EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000006536 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 29327 bases
Position: chrGeneScaffold_1273:1398-30724
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006141	PRP1_N	PF06424.12	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006566	PRPF6-201	2472	-	ENSPCAP00000006141	824 (aa)	-	UPI00018ADD1B

Gene Model

Click here to download ENSPCAG00000006536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006536	PRPF6	88	99.673	ENSG00000101161	PRPF6	95	99.673	Homo_sapiens
ENSPCAG00000006536	PRPF6	88	95.261	ENSAPOG00000010395	prpf6	91	95.261	Acanthochromis_polyacanthus
ENSPCAG00000006536	PRPF6	88	99.673	ENSAMEG00000001916	PRPF6	94	99.673	Ailuropoda_melanoleuca
ENSPCAG00000006536	PRPF6	88	94.118	ENSACIG00000019862	prpf6	91	94.771	Amphilophus_citrinellus
ENSPCAG00000006536	PRPF6	88	95.261	ENSAOCG00000012988	prpf6	91	95.261	Amphiprion_ocellaris
ENSPCAG00000006536	PRPF6	86	92.810	ENSAPEG00000008301	prpf6	73	93.464	Amphiprion_percula
ENSPCAG00000006536	PRPF6	88	93.954	ENSATEG00000005581	prpf6	91	94.608	Anabas_testudineus
ENSPCAG00000006536	PRPF6	88	99.510	ENSACAG00000006464	PRPF6	90	99.510	Anolis_carolinensis
ENSPCAG00000006536	PRPF6	88	99.510	ENSANAG00000012661	PRPF6	97	99.510	Aotus_nancymaae
ENSPCAG00000006536	PRPF6	88	94.281	ENSACLG00000025875	prpf6	91	94.935	Astatotilapia_calliptera
ENSPCAG00000006536	PRPF6	88	94.608	ENSAMXG00000001929	prpf6	91	95.261	Astyanax_mexicanus
ENSPCAG00000006536	PRPF6	88	99.673	ENSBTAG00000011656	PRPF6	95	99.673	Bos_taurus
ENSPCAG00000006536	PRPF6	88	99.510	ENSCJAG00000010616	PRPF6	95	99.510	Callithrix_jacchus
ENSPCAG00000006536	PRPF6	88	99.673	ENSCAFG00000013165	PRPF6	95	99.673	Canis_familiaris
ENSPCAG00000006536	PRPF6	88	99.673	ENSCAFG00020002050	PRPF6	95	99.673	Canis_lupus_dingo
ENSPCAG00000006536	PRPF6	88	99.673	ENSCHIG00000018187	PRPF6	95	99.673	Capra_hircus
ENSPCAG00000006536	PRPF6	88	99.673	ENSTSYG00000007814	PRPF6	95	99.673	Carlito_syrichta
ENSPCAG00000006536	PRPF6	88	98.529	ENSCAPG00000015077	PRPF6	97	98.529	Cavia_aperea
ENSPCAG00000006536	PRPF6	88	99.673	ENSCPOG00000007518	PRPF6	95	99.673	Cavia_porcellus
ENSPCAG00000006536	PRPF6	83	99.510	ENSCCAG00000024564	PRPF6	95	99.510	Cebus_capucinus
ENSPCAG00000006536	PRPF6	88	99.673	ENSCATG00000037473	PRPF6	95	99.673	Cercocebus_atys
ENSPCAG00000006536	PRPF6	88	98.230	ENSCLAG00000003854	PRPF6	95	98.230	Chinchilla_lanigera
ENSPCAG00000006536	PRPF6	88	96.460	ENSCSAG00000016742	PRPF6	95	96.460	Chlorocebus_sabaeus
