EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000006616 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 9082 bases
Position: chrGeneScaffold_196:77841-86922
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000006157	Met_10	PF02475.16	1.9e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000006584	-	1446	-	ENSPCAP00000006157	482 (aa)	-	UPI00018B05BA

Gene Model

Click here to download ENSPCAG00000006616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000006616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000006616	-	54	89.535	ENSG00000126814	TRMT5	50	89.535	Homo_sapiens
ENSPCAG00000006616	-	53	60.236	ENSAPOG00000015490	trmt5	58	60.236	Acanthochromis_polyacanthus
ENSPCAG00000006616	-	54	90.347	ENSAMEG00000002979	TRMT5	51	90.347	Ailuropoda_melanoleuca
ENSPCAG00000006616	-	53	60.547	ENSACIG00000024216	trmt5	59	60.547	Amphilophus_citrinellus
ENSPCAG00000006616	-	52	61.508	ENSAOCG00000007757	trmt5	57	61.508	Amphiprion_ocellaris
ENSPCAG00000006616	-	52	61.508	ENSAPEG00000022718	trmt5	57	61.508	Amphiprion_percula
ENSPCAG00000006616	-	52	60.474	ENSATEG00000015576	trmt5	51	60.474	Anabas_testudineus
ENSPCAG00000006616	-	52	70.356	ENSAPLG00000008002	TRMT5	51	70.356	Anas_platyrhynchos
ENSPCAG00000006616	-	52	70.472	ENSACAG00000006533	TRMT5	50	70.472	Anolis_carolinensis
ENSPCAG00000006616	-	53	57.647	ENSACLG00000020216	trmt5	52	57.647	Astatotilapia_calliptera
ENSPCAG00000006616	-	53	61.004	ENSAMXG00000021299	trmt5	52	61.004	Astyanax_mexicanus
ENSPCAG00000006616	-	54	89.922	ENSBTAG00000011796	TRMT5	52	89.922	Bos_taurus
ENSPCAG00000006616	-	52	35.507	WBGene00194707	C53A5.17	58	35.507	Caenorhabditis_elegans
ENSPCAG00000006616	-	54	88.760	ENSCJAG00000019157	TRMT5	50	88.760	Callithrix_jacchus
ENSPCAG00000006616	-	54	88.803	ENSCAFG00000015647	TRMT5	52	88.803	Canis_familiaris
ENSPCAG00000006616	-	54	88.803	ENSCAFG00020008016	TRMT5	52	88.803	Canis_lupus_dingo
ENSPCAG00000006616	-	54	91.085	ENSCHIG00000018801	TRMT5	52	91.085	Capra_hircus
ENSPCAG00000006616	-	54	88.417	ENSTSYG00000001043	TRMT5	51	88.417	Carlito_syrichta
ENSPCAG00000006616	-	50	73.485	ENSCAPG00000014642	TRMT5	58	73.485	Cavia_aperea
ENSPCAG00000006616	-	54	84.942	ENSCPOG00000014396	TRMT5	51	84.942	Cavia_porcellus
ENSPCAG00000006616	-	54	87.984	ENSCCAG00000037835	TRMT5	50	87.984	Cebus_capucinus
ENSPCAG00000006616	-	54	88.372	ENSCATG00000045352	TRMT5	50	88.372	Cercocebus_atys
ENSPCAG00000006616	-	54	86.100	ENSCLAG00000013155	TRMT5	54	86.100	Chinchilla_lanigera
ENSPCAG00000006616	-	54	88.417	ENSCHOG00000008128	-	65	88.417	Choloepus_hoffmanni
ENSPCAG00000006616	-	53	74.510	ENSCPBG00000022359	TRMT5	50	74.510	Chrysemys_picta_bellii
ENSPCAG00000006616	-	54	48.289	ENSCING00000018970	-	59	48.289	Ciona_intestinalis
ENSPCAG00000006616	-	52	46.212	ENSCSAVG00000000418	-	56	46.212	Ciona_savignyi
ENSPCAG00000006616	-	54	88.760	ENSCANG00000032648	TRMT5	51	88.760	Colobus_angolensis_palliatus
