	40.332	ENSORLG00000016989	safb	64	37.583	Oryzias_latipes
ENSPCAG00000006475	SAFB	94	37.500	ENSORLG00020000404	safb	90	38.480	Oryzias_latipes_hni
ENSPCAG00000006475	SAFB	94	40.089	ENSORLG00015010733	safb	64	37.748	Oryzias_latipes_hsok
ENSPCAG00000006475	SAFB	95	37.351	ENSOMEG00000009066	safb	65	37.194	Oryzias_melastigma
ENSPCAG00000006475	SAFB	100	82.251	ENSOGAG00000027769	SAFB	100	82.937	Otolemur_garnettii
ENSPCAG00000006475	SAFB	78	76.356	ENSOARG00000007856	-	100	74.412	Ovis_aries
ENSPCAG00000006475	SAFB	100	78.548	ENSOARG00000007662	-	100	77.898	Ovis_aries
ENSPCAG00000006475	SAFB	100	86.349	ENSPPAG00000035129	SAFB	100	86.349	Pan_paniscus
ENSPCAG00000006475	SAFB	100	86.985	ENSPPRG00000017197	SAFB	100	86.551	Panthera_pardus
ENSPCAG00000006475	SAFB	100	86.349	ENSPTRG00000010335	SAFB	100	86.349	Pan_troglodytes
ENSPCAG00000006475	SAFB	100	86.674	ENSPANG00000007770	SAFB	100	86.674	Papio_anubis
ENSPCAG00000006475	SAFB	93	40.632	ENSPKIG00000009902	safb	93	40.863	Paramormyrops_kingsleyae
ENSPCAG00000006475	SAFB	100	57.922	ENSPSIG00000011679	-	100	60.225	Pelodiscus_sinensis
ENSPCAG00000006475	SAFB	99	59.077	ENSPSIG00000009367	-	99	57.338	Pelodiscus_sinensis
ENSPCAG00000006475	SAFB	100	78.335	ENSPEMG00000020428	Safb	100	78.442	Peromyscus_maniculatus_bairdii
ENSPCAG00000006475	SAFB	58	74.354	ENSPCIG00000009504	-	100	72.878	Phascolarctos_cinereus
ENSPCAG00000006475	SAFB	94	36.333	ENSPFOG00000007745	safb	99	39.952	Poecilia_formosa
ENSPCAG00000006475	SAFB	94	35.674	ENSPLAG00000001614	safb	66	34.531	Poecilia_latipinna
ENSPCAG00000006475	SAFB	65	46.012	ENSPMEG00000021023	safb	67	36.424	Poecilia_mexicana
ENSPCAG00000006475	SAFB	65	41.522	ENSPREG00000012496	safb	65	35.761	Poecilia_reticulata
ENSPCAG00000006475	SAFB	100	86.754	ENSPPYG00000009428	SAFB	100	86.428	Pongo_abelii
ENSPCAG00000006475	SAFB	100	79.351	ENSPCOG00000014090	SAFB	100	81.343	Propithecus_coquereli
ENSPCAG00000006475	SAFB	100	80.130	ENSPVAG00000004913	SAFB	100	80.130	Pteropus_vampyrus
ENSPCAG00000006475	SAFB	100	78.298	ENSRNOG00000050543	Safb	100	78.936	Rattus_norvegicus
ENSPCAG00000006475	SAFB	96	82.270	ENSRBIG00000042509	SAFB	88	95.699	Rhinopithecus_bieti
ENSPCAG00000006475	SAFB	100	86.782	ENSRROG00000029278	SAFB	100	86.782	Rhinopithecus_roxellana
ENSPCAG00000006475	SAFB	100	86.457	ENSSBOG00000026291	SAFB	100	86.132	Saimiri_boliviensis_boliviensis
ENSPCAG00000006475	SAFB	95	40.803	ENSSFOG00015008156	safb	92	41.943	Scleropages_formosus
ENSPCAG00000006475	SAFB	95	38.462	ENSSMAG00000009316	safb	64	39.044	Scophthalmus_maximus
ENSPCAG00000006475	SAFB	95	40.241	ENSSDUG00000009652	safb	95	38.150	Seriola_dumerili
ENSPCAG00000006475	SAFB	95	40.345	ENSSLDG00000001670	safb	64	37.908	Seriola_lalandi_dorsalis
ENSPCAG00000006475	SAFB	93	79.860	ENSSARG00000010475	SAFB	100	79.860	Sorex_araneus
ENSPCAG00000006475	SAFB	77	58.919	ENSSPUG00000009747	-	99	54.523	Sphenodon_punctatus
ENSPCAG00000006475	SAFB	72	67.935	ENSSPUG00000009820	-	97	57.775	Sphenodon_punctatus
ENSPCAG00000006475	SAFB	93	38.989	ENSSPAG00000015682	safb	68	36.782	Stegastes_partitus
ENSPCAG00000006475	SAFB	100	86.373	ENSSSCG00000013522	SAFB	99	86.718	Sus_scrofa
ENSPCAG00000006475	SAFB	96	60.134	ENSTGUG00000000502	-	100	60.468	Taeniopygia_guttata
ENSPCAG00000006475	SAFB	93	57.758	ENSTGUG00000000489	-	100	59.524	Taeniopygia_guttata
ENSPCAG00000006475	SAFB	88	39.269	ENSTRUG00000003567	safb	64	37.931	Takifugu_rubripes
ENSPCAG00000006475	SAFB	88	41.707	ENSTNIG00000015470	safb	100	41.537	Tetraodon_nigroviridis
ENSPCAG00000006475	SAFB	73	84.733	ENSTBEG00000013124	-	65	86.364	Tupaia_belangeri
ENSPCAG00000006475	SAFB	92	96.825	ENSTTRG00000013588	SAFB	92	96.825	Tursiops_truncatus
ENSPCAG00000006475	SAFB	77	84.248	ENSUAMG00000024543	SAFB	90	82.841	Ursus_americanus
ENSPCAG00000006475	SAFB	88	84.065	ENSUMAG00000009734	SAFB	96	84.194	Ursus_maritimus
ENSPCAG00000006475	SAFB	73	89.844	ENSVPAG00000012043	SAFB	79	89.844	Vicugna_pacos
ENSPCAG00000006475	SAFB	100	87.216	ENSVVUG00000013720	SAFB	87	86.782	Vulpes_vulpes
ENSPCAG00000006475	SAFB	66	45.902	ENSXETG00000008755	safb	96	49.355	Xenopus_tropicalis
ENSPCAG00000006475	SAFB	95	36.031	ENSXMAG00000003458	safb	64	36.258	Xiphophorus_maculatus