ENSPCAG00000006536	PRPF6	63	79.264	ENSCHOG00000003315	-	95	79.264	Choloepus_hoffmanni
ENSPCAG00000006536	PRPF6	88	99.510	ENSCPBG00000013964	PRPF6	91	99.510	Chrysemys_picta_bellii
ENSPCAG00000006536	PRPF6	88	75.283	ENSCING00000008817	-	94	75.283	Ciona_intestinalis
ENSPCAG00000006536	PRPF6	88	99.673	ENSCANG00000038230	PRPF6	95	99.673	Colobus_angolensis_palliatus
ENSPCAG00000006536	PRPF6	88	99.673	ENSCGRG00001022666	Prpf6	95	99.673	Cricetulus_griseus_chok1gshd
ENSPCAG00000006536	PRPF6	88	91.150	ENSCSEG00000018561	prpf6	95	91.150	Cynoglossus_semilaevis
ENSPCAG00000006536	PRPF6	88	94.444	ENSCVAG00000010550	prpf6	93	95.098	Cyprinodon_variegatus
ENSPCAG00000006536	PRPF6	88	94.281	ENSDARG00000091367	prpf6	94	94.935	Danio_rerio
ENSPCAG00000006536	PRPF6	88	99.510	ENSDNOG00000040544	PRPF6	95	99.510	Dasypus_novemcinctus
ENSPCAG00000006536	PRPF6	81	98.911	ENSDORG00000005406	Prpf6	97	98.911	Dipodomys_ordii
ENSPCAG00000006536	PRPF6	88	73.039	FBgn0036828	CG6841	96	73.693	Drosophila_melanogaster
ENSPCAG00000006536	PRPF6	70	100.000	ENSETEG00000004447	PRPF6	80	100.000	Echinops_telfairi
ENSPCAG00000006536	PRPF6	88	89.593	ENSEBUG00000008835	prpf6	95	89.593	Eptatretus_burgeri
ENSPCAG00000006536	PRPF6	88	99.673	ENSEASG00005023115	PRPF6	95	99.673	Equus_asinus_asinus
ENSPCAG00000006536	PRPF6	88	99.673	ENSECAG00000013983	PRPF6	95	99.673	Equus_caballus
ENSPCAG00000006536	PRPF6	76	96.460	ENSEEUG00000000180	PRPF6	77	96.460	Erinaceus_europaeus
ENSPCAG00000006536	PRPF6	88	92.920	ENSELUG00000001945	prpf6	88	92.920	Esox_lucius
ENSPCAG00000006536	PRPF6	88	99.673	ENSFCAG00000001183	PRPF6	95	99.673	Felis_catus
ENSPCAG00000006536	PRPF6	88	99.346	ENSFALG00000010326	-	92	99.346	Ficedula_albicollis
ENSPCAG00000006536	PRPF6	88	91.013	ENSFALG00000006046	-	91	91.013	Ficedula_albicollis
ENSPCAG00000006536	PRPF6	88	99.673	ENSFDAG00000006451	PRPF6	97	99.653	Fukomys_damarensis
ENSPCAG00000006536	PRPF6	88	95.261	ENSFHEG00000000560	prpf6	91	95.261	Fundulus_heteroclitus
ENSPCAG00000006536	PRPF6	88	90.438	ENSGMOG00000015622	prpf6	94	90.438	Gadus_morhua
ENSPCAG00000006536	PRPF6	88	99.346	ENSGALG00000006001	PRPF6	94	99.346	Gallus_gallus
ENSPCAG00000006536	PRPF6	88	91.150	ENSGAFG00000021109	prpf6	91	91.150	Gambusia_affinis
ENSPCAG00000006536	PRPF6	88	92.647	ENSGACG00000002576	prpf6	94	92.647	Gasterosteus_aculeatus
ENSPCAG00000006536	PRPF6	88	99.510	ENSGAGG00000008653	PRPF6	91	99.510	Gopherus_agassizii
ENSPCAG00000006536	PRPF6	88	99.673	ENSGGOG00000016876	PRPF6	96	99.646	Gorilla_gorilla
ENSPCAG00000006536	PRPF6	88	94.281	ENSHBUG00000004496	prpf6	91	94.935	Haplochromis_burtoni