ENSPCAG00000006616	-	53	84.646	ENSCGRG00001018337	TRMT5	56	84.646	Cricetulus_griseus_chok1gshd
ENSPCAG00000006616	-	52	84.980	ENSCGRG00000010454	Trmt5	50	84.980	Cricetulus_griseus_crigri
ENSPCAG00000006616	-	53	62.205	ENSCSEG00000001533	trmt5	53	62.205	Cynoglossus_semilaevis
ENSPCAG00000006616	-	53	60.236	ENSCVAG00000007630	trmt5	57	60.236	Cyprinodon_variegatus
ENSPCAG00000006616	-	53	62.257	ENSDARG00000069278	trmt5	53	62.257	Danio_rerio
ENSPCAG00000006616	-	53	87.008	ENSDNOG00000019211	TRMT5	50	87.008	Dasypus_novemcinctus
ENSPCAG00000006616	-	54	89.189	ENSDORG00000015555	Trmt5	52	89.189	Dipodomys_ordii
ENSPCAG00000006616	-	52	49.027	FBgn0052281	CG32281	56	49.027	Drosophila_melanogaster
ENSPCAG00000006616	-	54	91.860	ENSEASG00005016123	TRMT5	51	91.860	Equus_asinus_asinus
ENSPCAG00000006616	-	54	92.636	ENSECAG00000000057	TRMT5	51	92.636	Equus_caballus
ENSPCAG00000006616	-	53	61.328	ENSELUG00000011314	trmt5	51	61.328	Esox_lucius
ENSPCAG00000006616	-	54	90.734	ENSFCAG00000006820	TRMT5	50	90.734	Felis_catus
ENSPCAG00000006616	-	54	85.714	ENSFDAG00000018556	TRMT5	51	85.714	Fukomys_damarensis
ENSPCAG00000006616	-	53	60.000	ENSFHEG00000008062	trmt5	53	60.000	Fundulus_heteroclitus
ENSPCAG00000006616	-	53	59.608	ENSGMOG00000010858	trmt5	58	59.608	Gadus_morhua
ENSPCAG00000006616	-	52	71.937	ENSGALG00000011904	TRMT5	51	71.937	Gallus_gallus
ENSPCAG00000006616	-	53	60.630	ENSGAFG00000004103	trmt5	55	60.630	Gambusia_affinis
ENSPCAG00000006616	-	54	59.924	ENSGACG00000008470	trmt5	90	59.924	Gasterosteus_aculeatus
ENSPCAG00000006616	-	53	74.902	ENSGAGG00000023507	TRMT5	51	74.902	Gopherus_agassizii
ENSPCAG00000006616	-	54	89.535	ENSGGOG00000006831	TRMT5	51	89.535	Gorilla_gorilla
ENSPCAG00000006616	-	53	59.216	ENSHBUG00000023000	trmt5	53	59.216	Haplochromis_burtoni
ENSPCAG00000006616	-	54	85.714	ENSHGLG00000013713	TRMT5	57	85.714	Heterocephalus_glaber_female
ENSPCAG00000006616	-	54	85.714	ENSHGLG00100002392	TRMT5	53	85.714	Heterocephalus_glaber_male
ENSPCAG00000006616	-	52	59.127	ENSHCOG00000012203	trmt5	60	59.127	Hippocampus_comes
ENSPCAG00000006616	-	53	57.198	ENSIPUG00000002612	trmt5	53	56.923	Ictalurus_punctatus
ENSPCAG00000006616	-	54	90.347	ENSSTOG00000011865	TRMT5	52	90.347	Ictidomys_tridecemlineatus
ENSPCAG00000006616	-	54	84.884	ENSJJAG00000009935	Trmt5	60	84.884	Jaculus_jaculus
ENSPCAG00000006616	-	54	59.302	ENSKMAG00000005992	trmt5	59	59.302	Kryptolebias_marmoratus
ENSPCAG00000006616	-	53	60.630	ENSLBEG00000023240	trmt5	58	60.630	Labrus_bergylta
ENSPCAG00000006616	-	53	68.872	ENSLACG00000018464	TRMT5	57	68.872	Latimeria_chalumnae
ENSPCAG00000006616	-	52	63.780	ENSLOCG00000010120	trmt5	56	63.780	Lepisosteus_oculatus
ENSPCAG00000006616	-	54	92.278	ENSLAFG00000003616	TRMT5	51	92.278	Loxodonta_africana
ENSPCAG00000006616	-	54	87.597	ENSMFAG00000002940	TRMT5	50	87.597	Macaca_fascicularis
ENSPCAG00000006616	-	54	87.984	ENSMNEG00000000131	TRMT5	50	87.984	Macaca_nemestrina
ENSPCAG00000006616	-	54	88.372	ENSMLEG00000043649	TRMT5	50	88.372	Mandrillus_leucophaeus
ENSPCAG00000006616	-	53	60.236	ENSMAMG00000001758	trmt5	51	60.236	Mastacembelus_armatus
ENSPCAG00000006616	-	53	57.647	ENSMZEG00005007457	trmt5	53	57.647	Maylandia_zebra
ENSPCAG00000006616	-	52	72.727	ENSMGAG00000013565	TRMT5	50	72.727	Meleagris_gallopavo
ENSPCAG00000006616	-	54	82.239	ENSMAUG00000016091	Trmt5	52	82.239	Mesocricetus_auratus
ENSPCAG00000006616	-	54	88.803	ENSMICG00000044351	TRMT5	51	88.803	Microcebus_murinus
ENSPCAG00000006616	-	54	84.170	ENSMOCG00000020904	Trmt5	52	84.170	Microtus_ochrogaster
ENSPCAG00000006616	-	53	62.598	ENSMMOG00000012159	trmt5	52	62.598	Mola_mola
ENSPCAG00000006616	-	54	77.907	ENSMODG00000008664	TRMT5	51	77.907	Monodelphis_domestica
ENSPCAG00000006616	-	53	61.024	ENSMALG00000009533	trmt5	52	61.024	Monopterus_albus
ENSPCAG00000006616	-	54	82.625	MGP_CAROLIEiJ_G0017843	Trmt5	51	82.625	Mus_caroli
ENSPCAG00000006616	-	54	83.012	ENSMUSG00000034442	Trmt5	51	83.012	Mus_musculus
ENSPCAG00000006616	-	54	82.625	MGP_PahariEiJ_G0029601	Trmt5	51	82.625	Mus_pahari
ENSPCAG00000006616	-	54	83.012	MGP_SPRETEiJ_G0018690	Trmt5	51	83.012	Mus_spretus
ENSPCAG00000006616	-	54	89.961	ENSMLUG00000002357	TRMT5	51	89.961	Myotis_lucifugus
ENSPCAG00000006616	-	53	86.614	ENSNGAG00000012691	Trmt5	51	86.614	Nannospalax_galili
ENSPCAG00000006616	-	53	58.824	ENSNBRG00000009536	trmt5	58	58.824	Neolamprologus_brichardi
ENSPCAG00000006616	-	54	89.147	ENSNLEG00000013805	TRMT5	51	89.147	Nomascus_leucogenys
ENSPCAG00000006616	-	54	61.628	ENSMEUG00000004767	-	82	61.628	Notamacropus_eugenii
ENSPCAG00000006616	-	53	81.250	ENSODEG00000013922	TRMT5	53	81.250	Octodon_degus
ENSPCAG00000006616	-	54	84.109	ENSOCUG00000014281	TRMT5	51	84.109	Oryctolagus_cuniculus
ENSPCAG00000006616	-	52	58.333	ENSORLG00000015734	trmt5	52	58.333	Oryzias_latipes
ENSPCAG00000006616	-	52	58.333	ENSORLG00020009860	trmt5	52	58.333	Oryzias_latipes_hni
ENSPCAG00000006616	-	52	58.730	ENSORLG00015008653	trmt5	60	58.730	Oryzias_latipes_hsok
ENSPCAG00000006616	-	52	59.127	ENSOMEG00000006629	trmt5	52	59.127	Oryzias_melastigma
ENSPCAG00000006616	-	54	89.189	ENSOGAG00000016088	TRMT5	51	89.189	Otolemur_garnettii
ENSPCAG00000006616	-	54	91.860	ENSOARG00000021132	TRMT5	51	91.860	Ovis_aries
ENSPCAG00000006616	-	54	89.535	ENSPPAG00000035176	TRMT5	51	89.535	Pan_paniscus
ENSPCAG00000006616	-	54	90.734	ENSPPRG00000013336	TRMT5	51	90.734	Panthera_pardus
ENSPCAG00000006616	-	54	89.535	ENSPTRG00000006415	TRMT5	51	89.535	Pan_troglodytes
ENSPCAG00000006616	-	54	88.372	ENSPANG00000016605	TRMT5	50	88.372	Papio_anubis
ENSPCAG00000006616	-	54	61.069	ENSPKIG00000018196	trmt5	57	61.069	Paramormyrops_kingsleyae
ENSPCAG00000006616	-	54	75.194	ENSPSIG00000014128	TRMT5	51	75.194	Pelodiscus_sinensis
ENSPCAG00000006616	-	54	81.467	ENSPEMG00000022664	Trmt5	52	81.467	Peromyscus_maniculatus_bairdii
ENSPCAG00000006616	-	54	77.519	ENSPCIG00000020458	TRMT5	50	77.519	Phascolarctos_cinereus