ENSPCAG00000006536	PRPF6	88	99.673	ENSHGLG00000009222	PRPF6	95	99.673	Heterocephalus_glaber_female
ENSPCAG00000006536	PRPF6	88	99.673	ENSHGLG00100016600	PRPF6	97	99.673	Heterocephalus_glaber_male
ENSPCAG00000006536	PRPF6	88	93.301	ENSHCOG00000011513	prpf6	91	93.954	Hippocampus_comes
ENSPCAG00000006536	PRPF6	88	94.935	ENSIPUG00000004912	prpf6	91	94.935	Ictalurus_punctatus
ENSPCAG00000006536	PRPF6	88	98.230	ENSSTOG00000002922	PRPF6	95	98.230	Ictidomys_tridecemlineatus
ENSPCAG00000006536	PRPF6	88	99.673	ENSJJAG00000000836	Prpf6	95	99.673	Jaculus_jaculus
ENSPCAG00000006536	PRPF6	88	94.444	ENSKMAG00000017800	prpf6	91	95.098	Kryptolebias_marmoratus
ENSPCAG00000006536	PRPF6	88	93.627	ENSLBEG00000012582	prpf6	91	93.627	Labrus_bergylta
ENSPCAG00000006536	PRPF6	88	97.386	ENSLOCG00000004827	prpf6	90	97.386	Lepisosteus_oculatus
ENSPCAG00000006536	PRPF6	88	100.000	ENSLAFG00000005272	PRPF6	95	100.000	Loxodonta_africana
ENSPCAG00000006536	PRPF6	88	99.673	ENSMFAG00000037542	PRPF6	96	99.646	Macaca_fascicularis
ENSPCAG00000006536	PRPF6	88	96.460	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSPCAG00000006536	PRPF6	83	97.368	ENSMNEG00000045555	PRPF6	95	97.368	Macaca_nemestrina
ENSPCAG00000006536	PRPF6	88	95.261	ENSMAMG00000010718	prpf6	91	95.261	Mastacembelus_armatus
ENSPCAG00000006536	PRPF6	84	93.761	ENSMZEG00005026539	prpf6	97	94.454	Maylandia_zebra
ENSPCAG00000006536	PRPF6	88	94.281	ENSMZEG00005015261	-	94	94.935	Maylandia_zebra
ENSPCAG00000006536	PRPF6	88	99.346	ENSMGAG00000006634	PRPF6	97	99.346	Meleagris_gallopavo
ENSPCAG00000006536	PRPF6	88	99.673	ENSMAUG00000013969	Prpf6	95	99.673	Mesocricetus_auratus
ENSPCAG00000006536	PRPF6	76	99.613	ENSMICG00000017793	PRPF6	96	99.613	Microcebus_murinus
ENSPCAG00000006536	PRPF6	88	99.673	ENSMOCG00000001701	Prpf6	95	99.673	Microtus_ochrogaster
ENSPCAG00000006536	PRPF6	88	93.954	ENSMMOG00000020419	prpf6	95	94.608	Mola_mola
ENSPCAG00000006536	PRPF6	83	99.673	ENSMODG00000017051	PRPF6	96	99.673	Monodelphis_domestica
ENSPCAG00000006536	PRPF6	88	94.771	ENSMALG00000000089	prpf6	96	94.771	Monopterus_albus
ENSPCAG00000006536	PRPF6	88	98.230	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSPCAG00000006536	PRPF6	88	99.673	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSPCAG00000006536	PRPF6	88	99.673	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSPCAG00000006536	PRPF6	88	99.673	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSPCAG00000006536	PRPF6	84	99.480	ENSMPUG00000008673	PRPF6	99	99.480	Mustela_putorius_furo