ENSPCAG00000006616	-	53	60.630	ENSPFOG00000008680	trmt5	58	60.630	Poecilia_formosa
ENSPCAG00000006616	-	53	60.630	ENSPLAG00000014197	trmt5	54	60.630	Poecilia_latipinna
ENSPCAG00000006616	-	53	60.700	ENSPMEG00000014848	trmt5	53	60.700	Poecilia_mexicana
ENSPCAG00000006616	-	53	61.024	ENSPREG00000015503	trmt5	59	61.024	Poecilia_reticulata
ENSPCAG00000006616	-	54	88.760	ENSPPYG00000005877	TRMT5	50	88.760	Pongo_abelii
ENSPCAG00000006616	-	54	89.575	ENSPCOG00000017447	TRMT5	51	89.575	Propithecus_coquereli
ENSPCAG00000006616	-	54	89.961	ENSPVAG00000015311	TRMT5	51	89.961	Pteropus_vampyrus
ENSPCAG00000006616	-	53	58.824	ENSPNYG00000022005	trmt5	58	58.824	Pundamilia_nyererei
ENSPCAG00000006616	-	53	61.628	ENSPNAG00000022427	trmt5	52	61.628	Pygocentrus_nattereri
ENSPCAG00000006616	-	54	81.081	ENSRNOG00000007785	Trmt5	57	81.081	Rattus_norvegicus
ENSPCAG00000006616	-	54	89.147	ENSRBIG00000033903	TRMT5	50	89.147	Rhinopithecus_bieti
ENSPCAG00000006616	-	54	89.147	ENSRROG00000035334	TRMT5	50	89.147	Rhinopithecus_roxellana
ENSPCAG00000006616	-	52	37.874	YHR070W	-	60	37.874	Saccharomyces_cerevisiae
ENSPCAG00000006616	-	54	87.984	ENSSBOG00000027786	TRMT5	53	87.984	Saimiri_boliviensis_boliviensis
ENSPCAG00000006616	-	54	78.295	ENSSHAG00000003232	TRMT5	52	78.295	Sarcophilus_harrisii
ENSPCAG00000006616	-	52	58.824	ENSSFOG00015013093	trmt5	58	58.824	Scleropages_formosus
ENSPCAG00000006616	-	53	59.449	ENSSMAG00000001616	trmt5	52	59.449	Scophthalmus_maximus
ENSPCAG00000006616	-	52	61.905	ENSSDUG00000019541	trmt5	51	61.905	Seriola_dumerili
ENSPCAG00000006616	-	52	61.111	ENSSLDG00000001680	trmt5	57	61.111	Seriola_lalandi_dorsalis
ENSPCAG00000006616	-	54	87.597	ENSSARG00000012431	TRMT5	51	87.597	Sorex_araneus
ENSPCAG00000006616	-	53	69.804	ENSSPUG00000010098	TRMT5	51	69.804	Sphenodon_punctatus
ENSPCAG00000006616	-	53	60.630	ENSSPAG00000012940	trmt5	53	60.630	Stegastes_partitus
ENSPCAG00000006616	-	54	91.473	ENSSSCG00000024529	TRMT5	52	91.473	Sus_scrofa
ENSPCAG00000006616	-	52	69.170	ENSTGUG00000012988	TRMT5	53	69.170	Taeniopygia_guttata
ENSPCAG00000006616	-	53	61.719	ENSTRUG00000010888	trmt5	55	61.719	Takifugu_rubripes
ENSPCAG00000006616	-	54	61.240	ENSTNIG00000017342	trmt5	58	61.240	Tetraodon_nigroviridis
ENSPCAG00000006616	-	54	88.417	ENSTBEG00000005659	TRMT5	51	88.417	Tupaia_belangeri
ENSPCAG00000006616	-	54	90.698	ENSTTRG00000013839	TRMT5	51	90.698	Tursiops_truncatus
ENSPCAG00000006616	-	54	91.120	ENSUAMG00000023288	TRMT5	52	91.120	Ursus_americanus
ENSPCAG00000006616	-	54	86.873	ENSUMAG00000013736	TRMT5	58	86.873	Ursus_maritimus
ENSPCAG00000006616	-	54	88.803	ENSVPAG00000002392	TRMT5	51	88.803	Vicugna_pacos
ENSPCAG00000006616	-	54	89.189	ENSVVUG00000029464	TRMT5	52	89.189	Vulpes_vulpes
ENSPCAG00000006616	-	52	65.613	ENSXETG00000014455	trmt5	51	65.613	Xenopus_tropicalis
ENSPCAG00000006616	-	53	60.156	ENSXCOG00000008547	trmt5	55	60.156	Xiphophorus_couchianus
ENSPCAG00000006616	-	53	60.156	ENSXMAG00000013474	trmt5	56	60.156	Xiphophorus_maculatus