ENSPCAG00000006536	PRPF6	88	99.673	ENSNGAG00000003365	Prpf6	95	99.673	Nannospalax_galili
ENSPCAG00000006536	PRPF6	88	94.444	ENSNBRG00000015025	prpf6	91	95.098	Neolamprologus_brichardi
ENSPCAG00000006536	PRPF6	88	99.673	ENSNLEG00000010208	PRPF6	95	99.673	Nomascus_leucogenys
ENSPCAG00000006536	PRPF6	88	97.345	ENSMEUG00000009824	-	84	97.345	Notamacropus_eugenii
ENSPCAG00000006536	PRPF6	88	99.673	ENSODEG00000004841	PRPF6	95	99.673	Octodon_degus
ENSPCAG00000006536	PRPF6	88	94.281	ENSONIG00000017406	prpf6	91	94.935	Oreochromis_niloticus
ENSPCAG00000006536	PRPF6	88	99.837	ENSOANG00000004920	PRPF6	94	99.837	Ornithorhynchus_anatinus
ENSPCAG00000006536	PRPF6	88	99.183	ENSOCUG00000014151	PRPF6	96	99.183	Oryctolagus_cuniculus
ENSPCAG00000006536	PRPF6	88	94.444	ENSORLG00000009592	prpf6	91	94.444	Oryzias_latipes
ENSPCAG00000006536	PRPF6	88	94.608	ENSORLG00020001458	prpf6	91	94.608	Oryzias_latipes_hni
ENSPCAG00000006536	PRPF6	88	94.608	ENSORLG00015018762	prpf6	91	94.608	Oryzias_latipes_hsok
ENSPCAG00000006536	PRPF6	88	94.444	ENSOMEG00000012174	prpf6	91	95.098	Oryzias_melastigma
ENSPCAG00000006536	PRPF6	88	95.575	ENSOGAG00000007573	PRPF6	95	95.575	Otolemur_garnettii
ENSPCAG00000006536	PRPF6	88	99.673	ENSOARG00000008776	PRPF6	95	99.673	Ovis_aries
ENSPCAG00000006536	PRPF6	88	99.673	ENSPPAG00000008686	PRPF6	96	99.646	Pan_paniscus
ENSPCAG00000006536	PRPF6	88	99.673	ENSPPRG00000008497	PRPF6	95	99.673	Panthera_pardus
ENSPCAG00000006536	PRPF6	88	99.673	ENSPTIG00000011184	PRPF6	95	99.673	Panthera_tigris_altaica
ENSPCAG00000006536	PRPF6	88	99.673	ENSPTRG00000013765	PRPF6	96	99.646	Pan_troglodytes
ENSPCAG00000006536	PRPF6	88	99.346	ENSPANG00000024135	PRPF6	95	99.346	Papio_anubis
ENSPCAG00000006536	PRPF6	88	96.405	ENSPKIG00000005627	prpf6	94	96.405	Paramormyrops_kingsleyae
ENSPCAG00000006536	PRPF6	84	99.653	ENSPSIG00000007717	PRPF6	97	99.653	Pelodiscus_sinensis
ENSPCAG00000006536	PRPF6	88	91.517	ENSPMGG00000008925	prpf6	91	91.843	Periophthalmus_magnuspinnatus
ENSPCAG00000006536	PRPF6	88	99.837	ENSPEMG00000016036	Prpf6	95	99.837	Peromyscus_maniculatus_bairdii
ENSPCAG00000006536	PRPF6	88	90.265	ENSPMAG00000006144	prpf6	94	90.265	Petromyzon_marinus
ENSPCAG00000006536	PRPF6	88	99.837	ENSPCIG00000017909	PRPF6	94	99.837	Phascolarctos_cinereus
ENSPCAG00000006536	PRPF6	88	94.608	ENSPFOG00000006431	prpf6	91	95.261	Poecilia_formosa
ENSPCAG00000006536	PRPF6	88	94.444	ENSPLAG00000005974	prpf6	91	95.098	Poecilia_latipinna
ENSPCAG00000006536	PRPF6	88	95.425	ENSPMEG00000009977	prpf6	91	95.425	Poecilia_mexicana
ENSPCAG00000006536	PRPF6	88	95.425	ENSPREG00000017993	prpf6	87	95.425	Poecilia_reticulata
ENSPCAG00000006536	PRPF6	88	98.856	ENSPPYG00000011256	PRPF6	95	98.856	Pongo_abelii
ENSPCAG00000006536	PRPF6	88	99.183	ENSPCOG00000016881	PRPF6	95	99.183	Propithecus_coquereli
ENSPCAG00000006536	PRPF6	88	96.330	ENSPVAG00000014316	PRPF6	88	96.330	Pteropus_vampyrus
ENSPCAG00000006536	PRPF6	88	90.265	ENSPNYG00000001939	prpf6	90	90.265	Pundamilia_nyererei
ENSPCAG00000006536	PRPF6	88	94.608	ENSPNAG00000015606	prpf6	91	95.261	Pygocentrus_nattereri
ENSPCAG00000006536	PRPF6	88	99.673	ENSRNOG00000051498	Prpf6	95	99.673	Rattus_norvegicus
ENSPCAG00000006536	PRPF6	88	99.673	ENSRBIG00000043613	PRPF6	98	97.924	Rhinopithecus_bieti
ENSPCAG00000006536	PRPF6	88	99.673	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSPCAG00000006536	PRPF6	82	95.387	ENSSBOG00000020632	PRPF6	97	95.387	Saimiri_boliviensis_boliviensis
ENSPCAG00000006536	PRPF6	88	99.837	ENSSHAG00000016810	PRPF6	94	99.837	Sarcophilus_harrisii
ENSPCAG00000006536	PRPF6	88	96.895	ENSSFOG00015020859	prpf6	96	96.895	Scleropages_formosus
ENSPCAG00000006536	PRPF6	88	93.627	ENSSMAG00000008112	prpf6	91	93.627	Scophthalmus_maximus
ENSPCAG00000006536	PRPF6	88	94.281	ENSSDUG00000016142	prpf6	91	94.935	Seriola_dumerili
ENSPCAG00000006536	PRPF6	88	94.281	ENSSLDG00000025283	prpf6	95	94.935	Seriola_lalandi_dorsalis
ENSPCAG00000006536	PRPF6	84	98.787	ENSSPUG00000018260	PRPF6	97	98.787	Sphenodon_punctatus
ENSPCAG00000006536	PRPF6	88	94.444	ENSSPAG00000015850	prpf6	91	95.098	Stegastes_partitus
ENSPCAG00000006536	PRPF6	88	99.673	ENSSSCG00000029119	PRPF6	97	99.653	Sus_scrofa
ENSPCAG00000006536	PRPF6	88	99.346	ENSTGUG00000007221	PRPF6	94	99.346	Taeniopygia_guttata
ENSPCAG00000006536	PRPF6	88	93.627	ENSTRUG00000002920	prpf6	91	94.281	Takifugu_rubripes
ENSPCAG00000006536	PRPF6	88	88.496	ENSTNIG00000017873	prpf6	95	88.496	Tetraodon_nigroviridis
ENSPCAG00000006536	PRPF6	78	98.895	ENSTBEG00000005348	PRPF6	71	98.895	Tupaia_belangeri
ENSPCAG00000006536	PRPF6	88	99.673	ENSTTRG00000013068	PRPF6	95	99.673	Tursiops_truncatus
ENSPCAG00000006536	PRPF6	88	99.673	ENSUMAG00000021631	PRPF6	94	99.653	Ursus_maritimus
ENSPCAG00000006536	PRPF6	88	99.673	ENSVVUG00000014948	PRPF6	95	99.673	Vulpes_vulpes
ENSPCAG00000006536	PRPF6	88	97.712	ENSXETG00000012054	prpf6	92	97.712	Xenopus_tropicalis
ENSPCAG00000006536	PRPF6	88	95.425	ENSXCOG00000008082	prpf6	91	95.425	Xiphophorus_couchianus
ENSPCAG00000006536	PRPF6	88	95.425	ENSXMAG00000015581	prpf6	91	95.425	Xiphophorus_maculatus